FFCP PHASE1:Mm9::chr18:65200384..65200395,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=397 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:65200384..65200395,- | |||
|description=CAGE_peak_at_chr18:65200384..65200395,- | |description=CAGE_peak_at_chr18:65200384..65200395,- | ||
|id=chr18:65200384..65200395,- | |id=chr18:65200384..65200395,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,8.52e-21,3;CL:0000239,1.80e-18,6;CL:0000677,1.80e-18,6;CL:0000584,1.80e-18,6;CL:0000075,6.98e-16,7;CL:0000066,7.96e-13,25;CL:0002563,2.02e-12,9;CL:0002251,2.02e-12,9;CL:0000473,2.89e-09,7;CL:0002076,1.51e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.08e-10!22;UBERON:0007499!1.08e-10!22;UBERON:0006925!1.08e-10!22;UBERON:0009497!1.08e-10!22;UBERON:0000015!1.08e-10!22;UBERON:0002423!1.08e-10!22;UBERON:0006235!1.08e-10!22;UBERON:0008835!1.08e-10!22;UBERON:0003894!1.08e-10!22;UBERON:0004161!1.08e-10!22;UBERON:0008836!1.08e-10!22;UBERON:0009854!4.64e-10!23;UBERON:0009856!4.64e-10!23;UBERON:0002365!5.92e-09!25;UBERON:0002330!5.92e-09!25;UBERON:0000344!1.62e-07!15 | |ontology_enrichment_uberon=UBERON:0002107!1.08e-10!22;UBERON:0007499!1.08e-10!22;UBERON:0006925!1.08e-10!22;UBERON:0009497!1.08e-10!22;UBERON:0000015!1.08e-10!22;UBERON:0002423!1.08e-10!22;UBERON:0006235!1.08e-10!22;UBERON:0008835!1.08e-10!22;UBERON:0003894!1.08e-10!22;UBERON:0004161!1.08e-10!22;UBERON:0008836!1.08e-10!22;UBERON:0009854!4.64e-10!23;UBERON:0009856!4.64e-10!23;UBERON:0002365!5.92e-09!25;UBERON:0002330!5.92e-09!25;UBERON:0000344!1.62e-07!15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.05e-22,15;UBERON:0001962,2.94e-15,2;UBERON:0001961,2.94e-15,2;UBERON:0001744,2.94e-15,2;UBERON:0004923,1.63e-13,24;UBERON:0001242,5.75e-13,13;UBERON:0001262,5.75e-13,13;UBERON:0004786,5.75e-13,13;UBERON:0003350,2.02e-12,9;UBERON:0004808,2.02e-12,9;UBERON:0001277,2.02e-12,9;UBERON:0002465,1.75e-10,3;UBERON:0000485,3.27e-10,11;UBERON:0003199,2.16e-08,1 | |||
|phase1_expression=0,5.58360652222978,4.54999239389536,0,0,1.6787927191189,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,6.23970448894286,5.04700418347774,1.72269589234506,2.15380998079537,3.44753972297422,0.190023419456374,0.252030129759931,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0.166845105716094,0.393117990226406,0.674586337154561,0.405720242777006,0.964708639009667,0.763877555344259,2.01387296215567,0.162135226775035,0.274561413188081,4.31304619582064,1.86070473834252,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0,0,0.468207537349412,0,0.229741875822453,0.952587382566147,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,5.58360652222978,4.54999239389536,0,0,1.6787927191189,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,6.23970448894286,5.04700418347774,1.72269589234506,2.15380998079537,3.44753972297422,0.190023419456374,0.252030129759931,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0.166845105716094,0.393117990226406,0.674586337154561,0.405720242777006,0.964708639009667,0.763877555344259,2.01387296215567,0.162135226775035,0.274561413188081,4.31304619582064,1.86070473834252,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0,0,0.468207537349412,0,0.229741875822453,0.952587382566147,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr18:65200384..65200395,- | |short_description=p@chr18:65200384..65200395,- | ||
}} | }} |
Latest revision as of 00:44, 6 August 2015
Short description: | p@chr18:65200384..65200395, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:65200384..65200395, - |
Coexpression cluster: | MCL_coexpression_mm9:397 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 8.52e-21 | 3 |
brush border epithelial cell | 1.80e-18 | 6 |
gut absorptive cell | 1.80e-18 | 6 |
enterocyte | 1.80e-18 | 6 |
columnar/cuboidal epithelial cell | 6.98e-16 | 7 |
epithelial cell | 7.96e-13 | 25 |
intestinal epithelial cell | 2.02e-12 | 9 |
epithelial cell of alimentary canal | 2.02e-12 | 9 |
defensive cell | 2.89e-09 | 7 |
endo-epithelial cell | 1.51e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 7.05e-22 | 15 |
gut-associated lymphoid tissue | 2.94e-15 | 2 |
mucosa-associated lymphoid tissue | 2.94e-15 | 2 |
lymphoid tissue | 2.94e-15 | 2 |
organ component layer | 1.63e-13 | 24 |
intestinal mucosa | 5.75e-13 | 13 |
wall of intestine | 5.75e-13 | 13 |
gastrointestinal system mucosa | 5.75e-13 | 13 |
epithelium of mucosa | 2.02e-12 | 9 |
gastrointestinal system epithelium | 2.02e-12 | 9 |
intestinal epithelium | 2.02e-12 | 9 |
lymphoid system | 1.75e-10 | 3 |
simple columnar epithelium | 3.27e-10 | 11 |
egg chamber | 2.16e-08 | 1 |