FFCP PHASE1:Mm9::chr1:20608073..20608170,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=241035 | |EntrezGene=241035 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=479 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q8U0,E9PZ36,Q6T3A5,Q8CIS7,Q3UNU5 | |UniProt=E9Q8U0,E9PZ36,Q6T3A5,Q8CIS7,Q3UNU5 | ||
|association_with_transcript=0bp_to_ENSMUST00000060305,ENSMUST00000088448,ENSMUST00000128051,ENSMUST00000147480,NM_153179,uc007akv.1,uc007akw.1,uc007akx.1_5end | |association_with_transcript=0bp_to_ENSMUST00000060305,ENSMUST00000088448,ENSMUST00000128051,ENSMUST00000147480,NM_153179,uc007akv.1,uc007akw.1,uc007akx.1_5end | ||
|cluster_id=chr1:20608073..20608170,- | |||
|description=CAGE_peak_1_at_Pkhd1_5end | |description=CAGE_peak_1_at_Pkhd1_5end | ||
|id=chr1:20608073..20608170,- | |id=chr1:20608073..20608170,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!1.66e-18!85;UBERON:0001007!1.02e-14!128;UBERON:0001555!1.02e-14!128;UBERON:0007026!1.02e-14!128;UBERON:0004119!1.13e-14!130;UBERON:0000925!1.13e-14!130;UBERON:0006595!1.13e-14!130;UBERON:0000466!1.67e-14!79;UBERON:0004921!1.85e-14!126;UBERON:0004185!1.85e-14!126;UBERON:0009569!1.18e-13!66;UBERON:0002100!9.13e-13!98;UBERON:0005409!1.10e-11!59;UBERON:0005172!2.51e-11!49;UBERON:0005173!2.51e-11!49;UBERON:0002417!2.51e-11!49;UBERON:0000916!2.51e-11!49;UBERON:0000160!6.26e-10!43;UBERON:0006554!7.33e-10!16;UBERON:0000077!7.66e-10!97;UBERON:0001008!8.32e-10!17;UBERON:0003104!9.88e-10!131;UBERON:0009142!9.88e-10!131;UBERON:0009854!2.55e-09!23;UBERON:0009856!2.55e-09!23;UBERON:0002113!2.64e-09!14;UBERON:0003918!2.64e-09!14;UBERON:0005095!2.64e-09!14;UBERON:0007687!2.64e-09!14;UBERON:0001041!3.51e-09!92;UBERON:0001045!4.76e-09!13;UBERON:0002108!4.89e-09!16;UBERON:0002107!6.42e-09!22;UBERON:0007499!6.42e-09!22;UBERON:0006925!6.42e-09!22;UBERON:0009497!6.42e-09!22;UBERON:0000015!6.42e-09!22;UBERON:0002423!6.42e-09!22;UBERON:0006235!6.42e-09!22;UBERON:0008835!6.42e-09!22;UBERON:0003894!6.42e-09!22;UBERON:0004161!6.42e-09!22;UBERON:0008836!6.42e-09!22;UBERON:0001264!1.12e-08!12;UBERON:0003922!1.12e-08!12;UBERON:0002114!1.12e-08!12;UBERON:0003923!1.12e-08!12;UBERON:0003924!1.12e-08!12;UBERON:0003921!1.12e-08!12;UBERON:0002365!1.75e-08!25;UBERON:0002330!1.75e-08!25;UBERON:0000464!4.51e-07!57 | |ontology_enrichment_uberon=UBERON:0005177!1.66e-18!85;UBERON:0001007!1.02e-14!128;UBERON:0001555!1.02e-14!128;UBERON:0007026!1.02e-14!128;UBERON:0004119!1.13e-14!130;UBERON:0000925!1.13e-14!130;UBERON:0006595!1.13e-14!130;UBERON:0000466!1.67e-14!79;UBERON:0004921!1.85e-14!126;UBERON:0004185!1.85e-14!126;UBERON:0009569!1.18e-13!66;UBERON:0002100!9.13e-13!98;UBERON:0005409!1.10e-11!59;UBERON:0005172!2.51e-11!49;UBERON:0005173!2.51e-11!49;UBERON:0002417!2.51e-11!49;UBERON:0000916!2.51e-11!49;UBERON:0000160!6.26e-10!43;UBERON:0006554!7.33e-10!16;UBERON:0000077!7.66e-10!97;UBERON:0001008!8.32e-10!17;UBERON:0003104!9.88e-10!131;UBERON:0009142!9.88e-10!131;UBERON:0009854!2.55e-09!23;UBERON:0009856!2.55e-09!23;UBERON:0002113!2.64e-09!14;UBERON:0003918!2.64e-09!14;UBERON:0005095!2.64e-09!14;UBERON:0007687!2.64e-09!14;UBERON:0001041!3.51e-09!92;UBERON:0001045!4.76e-09!13;UBERON:0002108!4.89e-09!16;UBERON:0002107!6.42e-09!22;UBERON:0007499!6.42e-09!22;UBERON:0006925!6.42e-09!22;UBERON:0009497!6.42e-09!22;UBERON:0000015!6.42e-09!22;UBERON:0002423!6.42e-09!22;UBERON:0006235!6.42e-09!22;UBERON:0008835!6.42e-09!22;UBERON:0003894!6.42e-09!22;UBERON:0004161!6.42e-09!22;UBERON:0008836!6.42e-09!22;UBERON:0001264!1.12e-08!12;UBERON:0003922!1.12e-08!12;UBERON:0002114!1.12e-08!12;UBERON:0003923!1.12e-08!12;UBERON:0003924!1.12e-08!12;UBERON:0003921!1.12e-08!12;UBERON:0002365!1.75e-08!25;UBERON:0002330!1.75e-08!25;UBERON:0000464!4.51e-07!57 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.06e-22,79;UBERON:0002100,1.29e-17,90;UBERON:0009569,8.08e-14,66;UBERON:0005172,9.20e-12,49;UBERON:0005173,9.20e-12,49;UBERON:0002417,9.20e-12,49;UBERON:0000916,9.20e-12,49;UBERON:0009854,5.40e-10,23;UBERON:0009856,5.40e-10,23;UBERON:0002113,5.62e-10,14;UBERON:0003918,5.62e-10,14;UBERON:0011143,5.62e-10,14;UBERON:0005095,5.62e-10,14;UBERON:0007687,5.62e-10,14;UBERON:0006554,9.55e-10,18;UBERON:0001008,9.65e-10,19;UBERON:0002107,1.48e-09,22;UBERON:0007499,1.48e-09,22;UBERON:0006925,1.48e-09,22;UBERON:0009497,1.48e-09,22;UBERON:0000015,1.48e-09,22;UBERON:0002423,1.48e-09,22;UBERON:0006235,1.48e-09,22;UBERON:0008835,1.48e-09,22;UBERON:0003894,1.48e-09,22;UBERON:0004161,1.48e-09,22;UBERON:0008836,1.48e-09,22;UBERON:0001264,2.70e-09,12;UBERON:0002365,4.39e-09,25;UBERON:0002330,4.39e-09,25;UBERON:0001007,1.53e-08,116;UBERON:0001555,1.53e-08,116;UBERON:0007026,1.53e-08,116;UBERON:0004119,1.60e-08,118;UBERON:0000925,1.60e-08,118;UBERON:0006595,1.60e-08,118;UBERON:0004921,2.51e-08,114;UBERON:0003104,1.03e-07,61;UBERON:0009142,1.03e-07,61 | |||
|phase1_expression=0,1.39590163055744,0.909998478779072,2.41971369045464,1.00179145989269,1.6787927191189,3.27057696833736,0.387369970324729,0,0.468129052643987,0.513653904676515,0.239316476986009,0.684802919724823,0.262261207256992,0.333109761815663,0,0,0.315462165358238,0.411343300817216,0,14.4573593256819,0.397163804803541,0.522399578277871,3.19984845586813,1.60586496747019,2.8711598205751,0.86152399231815,2.15471232685889,15.771943814879,7.30887376303799,1.77384408524244,1.27006134691926,2.46025915033828,15.8481681015439,0.866554859253824,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0.377690453926732,0.709638518536602,1.10128051297009,0.782391344348039,0.436050312760893,0.439372365468944,0.388859798148567,0.699932108126813,1.43752564364972,0.335565212115473,0,1.00828139742739,0,0.286533439938757,1.54701627683233,1.01158230429799,0,0.633831403506179,0.677689064138264,3.55717918444456,0.899899717281399,0,2.1314403448383,1.19840044207362,1.15265491596466,0.414758449233911,0.270011876663381,0.420649922702764,0.856952953211411,1.10434270475807,0.122490799214954,0.191690942036473,1.83843757322004,0,0.383062014255563,0.614426133024974,0.395658863190582,0,3.12548022334056,0.837548997004143,1.68828783009504,0.15279824777681,0,0.142371680799103,0.559198337475902,0.227178579999552,0.226714680320357,202.035548625069,6.0229671388697,2.719885334831,3.2382191498269,17.5439632710871,10.3046184032387,6.74133216632409,0.340860645156116,0.259786004602869,0,0,1.28326477414318,0,14.2213340630666,3.68034769719064,3.54703811665138,4.54972000513305,13.7020655662872,1.55362730188303,0.593768556259299,1.90833859442749,2.13125834818499,2.07553947530453,0.301445281105245,1.17588707135705,0.376999773989026,1.97755974187499,1.01219549843938,0,0.485300549842228,0.883366073841574,0.484875253135222,7.45567044872489,1.17112318804619,0.83778682725382,6.64188343542338,0,0,0,1.64769703345305,2.74500361691176,0.251308704225729,0.869121600961382,0.255715457330331,1.87009240103604,0.486723789203273,12.220723662038,11.9430691785689,52.819056512638,1.26265113531884,0.130120442962704,1.37941262660084,1.0803727788321,0.753524089178575,0.340182495756639,0,0.374806898238915,1.29351685369508,0.215567992932842,1.32374256117473,0.703804496655795,1.31517439456545,0.278047249225598,0.348252166522167,0,8.35943920637671,0,0,0.284163499395593,1.24275463521301,0,0.36012412292203,1.18372367792605,0.590292695242212,0.617068451549513,0.232533944750408,1.07309360559848,0.350296027101508,0.658239399653922,0.820837320395476,0.56748166682099,1.16959989940266,1.09775057645525,0.939444931322602,1.26173969138476,0.308713837137853,5.94753809370836,2.11560453330835,2.13288250535234,2.78684006232526,5.28356591420583,7.05892336181699,2.44615848229357,4.56541502670142,3.79623249235609,2.30578536613615,5.7807098024062,5.76973768919337,7.01870713628832,1.79763881730844,3.24207074812041,4.38110801159608,7.01771233526402,20.1077382193123,41.7018621990398,55.3931611739255,66.1377981241604,57.6516439498419,181.046205786749,188.645769117932,222.153199895545,147.459610886552,20.4552312690133,2.8363667971736,2.35870794135844,2.47348323623339,3.65148218499305,4.82354319504834,6.3656462945355,5.75392274901621,5.5125977103512,6.86403532970204,27.3159592401974,16.7463426450827,27.4593152340813,22.9846778931872,20.9894973820637,16.8855232477179,3.69506380333209,2.84237117655727,4.4000543639347,3.39490171550376,7.04070744865506,4.18765643604539,3.33261097240419,1.95133647857799,3.62560831444239,3.98636441367795,1.91345722388985,0.983179888294428,0.518054945597687,1.44649058581512,1.50791283939272,1.08781136763742,2.45882136509518,1.65562047782839,0.160550589987792,0.937693492737625,0.655739781506702,1.00988370881749,0.315508219416257,0,0.430846795465598,0.716906393857656,1.11399337041197,0.566153061577665,0.404810701674894,0.584511715822624,1.58115111178609,0.642642632843614,2.83880170416537,2.49291845134157,3.4206261464251,5.27904393512113,94.2490482213736,17.7229864393136,17.2324427469908,36.4007803928883,25.986566573508,47.9598830792527,38.2473873888967,73.4338133544561,69.1604914066359,56.8866164284469,55.8718625447493,53.6304824890572,1.02131881726136,0.540183282093931,0.517434735131018,0.214337035031592,1.59606210278046,0,0.493647061806363,0.913394847343798,1.40803024838226,1.27099242518292,2.8668691747145,0.32977250588296,0.645857706783622,0.180938774784468,0.119372344003136,0.492422699235184,2.04036585640896,1.29797711407357,0.512612642393558,2.27025554759545,1.29636169158798,0.376736914009382,0.27338845544205,0.686334519619568,0,0.139951452323658,0,14.3200592702267,3.00519193902079,11.9958485604841,7.77638453916969,9.61806161666556,12.8833912610245,9.17077555416781,9.4224939526883,8.37619014348895,6.99920855775682,1.24267862617385,1.69107881605257,0.897099276263873,0.66183396182839,0.194451188344048,0.516639293910924,0.337912250981556,0.938857909166032,4.03633593016245,0.524296722128554,0.483168241652012,2.59227005632079,0.948033361884535,0.202725215290164,0.513554785824136,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| ||
|short_description=p1@Pkhd1 | |short_description=p1@Pkhd1 | ||
}} | }} |
Latest revision as of 00:56, 27 September 2015
Short description: | p1@Pkhd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pkhd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:479 |
Association with transcript: | 0bp_to_ENSMUST00000060305, ENSMUST00000088448, ENSMUST00000128051, ENSMUST00000147480, NM_153179, uc007akv.1, uc007akw.1, uc007akx.1_5end |
EntrezGene: | Pkhd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data