FFCP PHASE1:Mm9::chr19:53215119..53215135,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=27360 | |EntrezGene=27360 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9QYB5,Q3UNK1,Q8BM29 | |UniProt=Q9QYB5,Q3UNK1,Q8BM29 | ||
|association_with_transcript=184bp_to_ENSMUST00000111741,NM_001164099,NM_001164101,uc008hwi.2,uc008hwj.2_5end | |association_with_transcript=184bp_to_ENSMUST00000111741,NM_001164099,NM_001164101,uc008hwi.2,uc008hwj.2_5end | ||
|cluster_id=chr19:53215119..53215135,+ | |||
|description=CAGE_peak_5_at_Add3_5end | |description=CAGE_peak_5_at_Add3_5end | ||
|id=chr19:53215119..53215135,+ | |id=chr19:53215119..53215135,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!2.53e-08!122;UBERON:0000025!5.35e-07!114;UBERON:0001017!5.84e-07!73;UBERON:0005743!5.84e-07!73 | |ontology_enrichment_uberon=UBERON:0004111!2.53e-08!122;UBERON:0000025!5.35e-07!114;UBERON:0001017!5.84e-07!73;UBERON:0005743!5.84e-07!73 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.31e-08,122;UBERON:0010314,2.88e-08,92;UBERON:0000025,5.48e-07,114;UBERON:0001017,6.88e-07,73 | |||
|phase1_expression=4.64431656603902,0.697950815278722,0,1.51232105653415,0.500895729946347,0.16787927191189,0.467225281191051,1.16210991097419,0.140788722151667,0,0,0,0,0.611942816932982,1.33243904726265,0.809901069559304,0,7.09789872056035,6.99283611389268,6.79023442876848,2.72138528483423,0.0992909512008853,0.522399578277871,0.799962113967033,1.83527424853736,0,0,0.215471232685889,4.75058548640935,2.52030129759931,0.221730510655305,0,0,0,3.17736781726402,1.82858109894342,1.63335485009895,15.4856703372656,9.37602413428561,15.7057123192139,9.41170380849623,11.6117732442936,15.0508209439658,1.76255545165808,1.21652317463417,0.734187008646726,0.782391344348039,0,0.659058548203415,1.36100929351998,1.95980990275508,0,8.38913030288682,0.725362142011344,1.34437519656986,1.54355661621568,1.43266719969378,0.515672092277442,0.606949382578793,0,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,0,0.675029691658453,0.420649922702764,11.4260393761521,7.28866185140325,0.857435594504678,0.575072826109418,0,3.30347642998166,6.89511625660014,4.91540906419979,0.263772575460388,1.28082701043374,0.52091337055676,7.2587579740359,6.75315132038016,5.04234217663473,10.3120004915784,14.3795397607094,2.79599168737951,0.151452386666368,1.28471652181535,5.79728977403356,2.58127163094416,0,0.539703191637817,0,0.448026887097336,1.54488862144927,0.511290967734173,0.259786004602869,0,1.69012103732017,0,0,0,0,0,0,0.34255163915718,5.43769555659061,0.445326417194474,1.21439728736295,1.82679286987285,1.15307748628029,1.65794904607885,2.70454026412121,0.879666139307728,0,1.15679485535929,0.884610551949874,0.647067399789637,1.10420759230197,0,0,10.5401086924157,8.58731497935166,2.29911349687732,0.718890747035522,0,0.254140454146129,10.1857634795279,5.49000723382352,1.88481528169297,6.43149984711423,5.11430914660661,6.85700547046548,6.97637431191358,2.85150218780886,1.24406970610093,1.0108910337347,2.73574412652416,0.260240885925407,0,2.34080768746954,1.50704817835715,0.612328492361951,0.768682321709099,0.562210347358373,1.55222022443409,0.862271971731369,2.08016688184601,2.28736461413134,1.7535658594206,2.22437799380478,1.0447564995665,1.85203922767149,1.59227413454795,0.702213187313235,0.257347907114715,0.568326998791185,10.7705401718461,5.8631514995274,7.02242039697958,7.33908680314152,6.49321964766433,5.707883176833,7.67362017676346,5.633741429392,2.56883753207773,3.78487654801005,1.97000956894914,2.10778904819225,2.19299981137998,2.63460138349261,1.20785776884335,7.99101804543684,1.13195073617213,0.660837565967596,0.793351699990633,1.06644125267617,0.696710015581316,2.06187938115349,3.42861991859682,4.89231696458715,3.42406127002606,1.89811624617805,3.62337700392824,1.00534083520108,0.795825888164603,2.14460495831032,0.898819408654221,2.37751854862164,1.39398891278057,1.70701110857774,1.25673363870702,1.1270773567308,1.22190796707189,0.581857461502877,0.911765658574141,0.822074982615345,1.32849133181642,1.8839847340965,0.987177311374404,0.592905254174298,1.16791574001266,1.37591296579242,0.224862112384854,0.811440485554012,1.4470629585145,0.50925170356284,2.87696137450811,0.486405680325106,0.549122826376163,0,3.72140947668503,0.312037673114561,0.505157755894224,0,0,2.03228509183265,2.84237117655727,3.25929952884052,1.69745085775188,2.11221223459652,1.00503754465089,1.90434912708811,2.14647012643579,1.57635144106191,1.55025282754142,3.50800491046472,4.09658286789345,3.10832967358612,2.31438493730419,0,0,0.983528546038072,0,8.83028244932856,8.79087649441524,0,1.76729649043061,2.2085575359138,1.17131623288992,3.66219776145758,2.38968797952552,1.78238939265915,1.41538265394416,2.83367491172426,4.9683495844923,5.13874111330481,6.10510501201433,1.13552068166615,3.91744328067962,1.79175655288934,1.48473110675282,1.32745138339963,1.45668381692989,1.81394134178851,0.565815239267694,0.885905678642318,0.614870295887855,1.55056975900933,0,1.78248689192361,1.26414703174326,0,0,1.36175842301515,0.900305470156551,0.776152102696527,0.857348140126369,1.06404140185364,2.14042581122485,2.46823530903181,0,0.938686832254841,0.21183207086382,2.20528398054962,1.31909002353184,2.42196640043858,1.20625849856312,1.3130957840345,0.492422699235184,0.874442509889552,8.52956389248344,1.53783792718067,0.412773735926445,1.66675074632741,1.50694765603753,0.820165366326151,1.60144721244566,0,0.139951452323658,0.414599921413271,0.954670618015114,0.949007980743406,1.62655573701479,1.72808545314882,2.09088296014469,2.62035076495413,1.48350781023303,1.73572257023205,1.30877970992015,1.8146096260851,1.86401793926078,0.56369293868419,0.299033092087958,0.66183396182839,1.16670713006429,1.54991788173277,1.18269287843545,1.99507305697782,0.911430693907651,3.04092098834561,1.44950472495604,0.864090018773596,0.316011120628178,0.608175645870493,0.410843828659309,0,0,0.596044064343795,0.240390899039938,0.147689527174577,0.100966449948148,0.15241361331,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,1.81384306892169,0,0,0,2.31827512838629,0.750729901804728,1.46521299413812,1.2862102744744,10.5330141847426,2.82375921308533,4.14292712856459,2.86447756719698,5.84300819968538,5.48066015816514,4.5323633843382,2.02506750069542,6.30449684513909,4.07828168085784,3.62432218226274,1.14166082342594,2.39414924040619,1.02440163452481,2.18796045361465,1.46729213839588,2.02227859295016,1.11123363900808,1.23621034343337,1.92551525755089,1.76888048234658,1.52087579934144,1.88626341386076,1.40462261204824,1.40855335290712,1.7230640686684,0.952587382566147,1.50649623728312,3.08654752741928,0.412085900803307,2.64958056241915,1.71434626192708,2.30718548007139,1.1921809497366,1.88950341622027,2.54095327121393,1.52306294205018,1.64635175585495,1.31534855718921,1.35804113845862,1.68342681497322,1.89816028998679,1.37906275325789,1.22769312950907,0.77468420592983,1.35034627686799,2.74791635731741,2.57324769289949,1.71896843238639,1.3390183244819,1.76473135295612,2.08681052058379 | |phase1_expression=4.64431656603902,0.697950815278722,0,1.51232105653415,0.500895729946347,0.16787927191189,0.467225281191051,1.16210991097419,0.140788722151667,0,0,0,0,0.611942816932982,1.33243904726265,0.809901069559304,0,7.09789872056035,6.99283611389268,6.79023442876848,2.72138528483423,0.0992909512008853,0.522399578277871,0.799962113967033,1.83527424853736,0,0,0.215471232685889,4.75058548640935,2.52030129759931,0.221730510655305,0,0,0,3.17736781726402,1.82858109894342,1.63335485009895,15.4856703372656,9.37602413428561,15.7057123192139,9.41170380849623,11.6117732442936,15.0508209439658,1.76255545165808,1.21652317463417,0.734187008646726,0.782391344348039,0,0.659058548203415,1.36100929351998,1.95980990275508,0,8.38913030288682,0.725362142011344,1.34437519656986,1.54355661621568,1.43266719969378,0.515672092277442,0.606949382578793,0,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,0,0.675029691658453,0.420649922702764,11.4260393761521,7.28866185140325,0.857435594504678,0.575072826109418,0,3.30347642998166,6.89511625660014,4.91540906419979,0.263772575460388,1.28082701043374,0.52091337055676,7.2587579740359,6.75315132038016,5.04234217663473,10.3120004915784,14.3795397607094,2.79599168737951,0.151452386666368,1.28471652181535,5.79728977403356,2.58127163094416,0,0.539703191637817,0,0.448026887097336,1.54488862144927,0.511290967734173,0.259786004602869,0,1.69012103732017,0,0,0,0,0,0,0.34255163915718,5.43769555659061,0.445326417194474,1.21439728736295,1.82679286987285,1.15307748628029,1.65794904607885,2.70454026412121,0.879666139307728,0,1.15679485535929,0.884610551949874,0.647067399789637,1.10420759230197,0,0,10.5401086924157,8.58731497935166,2.29911349687732,0.718890747035522,0,0.254140454146129,10.1857634795279,5.49000723382352,1.88481528169297,6.43149984711423,5.11430914660661,6.85700547046548,6.97637431191358,2.85150218780886,1.24406970610093,1.0108910337347,2.73574412652416,0.260240885925407,0,2.34080768746954,1.50704817835715,0.612328492361951,0.768682321709099,0.562210347358373,1.55222022443409,0.862271971731369,2.08016688184601,2.28736461413134,1.7535658594206,2.22437799380478,1.0447564995665,1.85203922767149,1.59227413454795,0.702213187313235,0.257347907114715,0.568326998791185,10.7705401718461,5.8631514995274,7.02242039697958,7.33908680314152,6.49321964766433,5.707883176833,7.67362017676346,5.633741429392,2.56883753207773,3.78487654801005,1.97000956894914,2.10778904819225,2.19299981137998,2.63460138349261,1.20785776884335,7.99101804543684,1.13195073617213,0.660837565967596,0.793351699990633,1.06644125267617,0.696710015581316,2.06187938115349,3.42861991859682,4.89231696458715,3.42406127002606,1.89811624617805,3.62337700392824,1.00534083520108,0.795825888164603,2.14460495831032,0.898819408654221,2.37751854862164,1.39398891278057,1.70701110857774,1.25673363870702,1.1270773567308,1.22190796707189,0.581857461502877,0.911765658574141,0.822074982615345,1.32849133181642,1.8839847340965,0.987177311374404,0.592905254174298,1.16791574001266,1.37591296579242,0.224862112384854,0.811440485554012,1.4470629585145,0.50925170356284,2.87696137450811,0.486405680325106,0.549122826376163,0,3.72140947668503,0.312037673114561,0.505157755894224,0,0,2.03228509183265,2.84237117655727,3.25929952884052,1.69745085775188,2.11221223459652,1.00503754465089,1.90434912708811,2.14647012643579,1.57635144106191,1.55025282754142,3.50800491046472,4.09658286789345,3.10832967358612,2.31438493730419,0,0,0.983528546038072,0,8.83028244932856,8.79087649441524,0,1.76729649043061,2.2085575359138,1.17131623288992,3.66219776145758,2.38968797952552,1.78238939265915,1.41538265394416,2.83367491172426,4.9683495844923,5.13874111330481,6.10510501201433,1.13552068166615,3.91744328067962,1.79175655288934,1.48473110675282,1.32745138339963,1.45668381692989,1.81394134178851,0.565815239267694,0.885905678642318,0.614870295887855,1.55056975900933,0,1.78248689192361,1.26414703174326,0,0,1.36175842301515,0.900305470156551,0.776152102696527,0.857348140126369,1.06404140185364,2.14042581122485,2.46823530903181,0,0.938686832254841,0.21183207086382,2.20528398054962,1.31909002353184,2.42196640043858,1.20625849856312,1.3130957840345,0.492422699235184,0.874442509889552,8.52956389248344,1.53783792718067,0.412773735926445,1.66675074632741,1.50694765603753,0.820165366326151,1.60144721244566,0,0.139951452323658,0.414599921413271,0.954670618015114,0.949007980743406,1.62655573701479,1.72808545314882,2.09088296014469,2.62035076495413,1.48350781023303,1.73572257023205,1.30877970992015,1.8146096260851,1.86401793926078,0.56369293868419,0.299033092087958,0.66183396182839,1.16670713006429,1.54991788173277,1.18269287843545,1.99507305697782,0.911430693907651,3.04092098834561,1.44950472495604,0.864090018773596,0.316011120628178,0.608175645870493,0.410843828659309,0,0,0.596044064343795,0.240390899039938,0.147689527174577,0.100966449948148,0.15241361331,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,1.81384306892169,0,0,0,2.31827512838629,0.750729901804728,1.46521299413812,1.2862102744744,10.5330141847426,2.82375921308533,4.14292712856459,2.86447756719698,5.84300819968538,5.48066015816514,4.5323633843382,2.02506750069542,6.30449684513909,4.07828168085784,3.62432218226274,1.14166082342594,2.39414924040619,1.02440163452481,2.18796045361465,1.46729213839588,2.02227859295016,1.11123363900808,1.23621034343337,1.92551525755089,1.76888048234658,1.52087579934144,1.88626341386076,1.40462261204824,1.40855335290712,1.7230640686684,0.952587382566147,1.50649623728312,3.08654752741928,0.412085900803307,2.64958056241915,1.71434626192708,2.30718548007139,1.1921809497366,1.88950341622027,2.54095327121393,1.52306294205018,1.64635175585495,1.31534855718921,1.35804113845862,1.68342681497322,1.89816028998679,1.37906275325789,1.22769312950907,0.77468420592983,1.35034627686799,2.74791635731741,2.57324769289949,1.71896843238639,1.3390183244819,1.76473135295612,2.08681052058379 | ||
|short_description=p5@Add3 | |short_description=p5@Add3 | ||
}} | }} |
Latest revision as of 22:52, 25 September 2015
Short description: | p5@Add3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Add3_5end |
Coexpression cluster: | NA |
Association with transcript: | 184bp_to_ENSMUST00000111741, NM_001164099, NM_001164101, uc008hwi.2, uc008hwj.2_5end |
EntrezGene: | Add3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 2.31e-08 | 122 |
structure with developmental contribution from neural crest | 2.88e-08 | 92 |
tube | 5.48e-07 | 114 |
central nervous system | 6.88e-07 | 73 |