FFCP PHASE1:Mm9::chr19:12870006..12870057,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=688 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:12870006..12870057,- | |||
|description=CAGE_peak_at_chr19:12870006..12870057,- | |description=CAGE_peak_at_chr19:12870006..12870057,- | ||
|id=chr19:12870006..12870057,- | |id=chr19:12870006..12870057,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.83e-16!130;UBERON:0000925!6.83e-16!130;UBERON:0006595!6.83e-16!130;UBERON:0001007!1.47e-15!128;UBERON:0001555!1.47e-15!128;UBERON:0007026!1.47e-15!128;UBERON:0004921!3.58e-15!126;UBERON:0004185!3.58e-15!126;UBERON:0005409!1.72e-13!59;UBERON:0000160!6.42e-11!43;UBERON:0004923!1.22e-07!24 | |ontology_enrichment_uberon=UBERON:0004119!6.83e-16!130;UBERON:0000925!6.83e-16!130;UBERON:0006595!6.83e-16!130;UBERON:0001007!1.47e-15!128;UBERON:0001555!1.47e-15!128;UBERON:0007026!1.47e-15!128;UBERON:0004921!3.58e-15!126;UBERON:0004185!3.58e-15!126;UBERON:0005409!1.72e-13!59;UBERON:0000160!6.42e-11!43;UBERON:0004923!1.22e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.54e-15,118;UBERON:0000925,7.54e-15,118;UBERON:0006595,7.54e-15,118;UBERON:0001007,1.55e-14,116;UBERON:0001555,1.55e-14,116;UBERON:0007026,1.55e-14,116;UBERON:0004921,3.59e-14,114;UBERON:0005409,2.23e-13,47;UBERON:0000160,2.85e-11,31;UBERON:0004923,1.18e-07,24 | |||
|phase1_expression=1.76163731815273,23.3813523118372,24.5699589270349,43.5548464281835,52.0931559144201,12.7588246653036,11.6806320297763,0.903863264091034,1.267098499365,0.468129052643987,2.91070545983358,2.15384829287408,1.02720437958723,0.961624426608971,5.66286595086627,5.26435695213547,11.8925519281785,3.15462165358238,3.01651753932625,1.69755860719212,0.850432901510698,1.48936426801328,0.783599367416806,4.15980299262857,5.27641346454491,11.4846392823004,14.6459078694085,8.40337807474967,8.17100703662408,15.8778981748756,7.98229838359097,2.54012269383853,0,0,2.3108129580102,2.65975432573588,2.85837098767317,2.09265815368454,2.3440060335714,2.61761871986899,2.35292595212406,2.04913645487534,4.85510353031154,0.377690453926732,0.912392380975631,0.183546752161682,0.782391344348039,0.872100625521786,1.09843091367236,1.94429899074283,0.979904951377538,0,4.53013036355888,2.90144856804538,5.71359458542189,0.257259436035947,0.85960031981627,1.03134418455488,1.61853168687678,1.05798195854407,1.90149421051854,0.677689064138264,0,4.04954872776629,1.97773272513395,7.8152812644071,0,0.768436610643109,1.14058573539325,0.810035629990144,1.89292465216244,1.42825492201902,1.32521124570968,1.34739879136449,1.82106394934649,0.919218786610021,4.40463523997555,6.38436690425939,4.91540906419979,1.71452174049252,1.37231465403614,3.64639359389732,1.3959149950069,1.12552522006336,3.81995619442025,1.17851434189467,1.56608848879013,1.86399445825301,1.66597625333005,1.66257432234928,0.579728977403356,0.860423876981386,3.39985666853875,8.09554787456726,0.649776417447669,5.37632264516803,5.47733238513832,3.74946709671727,4.1565760736459,3.5333957451034,1.83096445709685,1.28326477414318,12.7402619853323,7.11066703153331,0.432982082022428,0.506719730950197,1.01104889002957,7.07940054258172,0,1.63286352971307,1.73485326766136,1.21786191324856,0.922461989024234,2.26083960828934,3.17489509266403,7.03732911446183,2.47194967734374,2.16899035379867,15.9229899350977,4.69123864847487,11.4837589599405,9.21262980956922,11.1835056730873,5.5628351432194,5.02672096352292,10.4737392635522,1.67741174308288,1.19980546198682,1.14363204365758,2.24685959107234,5.03250663100489,1.00523481690292,3.47648640384553,4.85859368927628,5.194701113989,6.97637431191358,3.05518091550949,10.2013715900276,3.53811861807145,11.5743020737561,2.34216797332867,0.689706313300419,1.62055916824814,3.0140963567143,2.17716797284249,2.562274405697,2.81105173679186,4.39795730256327,1.72454394346274,1.32374256117473,1.05570674498369,1.7535658594206,3.89266148915837,2.089512999133,3.70407845534298,1.79130840136644,1.40442637462647,0.51469581422943,1.42081749697796,1.44988040774851,2.81431271977315,2.70093092191522,1.89395788468168,2.16440654922144,2.31400669331067,2.79040733700489,2.95100741539581,3.97002164048376,3.62031669809657,2.95501435342371,3.89130285820108,5.55559952216263,5.26920276698522,5.36825675041487,2.73376933133365,2.36680608472354,13.2167513193519,17.982638533121,2.55945900642281,2.55460339046482,2.83508414908605,5.84882221407693,6.44896327150124,4.37518940058886,11.8632265386128,7.74085087202851,11.8127548136127,11.1415624343044,10.5280607044325,15.2799299471218,12.9682829924817,14.3381716743144,2.27601481143698,2.28497025219458,2.25415471346161,1.4255592949172,1.74557238450863,3.36651935473529,3.22506339333712,4.72352473534727,5.80895293013087,4.31890073726302,10.3758419480502,7.34118465150814,9.43483176543374,9.89393294493356,14.6059287399722,9.16473207059184,6.3656462945355,6.90470729881945,4.70192157647603,9.06052663520669,4.31304619582064,8.93138274404408,4.68056509671841,9.34541848404313,8.96987067609561,11.0962009913574,4.0645701836653,1.89491411770485,1.46668478797823,2.8856664581782,3.75504397261603,2.84760637651087,1.90434912708811,4.87834119644497,3.4679731703362,4.20782910332672,5.26200736569707,4.7520361267564,7.08008425650172,5.64131328467895,0,2.17562273527484,7.37646409528554,6.34654516500885,5.61927064957272,6.91548950893999,4.09837363441689,5.55436039849621,0.94652465824877,0.780877488593277,0.861693590931196,0.477937595905104,0.668396022247182,1.13230612315533,0.809621403349789,0.876767573733936,1.97643888973262,1.60660658210904,1.41940085208269,1.42452482933804,2.76907830901079,1.81467135269789,7.96470830039777,0.971122544619926,3.02323556964751,4.71512699389745,2.36241514304618,3.68922177532713,4.65170927702798,2.54473610634254,3.20847640546249,6.95280867458795,8.4334886859999,10.3135543248187,1.70219802876894,1.62054984628179,1.16422815404479,1.92903331528433,1.95074257006501,0.713475270408282,0.987294123612726,0.913394847343798,5.86679270159276,3.60114520468494,5.95426674748397,7.25499512942512,4.19807509409354,5.60910201831849,6.92359595218192,8.69946768648825,9.03590593552537,5.93360966433631,8.54354403989263,3.92135049130123,4.44466865687308,15.4462134743847,19.1371918809435,18.3022538565218,0.679913719975421,0.979660166265606,1.38199973804424,5.72802370809068,0.949007980743406,1.01659733563424,3.78018692876304,3.55450103224597,4.58561383866973,6.06889558731693,6.77758336947755,10.4702376793612,9.72112299688447,4.34937519160848,16.9107881605257,1.34564891439581,1.32366792365678,2.33341426012857,1.6790777052105,1.68956125490778,3.63807439801837,1.69265700297135,2.30690557736564,6.76435538312817,12.9613502816039,4.4241556887945,0.405450430580328,2.46506297195585,2.98817892848929,3.40150721768215,2.38417625737518,4.92801343031872,4.28299628806274,6.3608863467333,6.55378537232999,6.65452821903147,9.74578807397524,6.06134602334076,7.12949103307571,4.0811469050738,1.10992976687032,1.43542170575161,2.01461539636894,2.12508553435409,3.94133198447482,3.29672923681077,4.93047271881851,3.00943262421218,1.12950368523413,0,1.71868654031819,0.859265911718438,1.37016503954128,0.755393897389701,1.35004500046361,1.35096360967266,2.71885445390523,2.07104124700728,3.63255716544618,1.59609949360412,1.02440163452481,1.94485373654635,3.98265008993166,4.04455718590031,3.11145418922261,2.88449080134452,1.60459604795908,1.26348605881899,3.04175159868288,2.26351609663291,3.46473577638565,2.68905640100451,3.79074095107048,3.81034953026459,3.82418275618023,5.40145817298374,5.35711671044299,4.26876868389752,3.77156177623957,3.54951612318675,4.05341522910446,4.0696996657052,3.57615645578256,3.21535509988371,3.65855945745545,2.63069711437843,3.80251518768413,4.48913817326191,4.98267076121531,4.13718825977367,3.6830793885272,3.56354734727722,5.01557188550968,2.24829520144151,3.27504251823572,3.65280791882107,1.91288332068843,4.19123696327079,4.17362104116759 | |phase1_expression=1.76163731815273,23.3813523118372,24.5699589270349,43.5548464281835,52.0931559144201,12.7588246653036,11.6806320297763,0.903863264091034,1.267098499365,0.468129052643987,2.91070545983358,2.15384829287408,1.02720437958723,0.961624426608971,5.66286595086627,5.26435695213547,11.8925519281785,3.15462165358238,3.01651753932625,1.69755860719212,0.850432901510698,1.48936426801328,0.783599367416806,4.15980299262857,5.27641346454491,11.4846392823004,14.6459078694085,8.40337807474967,8.17100703662408,15.8778981748756,7.98229838359097,2.54012269383853,0,0,2.3108129580102,2.65975432573588,2.85837098767317,2.09265815368454,2.3440060335714,2.61761871986899,2.35292595212406,2.04913645487534,4.85510353031154,0.377690453926732,0.912392380975631,0.183546752161682,0.782391344348039,0.872100625521786,1.09843091367236,1.94429899074283,0.979904951377538,0,4.53013036355888,2.90144856804538,5.71359458542189,0.257259436035947,0.85960031981627,1.03134418455488,1.61853168687678,1.05798195854407,1.90149421051854,0.677689064138264,0,4.04954872776629,1.97773272513395,7.8152812644071,0,0.768436610643109,1.14058573539325,0.810035629990144,1.89292465216244,1.42825492201902,1.32521124570968,1.34739879136449,1.82106394934649,0.919218786610021,4.40463523997555,6.38436690425939,4.91540906419979,1.71452174049252,1.37231465403614,3.64639359389732,1.3959149950069,1.12552522006336,3.81995619442025,1.17851434189467,1.56608848879013,1.86399445825301,1.66597625333005,1.66257432234928,0.579728977403356,0.860423876981386,3.39985666853875,8.09554787456726,0.649776417447669,5.37632264516803,5.47733238513832,3.74946709671727,4.1565760736459,3.5333957451034,1.83096445709685,1.28326477414318,12.7402619853323,7.11066703153331,0.432982082022428,0.506719730950197,1.01104889002957,7.07940054258172,0,1.63286352971307,1.73485326766136,1.21786191324856,0.922461989024234,2.26083960828934,3.17489509266403,7.03732911446183,2.47194967734374,2.16899035379867,15.9229899350977,4.69123864847487,11.4837589599405,9.21262980956922,11.1835056730873,5.5628351432194,5.02672096352292,10.4737392635522,1.67741174308288,1.19980546198682,1.14363204365758,2.24685959107234,5.03250663100489,1.00523481690292,3.47648640384553,4.85859368927628,5.194701113989,6.97637431191358,3.05518091550949,10.2013715900276,3.53811861807145,11.5743020737561,2.34216797332867,0.689706313300419,1.62055916824814,3.0140963567143,2.17716797284249,2.562274405697,2.81105173679186,4.39795730256327,1.72454394346274,1.32374256117473,1.05570674498369,1.7535658594206,3.89266148915837,2.089512999133,3.70407845534298,1.79130840136644,1.40442637462647,0.51469581422943,1.42081749697796,1.44988040774851,2.81431271977315,2.70093092191522,1.89395788468168,2.16440654922144,2.31400669331067,2.79040733700489,2.95100741539581,3.97002164048376,3.62031669809657,2.95501435342371,3.89130285820108,5.55559952216263,5.26920276698522,5.36825675041487,2.73376933133365,2.36680608472354,13.2167513193519,17.982638533121,2.55945900642281,2.55460339046482,2.83508414908605,5.84882221407693,6.44896327150124,4.37518940058886,11.8632265386128,7.74085087202851,11.8127548136127,11.1415624343044,10.5280607044325,15.2799299471218,12.9682829924817,14.3381716743144,2.27601481143698,2.28497025219458,2.25415471346161,1.4255592949172,1.74557238450863,3.36651935473529,3.22506339333712,4.72352473534727,5.80895293013087,4.31890073726302,10.3758419480502,7.34118465150814,9.43483176543374,9.89393294493356,14.6059287399722,9.16473207059184,6.3656462945355,6.90470729881945,4.70192157647603,9.06052663520669,4.31304619582064,8.93138274404408,4.68056509671841,9.34541848404313,8.96987067609561,11.0962009913574,4.0645701836653,1.89491411770485,1.46668478797823,2.8856664581782,3.75504397261603,2.84760637651087,1.90434912708811,4.87834119644497,3.4679731703362,4.20782910332672,5.26200736569707,4.7520361267564,7.08008425650172,5.64131328467895,0,2.17562273527484,7.37646409528554,6.34654516500885,5.61927064957272,6.91548950893999,4.09837363441689,5.55436039849621,0.94652465824877,0.780877488593277,0.861693590931196,0.477937595905104,0.668396022247182,1.13230612315533,0.809621403349789,0.876767573733936,1.97643888973262,1.60660658210904,1.41940085208269,1.42452482933804,2.76907830901079,1.81467135269789,7.96470830039777,0.971122544619926,3.02323556964751,4.71512699389745,2.36241514304618,3.68922177532713,4.65170927702798,2.54473610634254,3.20847640546249,6.95280867458795,8.4334886859999,10.3135543248187,1.70219802876894,1.62054984628179,1.16422815404479,1.92903331528433,1.95074257006501,0.713475270408282,0.987294123612726,0.913394847343798,5.86679270159276,3.60114520468494,5.95426674748397,7.25499512942512,4.19807509409354,5.60910201831849,6.92359595218192,8.69946768648825,9.03590593552537,5.93360966433631,8.54354403989263,3.92135049130123,4.44466865687308,15.4462134743847,19.1371918809435,18.3022538565218,0.679913719975421,0.979660166265606,1.38199973804424,5.72802370809068,0.949007980743406,1.01659733563424,3.78018692876304,3.55450103224597,4.58561383866973,6.06889558731693,6.77758336947755,10.4702376793612,9.72112299688447,4.34937519160848,16.9107881605257,1.34564891439581,1.32366792365678,2.33341426012857,1.6790777052105,1.68956125490778,3.63807439801837,1.69265700297135,2.30690557736564,6.76435538312817,12.9613502816039,4.4241556887945,0.405450430580328,2.46506297195585,2.98817892848929,3.40150721768215,2.38417625737518,4.92801343031872,4.28299628806274,6.3608863467333,6.55378537232999,6.65452821903147,9.74578807397524,6.06134602334076,7.12949103307571,4.0811469050738,1.10992976687032,1.43542170575161,2.01461539636894,2.12508553435409,3.94133198447482,3.29672923681077,4.93047271881851,3.00943262421218,1.12950368523413,0,1.71868654031819,0.859265911718438,1.37016503954128,0.755393897389701,1.35004500046361,1.35096360967266,2.71885445390523,2.07104124700728,3.63255716544618,1.59609949360412,1.02440163452481,1.94485373654635,3.98265008993166,4.04455718590031,3.11145418922261,2.88449080134452,1.60459604795908,1.26348605881899,3.04175159868288,2.26351609663291,3.46473577638565,2.68905640100451,3.79074095107048,3.81034953026459,3.82418275618023,5.40145817298374,5.35711671044299,4.26876868389752,3.77156177623957,3.54951612318675,4.05341522910446,4.0696996657052,3.57615645578256,3.21535509988371,3.65855945745545,2.63069711437843,3.80251518768413,4.48913817326191,4.98267076121531,4.13718825977367,3.6830793885272,3.56354734727722,5.01557188550968,2.24829520144151,3.27504251823572,3.65280791882107,1.91288332068843,4.19123696327079,4.17362104116759 | ||
|short_description=p@chr19:12870006..12870057,- | |short_description=p@chr19:12870006..12870057,- | ||
}} | }} |
Latest revision as of 08:33, 6 August 2015
Short description: | p@chr19:12870006..12870057, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:12870006..12870057, - |
Coexpression cluster: | MCL_coexpression_mm9:688 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.54e-15 | 118 |
endoderm | 7.54e-15 | 118 |
presumptive endoderm | 7.54e-15 | 118 |
digestive system | 1.55e-14 | 116 |
digestive tract | 1.55e-14 | 116 |
primitive gut | 1.55e-14 | 116 |
subdivision of digestive tract | 3.59e-14 | 114 |
gastrointestinal system | 2.23e-13 | 47 |
intestine | 2.85e-11 | 31 |
organ component layer | 1.18e-07 | 24 |