Personal tools

FFCP PHASE1:Mm9::chr1:133904131..133904168,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13714
|EntrezGene=13714
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=P41158
|UniProt=P41158
|association_with_transcript=-13bp_to_NM_007923,uc007cob.1,uc007coc.1_5end
|association_with_transcript=-13bp_to_NM_007923,uc007cob.1,uc007coc.1_5end
|cluster_id=chr1:133904131..133904168,+
|description=CAGE_peak_4_at_Elk4_5end
|description=CAGE_peak_4_at_Elk4_5end
|id=chr1:133904131..133904168,+
|id=chr1:133904131..133904168,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000065!1.07e-08!41;UBERON:0001004!2.35e-08!42;UBERON:0005911!1.94e-07!69;UBERON:0004177!3.58e-07!29;UBERON:0006562!7.91e-07!24;UBERON:0001557!7.91e-07!24;UBERON:0001042!7.91e-07!24;UBERON:0008814!7.91e-07!24;UBERON:0009145!7.91e-07!24
|ontology_enrichment_uberon=UBERON:0000065!1.07e-08!41;UBERON:0001004!2.35e-08!42;UBERON:0005911!1.94e-07!69;UBERON:0004177!3.58e-07!29;UBERON:0006562!7.91e-07!24;UBERON:0001557!7.91e-07!24;UBERON:0001042!7.91e-07!24;UBERON:0008814!7.91e-07!24;UBERON:0009145!7.91e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0000065,9.31e-09,41;UBERON:0001004,2.05e-08,42;UBERON:0005911,1.71e-07,69;UBERON:0004177,3.09e-07,29;UBERON:0005057,3.09e-07,29;UBERON:0001048,3.30e-07,134;UBERON:0000077,3.40e-07,35;UBERON:0001041,4.87e-07,80;UBERON:0006562,6.78e-07,24;UBERON:0001557,6.78e-07,24;UBERON:0001042,6.78e-07,24;UBERON:0008814,6.78e-07,24;UBERON:0009145,6.78e-07,24
|phase1_expression=3.68342348341026,3.83872948403297,4.54999239389536,5.44435580352294,4.50806156951712,4.02910252588535,1.86890112476421,7.10178278928669,4.36445038670167,9.83071010552373,6.16384685611818,8.93448180747768,6.50562773738582,5.42006494997784,2.99798785634096,3.64455481301687,6.29605690315332,6.15151222448563,6.99283611389268,8.06340338416257,2.21112554392781,2.08510997521859,0.783599367416806,1.59992422793407,1.83527424853736,5.7423196411502,1.29228598847722,2.58565479223067,2.66032787238923,2.77233142735924,1.77384408524244,1.27006134691926,2.46025915033828,0,0.866554859253824,1.49611180822643,1.83752420636132,1.25559489221072,0,1.0470474879476,0,2.04913645487534,1.94204141212461,1.6366586336825,3.34543873024398,2.20256102594018,2.34717403304412,1.09012578190223,1.5378032791413,2.13872888981712,3.07970127575798,1.43752564364972,7.71799987865587,2.90144856804538,6.72187598284928,2.05807548828758,1.43266719969378,2.57836046138721,2.22548106945558,0.528990979272033,0,2.37191172448392,0.889294796111139,1.7997994345628,0.988866362566974,0.7104801149461,1.19840044207362,2.30530983192933,4.45865332926454,2.8351247049655,3.36519938162211,4.28476476605705,2.42955395046775,3.55223317723367,3.54628242767475,3.67687514644008,2.20231761998777,2.042997409363,2.4577045320999,1.45074916503213,2.01272815925301,1.04182674111352,1.11673199600552,3.93933827022176,1.22238598221448,0.883885756421003,2.70506193518296,3.16879057903011,6.89108359331975,3.70300644523249,3.18850937571846,0,2.03991400112325,4.31762553310254,1.29955283489534,3.58421509677868,3.65155492342555,2.55645483867087,2.59786004602869,3.18005617059306,5.35204995151386,1.28326477414318,0,0,1.08245520505607,2.02687892380079,2.02209778005913,2.74041311325744,5.69663344023778,3.71105347662062,2.60227990149204,0.913396434936424,3.22861696158482,1.65794904607885,3.52766121407114,2.51333182659351,3.21353458054686,3.32578520915797,6.19227386364912,4.52947179852746,4.19598885074748,4.84875253135222,1.86391761218122,3.51336956413857,3.14170060220183,2.81002760729451,3.23500836165985,2.99951365496704,1.90605340609597,2.99581278809645,3.66000482254901,3.5183218591602,3.65031072403781,2.30143911597297,1.24672826735736,2.59586020908412,7.33243419722277,4.35424397135326,3.79084137650512,3.57751155007006,2.34216797332867,2.98872735763515,2.70093194708024,2.26057226753573,4.76255494059295,3.20284300712124,4.12287588062807,2.32833033665114,1.5089759505299,2.83659120251729,2.11141348996739,4.60311038097907,2.50242524303038,4.87553033131033,3.90986059175093,3.18454826909589,1.40442637462647,0.51469581422943,1.70498099637356,2.07125772535502,1.64168241986767,2.34080679899319,3.55117103377815,1.77087808572663,3.08534225774756,1.62773761325285,2.14618721119695,3.26942958628075,5.26591519723137,4.43252153013557,4.13450928683864,3.36259971078264,3.07370161407471,3.75777972529041,2.73376933133365,3.2929475961371,2.31293148088659,2.11560453330835,1.91959425481711,2.55460339046482,2.70621668776396,2.01683524623343,2.66853652613844,1.33157938278791,1.42358718463353,2.63518327558417,2.5133520880027,1.59165177632921,1.75467678407208,2.69645822596266,2.16138049874694,2.19055400579804,4.93136542478012,4.22719496655997,2.25415471346161,3.05476991767971,1.74557238450863,5.04977903210294,3.54124607895841,3.39503340353085,2.98297582898612,2.71473760627961,4.74324203339438,3.67059232575407,3.73462090715086,3.37293168577281,3.85434230638156,3.13530307678142,0.50925170356284,3.16465751195892,5.99900339067631,1.09824565275233,4.31304619582064,3.72140947668503,3.43241440426017,4.2938409251009,2.51156378930677,4.3419916922703,5.17308932466493,3.22135400009824,4.56301934037672,2.03694102930226,3.52035372432753,5.86271901046355,4.76087281772027,7.02481132288076,4.57141917907954,6.42247599981447,5.89982644032702,5.73521601505083,4.66249451037918,6.36455857758651,4.52373851817817,1.63171705145613,1.96705709207614,3.31124095565679,3.53211297973142,2.22702204525186,3.77050374366353,5.04941854408746,3.47059041357882,4.29482618726302,3.66219776145758,2.62865677747807,2.22798674082394,4.24614796183249,2.42886421004937,3.50707029493574,5.13874111330481,2.57057053137446,4.25820255624806,2.67098405500883,7.32991317091092,5.1140738121486,0,1.45668381692989,1.81394134178851,2.26326095707078,0.590603785761546,2.15204603560749,3.35956781118687,2.54473610634254,3.92147116223193,2.52829406348653,0,4.12542172992747,2.38307724027652,1.8006109403131,1.94038025674132,1.50035924522115,3.19212420556092,2.67553226403106,3.1264313914403,2.43571959291679,3.75474732901937,4.44847348814022,1.98475558249466,7.25499512942512,7.75029248140347,8.7453741145826,8.35606408021955,7.38634048852776,3.20628920292836,2.78137953015765,4.44264290074417,2.68302928352189,3.70389054739423,3.39063222608444,4.78429797023588,5.0331198105435,3.73952545986482,2.09927178485487,3.59319931891502,0.954670618015114,2.53068794864908,3.65975040828328,2.26811215725783,1.88179466413022,1.52853794622324,4.04593039154462,4.95920734352016,3.92633912976044,2.46268449254406,2.4853572523477,0.56369293868419,1.94371509857172,3.14371131868485,5.05573089694524,3.61647505737647,3.21016638432478,4.3422178298929,5.4685841634459,4.08951443260272,1.20792060413003,1.72818003754719,3.79213344753814,4.66267995167378,2.87590680061516,3.11809975146708,6.26593434836185,6.35780335300048,5.64918612743854,6.79371825003055,7.77441664600737,7.23964663222498,8.97353047717881,7.01696741326217,6.63861707318273,7.24636793525727,5.21479882314986,2.21985953374065,1.79427713218951,2.01461539636894,3.09103350451505,3.56596703357246,2.56412273974171,4.93047271881851,0.501572104035363,2.82375921308533,1.84130094602871,3.43737308063638,2.06223818812425,0.685082519770642,1.5107877947794,2.70009000092722,2.2516060161211,3.62513927187364,1.55328093525546,2.38710899443606,4.78829848081237,3.24393850932855,3.40349403895612,4.40187641518763,3.30918315210025,3.55594764482584,1.85431551515005,2.24643446714271,2.77966932940177,3.8021894983536,4.14977951049368,3.09016974650612,2.94515701062399,4.13535376480416,2.38146845641537,3.70829843023538,2.70072908649187,4.53294490883637,2.50238164228475,1.37147700954166,1.59728225543404,2.62279808942053,2.61623549938191,2.91739079287525,2.876896668317,4.57319932181931,2.10455769150274,3.25929873230068,1.68342681497322,4.38949567059444,3.54616136552028,4.09231043169689,3.25367366490529,5.01557188550968,2.99772693525535,4.21076895201735,4.72716318906256,3.63447830930802,3.97064554415128,0.927471342481686
|phase1_expression=3.68342348341026,3.83872948403297,4.54999239389536,5.44435580352294,4.50806156951712,4.02910252588535,1.86890112476421,7.10178278928669,4.36445038670167,9.83071010552373,6.16384685611818,8.93448180747768,6.50562773738582,5.42006494997784,2.99798785634096,3.64455481301687,6.29605690315332,6.15151222448563,6.99283611389268,8.06340338416257,2.21112554392781,2.08510997521859,0.783599367416806,1.59992422793407,1.83527424853736,5.7423196411502,1.29228598847722,2.58565479223067,2.66032787238923,2.77233142735924,1.77384408524244,1.27006134691926,2.46025915033828,0,0.866554859253824,1.49611180822643,1.83752420636132,1.25559489221072,0,1.0470474879476,0,2.04913645487534,1.94204141212461,1.6366586336825,3.34543873024398,2.20256102594018,2.34717403304412,1.09012578190223,1.5378032791413,2.13872888981712,3.07970127575798,1.43752564364972,7.71799987865587,2.90144856804538,6.72187598284928,2.05807548828758,1.43266719969378,2.57836046138721,2.22548106945558,0.528990979272033,0,2.37191172448392,0.889294796111139,1.7997994345628,0.988866362566974,0.7104801149461,1.19840044207362,2.30530983192933,4.45865332926454,2.8351247049655,3.36519938162211,4.28476476605705,2.42955395046775,3.55223317723367,3.54628242767475,3.67687514644008,2.20231761998777,2.042997409363,2.4577045320999,1.45074916503213,2.01272815925301,1.04182674111352,1.11673199600552,3.93933827022176,1.22238598221448,0.883885756421003,2.70506193518296,3.16879057903011,6.89108359331975,3.70300644523249,3.18850937571846,0,2.03991400112325,4.31762553310254,1.29955283489534,3.58421509677868,3.65155492342555,2.55645483867087,2.59786004602869,3.18005617059306,5.35204995151386,1.28326477414318,0,0,1.08245520505607,2.02687892380079,2.02209778005913,2.74041311325744,5.69663344023778,3.71105347662062,2.60227990149204,0.913396434936424,3.22861696158482,1.65794904607885,3.52766121407114,2.51333182659351,3.21353458054686,3.32578520915797,6.19227386364912,4.52947179852746,4.19598885074748,4.84875253135222,1.86391761218122,3.51336956413857,3.14170060220183,2.81002760729451,3.23500836165985,2.99951365496704,1.90605340609597,2.99581278809645,3.66000482254901,3.5183218591602,3.65031072403781,2.30143911597297,1.24672826735736,2.59586020908412,7.33243419722277,4.35424397135326,3.79084137650512,3.57751155007006,2.34216797332867,2.98872735763515,2.70093194708024,2.26057226753573,4.76255494059295,3.20284300712124,4.12287588062807,2.32833033665114,1.5089759505299,2.83659120251729,2.11141348996739,4.60311038097907,2.50242524303038,4.87553033131033,3.90986059175093,3.18454826909589,1.40442637462647,0.51469581422943,1.70498099637356,2.07125772535502,1.64168241986767,2.34080679899319,3.55117103377815,1.77087808572663,3.08534225774756,1.62773761325285,2.14618721119695,3.26942958628075,5.26591519723137,4.43252153013557,4.13450928683864,3.36259971078264,3.07370161407471,3.75777972529041,2.73376933133365,3.2929475961371,2.31293148088659,2.11560453330835,1.91959425481711,2.55460339046482,2.70621668776396,2.01683524623343,2.66853652613844,1.33157938278791,1.42358718463353,2.63518327558417,2.5133520880027,1.59165177632921,1.75467678407208,2.69645822596266,2.16138049874694,2.19055400579804,4.93136542478012,4.22719496655997,2.25415471346161,3.05476991767971,1.74557238450863,5.04977903210294,3.54124607895841,3.39503340353085,2.98297582898612,2.71473760627961,4.74324203339438,3.67059232575407,3.73462090715086,3.37293168577281,3.85434230638156,3.13530307678142,0.50925170356284,3.16465751195892,5.99900339067631,1.09824565275233,4.31304619582064,3.72140947668503,3.43241440426017,4.2938409251009,2.51156378930677,4.3419916922703,5.17308932466493,3.22135400009824,4.56301934037672,2.03694102930226,3.52035372432753,5.86271901046355,4.76087281772027,7.02481132288076,4.57141917907954,6.42247599981447,5.89982644032702,5.73521601505083,4.66249451037918,6.36455857758651,4.52373851817817,1.63171705145613,1.96705709207614,3.31124095565679,3.53211297973142,2.22702204525186,3.77050374366353,5.04941854408746,3.47059041357882,4.29482618726302,3.66219776145758,2.62865677747807,2.22798674082394,4.24614796183249,2.42886421004937,3.50707029493574,5.13874111330481,2.57057053137446,4.25820255624806,2.67098405500883,7.32991317091092,5.1140738121486,0,1.45668381692989,1.81394134178851,2.26326095707078,0.590603785761546,2.15204603560749,3.35956781118687,2.54473610634254,3.92147116223193,2.52829406348653,0,4.12542172992747,2.38307724027652,1.8006109403131,1.94038025674132,1.50035924522115,3.19212420556092,2.67553226403106,3.1264313914403,2.43571959291679,3.75474732901937,4.44847348814022,1.98475558249466,7.25499512942512,7.75029248140347,8.7453741145826,8.35606408021955,7.38634048852776,3.20628920292836,2.78137953015765,4.44264290074417,2.68302928352189,3.70389054739423,3.39063222608444,4.78429797023588,5.0331198105435,3.73952545986482,2.09927178485487,3.59319931891502,0.954670618015114,2.53068794864908,3.65975040828328,2.26811215725783,1.88179466413022,1.52853794622324,4.04593039154462,4.95920734352016,3.92633912976044,2.46268449254406,2.4853572523477,0.56369293868419,1.94371509857172,3.14371131868485,5.05573089694524,3.61647505737647,3.21016638432478,4.3422178298929,5.4685841634459,4.08951443260272,1.20792060413003,1.72818003754719,3.79213344753814,4.66267995167378,2.87590680061516,3.11809975146708,6.26593434836185,6.35780335300048,5.64918612743854,6.79371825003055,7.77441664600737,7.23964663222498,8.97353047717881,7.01696741326217,6.63861707318273,7.24636793525727,5.21479882314986,2.21985953374065,1.79427713218951,2.01461539636894,3.09103350451505,3.56596703357246,2.56412273974171,4.93047271881851,0.501572104035363,2.82375921308533,1.84130094602871,3.43737308063638,2.06223818812425,0.685082519770642,1.5107877947794,2.70009000092722,2.2516060161211,3.62513927187364,1.55328093525546,2.38710899443606,4.78829848081237,3.24393850932855,3.40349403895612,4.40187641518763,3.30918315210025,3.55594764482584,1.85431551515005,2.24643446714271,2.77966932940177,3.8021894983536,4.14977951049368,3.09016974650612,2.94515701062399,4.13535376480416,2.38146845641537,3.70829843023538,2.70072908649187,4.53294490883637,2.50238164228475,1.37147700954166,1.59728225543404,2.62279808942053,2.61623549938191,2.91739079287525,2.876896668317,4.57319932181931,2.10455769150274,3.25929873230068,1.68342681497322,4.38949567059444,3.54616136552028,4.09231043169689,3.25367366490529,5.01557188550968,2.99772693525535,4.21076895201735,4.72716318906256,3.63447830930802,3.97064554415128,0.927471342481686
|short_description=p4@Elk4
|short_description=p4@Elk4
}}
}}

Latest revision as of 08:49, 26 September 2015

Short description:p4@Elk4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Elk4_5end
Coexpression cluster:NA
Association with transcript: -13bp_to_NM_007923, uc007cob.1, uc007coc.1_5end
EntrezGene:Elk4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Elk4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.44
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.83
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.16
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.93
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.42
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.99
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.06
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I22.59
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.35
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.72
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.72
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D96.89
Mouse Schwann, donor2.CNhs12573.11746-123F93.70
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.74
accessory axillary lymph node, adult.CNhs10475.1063-29H95.70
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C13.53
adrenal gland, neonate N25.CNhs11223.1377-27I32.51
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F54.53
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.91
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D53.65
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.33
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.35
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C64.76
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G84.12
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A84.60
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B53.91
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C63.09
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E33.27
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G14.43
heart, neonate N16.CNhs11209.782-15G14.13
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D23.76
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G13.29
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I94.93
kidney, embryo E15.CNhs10997.434-16F84.23
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G75.05
kidney, neonate N10.CNhs11206.758-6D53.54
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F32.98
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F46.00
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B15.17
lung, embryo E12.CNhs10522.354-16G23.22
lung, embryo E14.CNhs10604.404-26F84.56
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A65.86
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C67.02
lung, neonate N06.CNhs11212.683-20E54.57
lung, neonate N07.CNhs11111.715-19A36.42
lung, neonate N10.CNhs11219.750-23E65.90
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C74.66
lung, neonate N30.CNhs11133.1394-42H26.36
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.05
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I74.26
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I47.33
oviduct, adult pregnant day01.CNhs10500.988-6G65.11
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G34.45
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C37.25
skin, neonate N00.CNhs11124.650-25G47.75
skin, neonate N03.CNhs11215.662-22H38.75
skin, neonate N06.CNhs11097.693-20I58.36
skin, neonate N10.CNhs11108.762-6C47.39
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G24.44
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F23.70
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H14.78
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.59
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B84.05
stomach, neonate N07.CNhs11210.718-18A94.96
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C53.14
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I53.62
testis, embryo E18.CNhs11027.503-18G53.21
testis, neonate N00.CNhs11189.1300-22B74.34
testis, neonate N07.CNhs11222.726-26I45.47
testis, neonate N10.CNhs11204.763-44D94.09
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I44.66
thymus, embryo E15.CNhs11005.430-45I22.88
thymus, embryo E16.CNhs11002.456-26C53.12
thymus, embryo E17.CNhs10581.478-18C16.27
thymus, embryo E18.CNhs10595.1273-19G46.36
thymus, neonate N02.CNhs11181.1541-43F85.65
thymus, neonate N03.CNhs11137.2104-43C76.79
thymus, neonate N06.CNhs11197.681-26C47.77
thymus, neonate N07.CNhs11211.713-19D37.24
thymus, neonate N10.CNhs11194.748-24E48.97
thymus, neonate N20.CNhs11186.820-7A27.02
thymus, neonate N25.CNhs11125.1362-25G76.64
thymus, neonate N30.CNhs11132.1393-42G27.25
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F95.02
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
respiratory tract9.31e-0941
respiratory system2.05e-0842
endo-epithelium1.71e-0769
hemopoietic organ3.09e-0729
immune organ3.09e-0729
primordium3.30e-07134
mixed endoderm/mesoderm-derived structure3.40e-0735
foregut4.87e-0780
pharynx6.78e-0724
upper respiratory tract6.78e-0724
chordate pharynx6.78e-0724
pharyngeal arch system6.78e-0724
pharyngeal region of foregut6.78e-0724
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:133904131..133904168,%2B&oldid=4244230"