FFCP PHASE1:Mm9::chr9:46050533..46050543,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=191 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:46050533..46050543,+ | |||
|description=CAGE_peak_at_chr9:46050533..46050543,+ | |description=CAGE_peak_at_chr9:46050533..46050543,+ | ||
|id=chr9:46050533..46050543,+ | |id=chr9:46050533..46050543,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.33e-10!6;CL:0000677!1.33e-10!6;CL:0000212!1.33e-10!6;CL:0000584!1.33e-10!6;CL:0000066!4.31e-09!25;CL:0000075!6.12e-09!7;CL:0002563!8.04e-09!9;CL:0002251!8.04e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.79e-19,6;CL:0000677,1.79e-19,6;CL:0000584,1.79e-19,6;CL:0000075,1.28e-16,7;CL:0002563,8.33e-13,9;CL:0002251,8.33e-13,9;CL:0000066,7.04e-12,25;CL:0000682,2.16e-11,3;CL:0002076,1.87e-07,15;CL:0000223,2.66e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.03e-19!43;UBERON:0005409!3.62e-18!59;UBERON:0000344!7.41e-15!15;UBERON:0001242!1.15e-11!13;UBERON:0000060!1.15e-11!13;UBERON:0001262!1.15e-11!13;UBERON:0004786!1.15e-11!13;UBERON:0004923!4.18e-11!24;UBERON:0001007!3.26e-10!128;UBERON:0001555!3.26e-10!128;UBERON:0007026!3.26e-10!128;UBERON:0004119!6.69e-10!130;UBERON:0000925!6.69e-10!130;UBERON:0006595!6.69e-10!130;UBERON:0003350!8.04e-09!9;UBERON:0004808!8.04e-09!9;UBERON:0001277!8.04e-09!9;UBERON:0004921!1.03e-08!126;UBERON:0004185!1.03e-08!126;UBERON:0000485!5.68e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.98e-39,31;UBERON:0005409,2.78e-24,47;UBERON:0000344,6.87e-21,15;UBERON:0001242,4.00e-15,13;UBERON:0001262,4.00e-15,13;UBERON:0004786,4.00e-15,13;UBERON:0004923,5.23e-15,24;UBERON:0003350,8.33e-13,9;UBERON:0004808,8.33e-13,9;UBERON:0001277,8.33e-13,9;UBERON:0001007,4.96e-11,116;UBERON:0001555,4.96e-11,116;UBERON:0007026,4.96e-11,116;UBERON:0004119,9.06e-11,118;UBERON:0000925,9.06e-11,118;UBERON:0006595,9.06e-11,118;UBERON:0000485,2.24e-10,11;UBERON:0004921,8.87e-09,114;UBERON:0001962,1.73e-08,2;UBERON:0001961,1.73e-08,2;UBERON:0001744,1.73e-08,2 | |||
|phase1_expression=0,11.1672130444596,16.3799726180233,2.41971369045464,1.50268718983904,1.6787927191189,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1992801653736,18.8115610475079,9.76194338995534,6.03066794622705,10.1271479362368,0.570070258369122,0,1.55211357458713,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,4.0798280022465,0.539703191637817,0,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,2.71914464507811,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,3.96675849995316,0,0,0,0.80673409849337,1.11189021922435,1.33157938278791,5.21981967698963,7.74085087202851,6.78605063760728,6.36660710531683,4.28920991662064,3.59527763461689,1.94524244887225,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08073171281791,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.269728692769641,0.0826534557253359,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,11.1672130444596,16.3799726180233,2.41971369045464,1.50268718983904,1.6787927191189,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1992801653736,18.8115610475079,9.76194338995534,6.03066794622705,10.1271479362368,0.570070258369122,0,1.55211357458713,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,4.0798280022465,0.539703191637817,0,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,2.71914464507811,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,3.96675849995316,0,0,0,0.80673409849337,1.11189021922435,1.33157938278791,5.21981967698963,7.74085087202851,6.78605063760728,6.36660710531683,4.28920991662064,3.59527763461689,1.94524244887225,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08073171281791,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.269728692769641,0.0826534557253359,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr9:46050533..46050543,+ | |short_description=p@chr9:46050533..46050543,+ | ||
}} | }} |
Latest revision as of 05:36, 5 August 2015
Short description: | p@chr9:46050533..46050543, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46050533..46050543, + |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.79e-19 | 6 |
gut absorptive cell | 1.79e-19 | 6 |
enterocyte | 1.79e-19 | 6 |
columnar/cuboidal epithelial cell | 1.28e-16 | 7 |
intestinal epithelial cell | 8.33e-13 | 9 |
epithelial cell of alimentary canal | 8.33e-13 | 9 |
epithelial cell | 7.04e-12 | 25 |
M cell of gut | 2.16e-11 | 3 |
endo-epithelial cell | 1.87e-07 | 15 |
endodermal cell | 2.66e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.98e-39 | 31 |
gastrointestinal system | 2.78e-24 | 47 |
mucosa | 6.87e-21 | 15 |
intestinal mucosa | 4.00e-15 | 13 |
wall of intestine | 4.00e-15 | 13 |
gastrointestinal system mucosa | 4.00e-15 | 13 |
organ component layer | 5.23e-15 | 24 |
epithelium of mucosa | 8.33e-13 | 9 |
gastrointestinal system epithelium | 8.33e-13 | 9 |
intestinal epithelium | 8.33e-13 | 9 |
digestive system | 4.96e-11 | 116 |
digestive tract | 4.96e-11 | 116 |
primitive gut | 4.96e-11 | 116 |
endoderm-derived structure | 9.06e-11 | 118 |
endoderm | 9.06e-11 | 118 |
presumptive endoderm | 9.06e-11 | 118 |
simple columnar epithelium | 2.24e-10 | 11 |
subdivision of digestive tract | 8.87e-09 | 114 |
gut-associated lymphoid tissue | 1.73e-08 | 2 |
mucosa-associated lymphoid tissue | 1.73e-08 | 2 |
lymphoid tissue | 1.73e-08 | 2 |