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FFCP PHASE1:Mm9::chr7:31912012..31912061,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20266
|EntrezGene=20266
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P97952
|UniProt=P97952
|association_with_transcript=-48bp_to_ENSMUST00000098548,NM_011322,uc009gie.1_5end
|association_with_transcript=-48bp_to_ENSMUST00000098548,NM_011322,uc009gie.1_5end
|cluster_id=chr7:31912012..31912061,-
|description=CAGE_peak_1_at_Scn1b_5end
|description=CAGE_peak_1_at_Scn1b_5end
|id=chr7:31912012..31912061,-
|id=chr7:31912012..31912061,-
|ontology_enrichment_celltype=CL:0000055!2.90e-09!50;CL:0002319!1.67e-07!43;CL:0000221!1.84e-07!44;CL:0000133!1.84e-07!44
|ontology_enrichment_celltype=CL:0000055!2.90e-09!50;CL:0002319!1.67e-07!43;CL:0000221!1.84e-07!44;CL:0000133!1.84e-07!44
|ontology_enrichment_celltype_v019_2=CL:0002319,1.86e-07,43;CL:0000221,2.04e-07,44;CL:0000133,2.04e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!6.05e-20!75;UBERON:0001016!6.05e-20!75;UBERON:0001017!9.89e-20!73;UBERON:0005743!9.89e-20!73;UBERON:0004121!1.83e-17!102;UBERON:0000924!1.83e-17!102;UBERON:0006601!1.83e-17!102;UBERON:0001049!3.61e-14!52;UBERON:0005068!3.61e-14!52;UBERON:0006241!3.61e-14!52;UBERON:0007135!3.61e-14!52;UBERON:0000955!7.89e-14!50;UBERON:0006238!7.89e-14!50;UBERON:0002616!2.42e-13!49;UBERON:0000033!2.46e-12!63;UBERON:0002346!6.25e-11!71;UBERON:0003075!6.25e-11!71;UBERON:0007284!6.25e-11!71;UBERON:0002020!1.68e-09!34;UBERON:0003080!1.11e-08!40;UBERON:0004111!1.82e-08!122;UBERON:0002780!3.40e-08!39;UBERON:0001890!3.40e-08!39;UBERON:0006240!3.40e-08!39;UBERON:0002791!1.15e-07!29;UBERON:0003528!1.15e-07!29;UBERON:0001893!1.15e-07!29;UBERON:0002021!2.16e-07!10;UBERON:0000411!2.16e-07!10;UBERON:0001950!2.16e-07!10;UBERON:0000025!3.56e-07!114;UBERON:0003076!4.79e-07!12;UBERON:0003057!4.79e-07!12;UBERON:0002619!8.21e-07!17;UBERON:0003056!9.76e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.88e-20,75;UBERON:0001017,8.05e-20,73;UBERON:0004121,2.13e-18,95;UBERON:0000924,2.13e-18,95;UBERON:0006601,2.13e-18,95;UBERON:0000073,2.16e-15,54;UBERON:0001049,3.52e-14,52;UBERON:0005068,3.52e-14,52;UBERON:0006241,3.52e-14,52;UBERON:0007135,3.52e-14,52;UBERON:0010371,1.57e-12,73;UBERON:0000955,4.37e-12,47;UBERON:0006238,4.37e-12,47;UBERON:0002346,7.73e-12,64;UBERON:0003075,7.73e-12,64;UBERON:0007284,7.73e-12,64;UBERON:0002616,1.30e-11,46;UBERON:0010314,4.83e-11,92;UBERON:0002020,1.90e-09,34;UBERON:0003080,1.23e-08,40;UBERON:0002780,3.81e-08,39;UBERON:0001890,3.81e-08,39;UBERON:0006240,3.81e-08,39;UBERON:0004111,4.72e-08,122;UBERON:0003528,1.36e-07,29;UBERON:0002791,1.36e-07,29;UBERON:0001893,1.36e-07,29;UBERON:0002021,1.75e-07,10;UBERON:0000411,1.75e-07,10;UBERON:0001950,1.75e-07,10;UBERON:0003076,3.93e-07,12;UBERON:0003057,3.93e-07,12;UBERON:0000025,8.79e-07,114;UBERON:0003056,9.39e-07,49
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|phase1_expression=6.56610273129655,0,0,0,0.500895729946347,0.16787927191189,0.467225281191051,1.54947988129892,3.51971805379167,11.9372908424217,1.19852577757853,4.30769658574817,0,0.0874204024189974,1.33243904726265,1.41732687172878,1.39912375625629,0.473193248037357,0.548457734422955,0,35.378008702845,0.297872853602656,0.261199789138935,0.159992422793407,0.68822784320151,0,0,0.430942465371778,0.950117097281869,0.504060259519861,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,15.485308610996,17.538209100976,9.36088436024576,61.0265248591471,5.88667922227206,32.5135550447018,14.9711022287198,16.6583841734181,10.062679505548,0.335565212115473,0,0,15.4355661621568,25.5014761545493,27.3306208907044,4.04632921719196,5.28990979272033,5.07065122804943,38.9671211879502,24.0109594950008,45.8948855813513,48.4544517657817,54.7069688508497,35.6524131516902,36.5007390055477,1.14058573539325,1.62007125998029,1.05162480675691,45.4185065202048,34.2346238475001,1.5923803897944,1.72521847832825,0.919218786610021,103.508928139425,147.606562826477,112.900801943339,2.63772575460388,3.11057988248193,2.08365348222704,168.905714395835,86.102679334847,83.5806415339151,21.2132581541041,18.3659468230843,6.71038004971082,2.80186915332781,6.8014404096107,4.63783181922684,1.72084775396277,6.79971333707751,2.15881276655127,1.29955283489534,0,54.7733238513832,8.52151612890289,10.9110121933205,15.9002808529653,2.81686839553361,3.84979432242953,2.54805239706646,0,2.16491041011214,3.54703811665138,2.52762222507392,13.1311461676919,1.55362730188303,6.82833839698194,2.25530924795977,0.913396434936424,1.38369298353635,1.95939432718409,2.3517741427141,3.64433114856059,0.494389935468748,18.2195189719089,19.4614321428972,10.1913115466868,39.5306318044104,33.9412677194656,1.86391761218122,170.983985454744,193.738203802446,2.29911349687732,1.1981512450592,0.599902730993408,0.762421362438388,94.8174747432528,82.8076091101714,9.42407640846483,148.09832080382,130.926314153129,98.2837450766719,82.7430441645564,3.25885964321012,21.7712198567663,2.0217820674694,14.5204880561667,0.260240885925407,1.14951052216736,0.180062129805349,1.65775299619287,1.49680298132921,1.66547836370305,2.34254311399322,10.0894314588216,0,1.13463648100692,1.40760899331159,2.6303487891309,1.39023624612799,2.089512999133,1.85203922767149,0.796137067273973,0.702213187313235,0,0,1.03562886267751,0.703578179943289,1.80062061461015,1.18372367792605,1.37734962223183,1.69693824176116,1.62773761325285,1.07309360559848,1.98501082024188,2.46839774870221,4.26835406605648,4.86412857275134,5.55559952216263,6.58650345873152,9.12603647570528,126.804838984169,9.05560588937703,0.330418782983798,1.32225283331772,0.213288250535234,0.464473343720877,0.515469845288373,1.00841762311671,0.22237804384487,0.951128130562796,1.89811624617805,0.988193728344065,1.50801125280162,1.39269530428806,2.53453313254856,1.79763881730844,2.59365659849633,2.19055400579804,0.569003702859245,0.685491075658373,2.25415471346161,0,0.969762435838129,0.631222379012867,1.39120381673366,1.91893192373483,4.70996183524124,5.42947521255922,3.55743152504579,0.166845105716094,0.589676985339609,0.674586337154561,1.42002084971952,1.20588579876208,1.2731292589071,1.72617682470486,1.45921704097532,0.549122826376163,1.43768206527355,3.72140947668503,3.43241440426017,2.77836765741823,3.04975602987251,0.964887042726734,4.24932337383191,0.947457058852424,0.162964976442026,0.678980343100753,0.704070744865506,0,0.952174563544055,1.17080188714679,1.10344600874334,1.10732344824387,1.2756381492599,3.27726629431476,3.62638461918381,2.89298117163023,1.50791283939272,8.15858525728064,3.44234991113325,2.75936746304733,136.789102669599,111.116678889409,4.26230857979356,204.248980108338,3.47059041357882,3.51394869866975,3.01592756825919,5.25731355495614,6.46116154838943,3.96307143104365,2.02405350837447,6.72188473196017,3.55759000151871,42.4144137676785,3.69044221541498,4.09550888434687,3.58351310577867,3.79431282836832,1.32745138339963,0.242780636154981,0.604647113929502,0.565815239267694,2.06711325016541,1.22974059177571,1.29214146584111,3.27180356529755,1.06949213515416,1.8962205476149,2.10837217149998,4.12542172992747,11.9153862013826,1.08036656418786,1.55230420539305,1.50035924522115,2.12808280370728,7.13475270408282,5.59466670047211,6.08929898229199,2.58138878870081,1.27099242518292,3.08739757276947,21.4352128823924,3.22928853391811,3.1362720962641,2.86493625607528,3.28281799490123,1.7488850197791,117.003365568632,5.29699730473343,1.44470807574256,2.40752885580625,2.0720530270516,1.23024804948923,3.43167259809784,10.7086410896129,7.83728133012485,13.2671974852247,6.68269432610579,0,1.01659733563424,1.08005340821801,1.04544148007234,0.218362563746178,1.34864346384821,2.14898984885873,4.97336289769656,2.98114438571124,21.7468759580424,0.56369293868419,0.598066184175915,0.330916980914195,1.36115831840833,0.258319646955462,0.675824501963113,0.821500670520278,1.5624526181274,0.209718688851422,0.483168241652012,19.8740704317927,2.21207784439725,0.810900861160657,1.74608627180206,1.68897069871134,0,0.39736270956253,0.721172697119813,1.18151621739662,0.807731599585181,0.457240839929999,0.302478555410522,1.46186821109629,0.481059208201647,1.16876902181569,75.2744873602502,19.3127779435436,9.15081337416652,28.0367309328011,8.50034213741638,9.57180624801028,5.86085197655248,6.21668299329291,2.00628841614145,56.4751842617067,58.9216302729186,65.8829840455306,78.1931979663779,128.11043119711,125.39538696669,128.929297544275,152.208566689787,136.395865104246,155.328093525546,0.415149390336707,0.798049746802062,1.70733605754134,1.70174701947806,0.838452650511929,2.94149613520023,3.11145418922261,3.5025959730612,1.92551525755089,2.52697211763797,1.52087579934144,3.01802146217722,3.37109426891577,3.20125762024346,2.92920891673628,2.85776214769844,3.24476112645595,3.47236596834669,4.94503080963968,2.50238164228475,1.37147700954166,3.90446773550542,2.62279808942053,2.76158191601424,2.82328141245992,2.96151127620868,5.48783918618318,2.63069711437843,2.44447404922551,5.05028044491965,3.44041552560105,4.0386837773981,3.27384834535751,2.47898945897546,2.70069255373598,4.24677982494508,4.91256377735358,3.00819475667618,3.63447830930802,22.7209161693101,29.9109507950344
|short_description=p1@Scn1b
|short_description=p1@Scn1b
}}
}}

Latest revision as of 15:45, 26 September 2015

Short description:p1@Scn1b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Scn1b_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -48bp_to_ENSMUST00000098548, NM_011322, uc009gie.1_5end
EntrezGene:Scn1b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Scn1b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A335.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D815.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D917.54
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.36
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B761.03
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.89
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B832.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.44
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E125.50
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C527.33
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C638.97
Mouse Meningeal cells, donor3.CNhs12109.11639-122D124.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C745.89
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E748.45
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D254.71
Mouse Microglia, donor1.CNhs12629.11718-123C835.65
Mouse Microglia, donor2.CNhs12634.11736-123E836.50
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F145.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D534.23
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3103.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3147.61
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7112.90
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4168.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E586.10
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I683.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D621.21
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.37
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D92.80
Mouse Schwann, donor2.CNhs12573.11746-123F96.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A754.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I815.90
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.13
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D76.83
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C12.35
adrenal gland, neonate N25.CNhs11223.1377-27I33.64
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H118.22
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F510.19
bone (os femoris), neonate N16.CNhs11225.1525-43A639.53
bone (os femoris), neonate N20.CNhs11195.1350-25C333.94
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B2170.98
cerebellum, neonate N30.CNhs11135.1395-42I2193.74
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A494.82
corpus striatum, adult.CNhs10487.19-21D882.81
corpus striatum, neonate N00.CNhs11226.630-43F19.42
cortex, adult.CNhs10473.12-14D5148.10
cortex, neonate N30.CNhs11107.1392-42F2130.93
diencephalon, adult.CNhs10482.20-12F298.28
diencephalon, neonate N30.CNhs11201.1388-42B282.74
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.26
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A221.77
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G414.52
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A210.09
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G14.86
heart, neonate N20.CNhs11127.821-26I65.56
heart, neonate N25.CNhs11196.1351-25D36.59
heart, neonate N30.CNhs11202.1390-42D29.13
hippocampus, adult.CNhs10478.13-16E8126.80
hippocampus, neonate N00.CNhs11228.627-43G19.06
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F34.71
kidney, neonate N30.CNhs11203.1385-42H15.43
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H13.05
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B14.25
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C73.63
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.16
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C2136.79
medulla oblongata, neonate N30.CNhs11200.1396-42A3111.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2204.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.72
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I942.41
ovary, adult.CNhs10507.91-2I73.69
ovary, embryo E18.CNhs11040.505-44H74.10
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G811.92
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F67.13
pituitary gland, embryo E17.CNhs11039.1265-44F55.59
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F83.09
skin, adult.CNhs10492.30-1C321.44
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H33.14
skin, neonate N06.CNhs11097.693-20I52.86
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C9117.00
spleen, adult.CNhs10465.25-2G25.30
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.27
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A92.15
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I12.98
submandibular gland, adult.CNhs10469.59-29C121.75
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E219.87
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B475.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.31
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.15
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G528.04
urinary bladder, adult.CNhs10481.879-12E48.50
uterus, adult pregnant day19.CNhs10497.590-15F59.57
uterus, adult.CNhs10509.92-27E55.86
vagina, adult.CNhs10502.89-27D56.22
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A156.48
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A258.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A365.88
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D778.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4128.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5125.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6128.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7152.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8136.40
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9155.33
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D122.72
whole body, neonate N10.CNhs10518.761-6B429.91





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.86e-0743
ectodermal cell2.04e-0744
neurectodermal cell2.04e-0744

Uber anatomy
Ontology termp-valuen
nervous system4.88e-2075
central nervous system8.05e-2073
ectoderm-derived structure2.13e-1895
ectoderm2.13e-1895
presumptive ectoderm2.13e-1895
regional part of nervous system2.16e-1554
neural tube3.52e-1452
neural rod3.52e-1452
future spinal cord3.52e-1452
neural keel3.52e-1452
ecto-epithelium1.57e-1273
brain4.37e-1247
future brain4.37e-1247
neurectoderm7.73e-1264
neural plate7.73e-1264
presumptive neural plate7.73e-1264
regional part of brain1.30e-1146
structure with developmental contribution from neural crest4.83e-1192
gray matter1.90e-0934
anterior neural tube1.23e-0840
regional part of forebrain3.81e-0839
forebrain3.81e-0839
future forebrain3.81e-0839
anatomical conduit4.72e-08122
brain grey matter1.36e-0729
regional part of telencephalon1.36e-0729
telencephalon1.36e-0729
occipital lobe1.75e-0710
visual cortex1.75e-0710
neocortex1.75e-0710
posterior neural tube3.93e-0712
chordal neural plate3.93e-0712
tube8.79e-07114
pre-chordal neural plate9.39e-0749
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