FFCP PHASE1:Mm9::chr9:15162136..15162203,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319675 | |EntrezGene=319675 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=973 | |||
|TSSclassifier=NA | |||
|UniProt=E9QPW4,Q8BQ48 | |UniProt=E9QPW4,Q8BQ48 | ||
|association_with_transcript=28bp_to_ENSMUST00000098979,ENSMUST00000115596,ENSMUST00000161132,NM_176976,uc009ofu.2_5end | |association_with_transcript=28bp_to_ENSMUST00000098979,ENSMUST00000115596,ENSMUST00000161132,NM_176976,uc009ofu.2_5end | ||
|cluster_id=chr9:15162136..15162203,- | |||
|description=CAGE_peak_1_at_5830418K08Rik_5end | |description=CAGE_peak_1_at_5830418K08Rik_5end | ||
|id=chr9:15162136..15162203,- | |id=chr9:15162136..15162203,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.45e-11!29;UBERON:0002370!3.48e-08!23;UBERON:0000974!3.48e-08!23;UBERON:0004807!3.48e-08!23;UBERON:0005058!3.48e-08!23;UBERON:0003351!3.48e-08!23;UBERON:0009113!3.48e-08!23;UBERON:0003295!3.48e-08!23;UBERON:0009722!3.48e-08!23;UBERON:0005562!3.48e-08!23;UBERON:0007690!3.48e-08!23;UBERON:0006562!1.93e-07!24;UBERON:0001557!1.93e-07!24;UBERON:0001042!1.93e-07!24;UBERON:0008814!1.93e-07!24;UBERON:0009145!1.93e-07!24;UBERON:0002390!2.06e-07!45;UBERON:0003061!2.06e-07!45;UBERON:0003408!2.32e-07!24;UBERON:0002193!6.47e-07!48;UBERON:0000065!7.43e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.45e-11,29;UBERON:0005057,8.45e-11,29;UBERON:0002370,3.48e-08,23;UBERON:0000974,3.48e-08,23;UBERON:0004807,3.48e-08,23;UBERON:0005058,3.48e-08,23;UBERON:0003351,3.48e-08,23;UBERON:0009113,3.48e-08,23;UBERON:0003295,3.48e-08,23;UBERON:0009722,3.48e-08,23;UBERON:0005562,3.48e-08,23;UBERON:0007690,3.48e-08,23;UBERON:0000077,3.87e-08,35;UBERON:0000153,1.01e-07,43;UBERON:0001048,1.50e-07,134;UBERON:0006562,1.93e-07,24;UBERON:0001557,1.93e-07,24;UBERON:0001042,1.93e-07,24;UBERON:0008814,1.93e-07,24;UBERON:0009145,1.93e-07,24;UBERON:0002390,2.06e-07,45;UBERON:0003061,2.06e-07,45;UBERON:0003408,2.32e-07,24;UBERON:0002193,6.47e-07,48;UBERON:0002405,6.47e-07,48;UBERON:0000065,7.43e-07,41 | |||
|phase1_expression=14.4133962394315,2.09385244583617,3.18499467572675,6.0492842261366,4.00716583957078,9.73699777088961,10.5125688267987,26.3411579820816,15.9091256031383,17.7889040004715,26.7100030431788,26.0057238324797,32.5281386869291,27.7996879692412,34.9765249906446,42.1148556170838,53.1667027377391,29.9689057090326,36.0610960383093,28.00971701867,17.5189177711204,20.3546449961815,19.5899841854202,10.7194923271582,8.02932483735095,1.72269589234506,2.58457197695445,5.38678081714723,5.32065574477847,10.0812051903972,9.3126814475228,17.7808588568697,16.6067492647834,15.8481681015439,19.9307617628379,12.3013637565284,13.4751775133164,16.3227335987394,14.0640362014284,20.4174260149781,15.8822501768374,13.6609096991689,14.0798002379035,8.05739635043695,8.41428529121971,12.114085642671,5.47673941043627,4.14247797122848,1.97717564461025,3.88859798148567,3.77963338388479,1.43752564364972,24.4962604844295,18.859415692295,29.5762543245368,9.51859913333004,8.02293631828519,4.12537673821954,13.1505699558739,11.1088105647127,7.60597684207415,4.74382344896785,3.55717918444456,1.3498495759221,1.97773272513395,4.2628806896766,1.19840044207362,1.92109152660777,16.3829587447395,11.8805225731888,8.2026734927039,6.56997264128748,6.84692476950002,17.3936934885235,10.2554653989513,13.7882817991503,13.2139057199266,13.1517958227743,9.21639199537461,6.98997324970027,9.60620257825301,13.022834263919,5.30447698102624,6.19038871034848,10.8486755921535,15.6153150301044,16.7998583342941,12.6751623161204,7.95125029998433,16.7768863437064,22.3195656300292,6.0229671388697,2.719885334831,5.39703191637817,2.59910566979068,7.16843019355737,8.00533194750986,10.2258193546835,6.49465011507172,5.65343319216544,10.8449433228044,26.9485602570067,30.5766287647975,14.2213340630666,10.6080610095495,11.4011939463794,9.60496445528088,13.4736978068491,65.5112845627344,9.79718117827843,17.6955033301459,14.3098774806706,14.2981608298756,11.7563659631046,17.4031286560843,9.67632753238501,8.89901883843746,15.0383331196708,38.9228642857945,23.4561932423743,22.9675179198809,37.8202697445473,5.59175283654366,29.5708604981663,23.0391377494801,11.4955674843866,24.2026551501959,11.3981518888747,17.5356913360829,12.8819949888148,20.5875271268382,30.2826988592003,20.3374454624963,17.9000820131231,12.4672826735736,16.061885043708,22.4046600470696,23.6373244159177,10.6143558542143,11.3638602178696,25.1132454918018,14.7137346837423,20.5270827978098,31.4973069276644,34.0182495756639,37.0248651623216,25.2057639065671,19.9201595469042,13.7963515477019,32.5262457888649,27.0964731212481,20.8235945806196,35.0339534024253,20.1986256582857,23.2533814140976,25.6754204195856,26.6841011179029,16.9849618695712,12.5031939734061,17.3985648929822,21.8109235782419,15.4853372856473,17.5191104333056,21.6440654922144,21.1345944655708,18.1376476905318,17.9743178937745,17.7483320398098,18.9243827400503,15.595909087514,14.3491792896165,11.2573990317506,11.4166059951346,12.3469905259542,21.449574753541,28.0929591795446,9.91256348951394,14.2803305998314,28.3673373211861,28.1006372951131,22.8095406540105,21.781820659321,16.9007313322101,11.9842144450912,8.54152310780121,8.23494773620054,13.5721012752146,13.9269530428806,11.1129529657898,16.178749355776,8.42938394511308,11.5501938487533,7.77638393907635,27.1911460011155,24.7957018480777,30.1403965211065,25.7956807932942,22.02264744556,20.2356918797623,15.0562350939194,12.55989822731,10.8589504251184,6.81841042300442,31.867415191774,30.2700852474333,34.4039031948826,35.500521242988,29.9059678092997,18.5876871800436,23.3033871335157,23.3474726556051,18.6701760967895,15.814502718009,12.6527922207291,12.793544597697,11.8712072635143,10.225652570749,5.30687873499704,16.0735275444946,21.4125295300648,29.0077658066806,27.4987038955805,29.5709712843513,28.3085575076669,19.0434912708811,22.4403695036469,32.7881099740877,24.3611158613652,23.2803962239931,15.8947415274266,14.6782234586011,16.2006945611293,7.53956419696361,13.5976420954677,12.7858710984949,14.6246475541508,13.1651483789989,14.417037450841,7.21313759657372,12.6235463602186,20.5080342620567,26.5498346121714,32.098086262187,25.8086301788756,24.285055474981,24.3445816478396,31.1704240289669,20.4579100537918,26.4842811224171,21.5285282002611,19.3038515883245,9.25941139069727,22.6412873501471,18.1467135269789,13.2745138339963,15.2951800777638,16.6277956330613,14.5225911412042,7.08724542913855,9.53048958626175,15.7641258832615,17.0860852854428,19.9638531895444,12.6414703174326,10.5418608574999,12.3762651897824,9.87274856685985,21.2472090956946,6.59729287292048,15.2179294872431,20.5714671025037,14.6262430433698,19.5813334516524,6.08929898229199,15.9576761483323,8.26145076368899,7.93902232997863,29.3497530235834,27.1260236849121,29.9152107643653,24.2325858326367,23.9645713627789,13.1166376483433,14.4631735568198,34.0033052787727,20.6386867963223,27.9643736328265,47.8455880791915,53.8575257220839,35.6893950202175,18.5276488693302,19.0333975160175,19.0715963850105,3.81868247206045,23.2506955282134,31.1078784704079,21.6010681643603,18.8179466413022,19.2159056096636,19.9599232649535,15.7868100435392,6.54389854960074,13.9984171155136,9.32008969630389,27.6209539955253,29.1557264785759,19.0277264025662,22.9452402245976,16.9199368755828,22.9780330667458,23.7061622064423,27.9939427414493,34.4987243160589,42.2772211445511,29.955120650818,49.9297570592522,14.798940716182,19.3096599469875,26.3739270644924,35.9843658291638,30.9942913458773,36.1788303055106,40.171551391485,53.9160842723108,46.2575316395849,40.9354311655572,42.4916360025321,38.6771603394124,48.9714220140774,10.6563280299149,23.974482964399,16.9559188991909,16.9563462527719,14.1028403643499,11.4486310025221,17.2162526811229,17.5782070844834,8.52672576860118,23.1548255472997,22.0956113523445,25.2074025913335,18.5601436931183,17.8121455140367,21.1510291269116,19.5756525067224,17.5625269257446,19.0319811773366,21.7459330935764,19.8233833885777,34.7151639858897,25.0978400458577,22.6089246873513,16.3498266849826,10.2952364732008,19.1132185909389,21.8397160673228,17.0087181083662,18.9522908822848,26.8688057883654,26.0304351112785,20.7884146583139,22.6649039513237,24.7546871198693,28.1013277857013,23.6404024927505,18.1334667235883,27.1976694530182,27.8205959054011,24.0008476669791,26.6213709239006,25.989544704258,25.8716621605545,20.9863918326187,24.7074655043695,22.8659966090966,29.2007379696006,23.3583075814882,29.1793981262024,19.9306830448613,24.5276161115153,26.1907867628601,25.7195156368704,19.097754487133,12.2407183189594,15.9073493742878,21.7019764588781,15.4943548975763,17.4267221104417,21.0999730414584 | |phase1_expression=14.4133962394315,2.09385244583617,3.18499467572675,6.0492842261366,4.00716583957078,9.73699777088961,10.5125688267987,26.3411579820816,15.9091256031383,17.7889040004715,26.7100030431788,26.0057238324797,32.5281386869291,27.7996879692412,34.9765249906446,42.1148556170838,53.1667027377391,29.9689057090326,36.0610960383093,28.00971701867,17.5189177711204,20.3546449961815,19.5899841854202,10.7194923271582,8.02932483735095,1.72269589234506,2.58457197695445,5.38678081714723,5.32065574477847,10.0812051903972,9.3126814475228,17.7808588568697,16.6067492647834,15.8481681015439,19.9307617628379,12.3013637565284,13.4751775133164,16.3227335987394,14.0640362014284,20.4174260149781,15.8822501768374,13.6609096991689,14.0798002379035,8.05739635043695,8.41428529121971,12.114085642671,5.47673941043627,4.14247797122848,1.97717564461025,3.88859798148567,3.77963338388479,1.43752564364972,24.4962604844295,18.859415692295,29.5762543245368,9.51859913333004,8.02293631828519,4.12537673821954,13.1505699558739,11.1088105647127,7.60597684207415,4.74382344896785,3.55717918444456,1.3498495759221,1.97773272513395,4.2628806896766,1.19840044207362,1.92109152660777,16.3829587447395,11.8805225731888,8.2026734927039,6.56997264128748,6.84692476950002,17.3936934885235,10.2554653989513,13.7882817991503,13.2139057199266,13.1517958227743,9.21639199537461,6.98997324970027,9.60620257825301,13.022834263919,5.30447698102624,6.19038871034848,10.8486755921535,15.6153150301044,16.7998583342941,12.6751623161204,7.95125029998433,16.7768863437064,22.3195656300292,6.0229671388697,2.719885334831,5.39703191637817,2.59910566979068,7.16843019355737,8.00533194750986,10.2258193546835,6.49465011507172,5.65343319216544,10.8449433228044,26.9485602570067,30.5766287647975,14.2213340630666,10.6080610095495,11.4011939463794,9.60496445528088,13.4736978068491,65.5112845627344,9.79718117827843,17.6955033301459,14.3098774806706,14.2981608298756,11.7563659631046,17.4031286560843,9.67632753238501,8.89901883843746,15.0383331196708,38.9228642857945,23.4561932423743,22.9675179198809,37.8202697445473,5.59175283654366,29.5708604981663,23.0391377494801,11.4955674843866,24.2026551501959,11.3981518888747,17.5356913360829,12.8819949888148,20.5875271268382,30.2826988592003,20.3374454624963,17.9000820131231,12.4672826735736,16.061885043708,22.4046600470696,23.6373244159177,10.6143558542143,11.3638602178696,25.1132454918018,14.7137346837423,20.5270827978098,31.4973069276644,34.0182495756639,37.0248651623216,25.2057639065671,19.9201595469042,13.7963515477019,32.5262457888649,27.0964731212481,20.8235945806196,35.0339534024253,20.1986256582857,23.2533814140976,25.6754204195856,26.6841011179029,16.9849618695712,12.5031939734061,17.3985648929822,21.8109235782419,15.4853372856473,17.5191104333056,21.6440654922144,21.1345944655708,18.1376476905318,17.9743178937745,17.7483320398098,18.9243827400503,15.595909087514,14.3491792896165,11.2573990317506,11.4166059951346,12.3469905259542,21.449574753541,28.0929591795446,9.91256348951394,14.2803305998314,28.3673373211861,28.1006372951131,22.8095406540105,21.781820659321,16.9007313322101,11.9842144450912,8.54152310780121,8.23494773620054,13.5721012752146,13.9269530428806,11.1129529657898,16.178749355776,8.42938394511308,11.5501938487533,7.77638393907635,27.1911460011155,24.7957018480777,30.1403965211065,25.7956807932942,22.02264744556,20.2356918797623,15.0562350939194,12.55989822731,10.8589504251184,6.81841042300442,31.867415191774,30.2700852474333,34.4039031948826,35.500521242988,29.9059678092997,18.5876871800436,23.3033871335157,23.3474726556051,18.6701760967895,15.814502718009,12.6527922207291,12.793544597697,11.8712072635143,10.225652570749,5.30687873499704,16.0735275444946,21.4125295300648,29.0077658066806,27.4987038955805,29.5709712843513,28.3085575076669,19.0434912708811,22.4403695036469,32.7881099740877,24.3611158613652,23.2803962239931,15.8947415274266,14.6782234586011,16.2006945611293,7.53956419696361,13.5976420954677,12.7858710984949,14.6246475541508,13.1651483789989,14.417037450841,7.21313759657372,12.6235463602186,20.5080342620567,26.5498346121714,32.098086262187,25.8086301788756,24.285055474981,24.3445816478396,31.1704240289669,20.4579100537918,26.4842811224171,21.5285282002611,19.3038515883245,9.25941139069727,22.6412873501471,18.1467135269789,13.2745138339963,15.2951800777638,16.6277956330613,14.5225911412042,7.08724542913855,9.53048958626175,15.7641258832615,17.0860852854428,19.9638531895444,12.6414703174326,10.5418608574999,12.3762651897824,9.87274856685985,21.2472090956946,6.59729287292048,15.2179294872431,20.5714671025037,14.6262430433698,19.5813334516524,6.08929898229199,15.9576761483323,8.26145076368899,7.93902232997863,29.3497530235834,27.1260236849121,29.9152107643653,24.2325858326367,23.9645713627789,13.1166376483433,14.4631735568198,34.0033052787727,20.6386867963223,27.9643736328265,47.8455880791915,53.8575257220839,35.6893950202175,18.5276488693302,19.0333975160175,19.0715963850105,3.81868247206045,23.2506955282134,31.1078784704079,21.6010681643603,18.8179466413022,19.2159056096636,19.9599232649535,15.7868100435392,6.54389854960074,13.9984171155136,9.32008969630389,27.6209539955253,29.1557264785759,19.0277264025662,22.9452402245976,16.9199368755828,22.9780330667458,23.7061622064423,27.9939427414493,34.4987243160589,42.2772211445511,29.955120650818,49.9297570592522,14.798940716182,19.3096599469875,26.3739270644924,35.9843658291638,30.9942913458773,36.1788303055106,40.171551391485,53.9160842723108,46.2575316395849,40.9354311655572,42.4916360025321,38.6771603394124,48.9714220140774,10.6563280299149,23.974482964399,16.9559188991909,16.9563462527719,14.1028403643499,11.4486310025221,17.2162526811229,17.5782070844834,8.52672576860118,23.1548255472997,22.0956113523445,25.2074025913335,18.5601436931183,17.8121455140367,21.1510291269116,19.5756525067224,17.5625269257446,19.0319811773366,21.7459330935764,19.8233833885777,34.7151639858897,25.0978400458577,22.6089246873513,16.3498266849826,10.2952364732008,19.1132185909389,21.8397160673228,17.0087181083662,18.9522908822848,26.8688057883654,26.0304351112785,20.7884146583139,22.6649039513237,24.7546871198693,28.1013277857013,23.6404024927505,18.1334667235883,27.1976694530182,27.8205959054011,24.0008476669791,26.6213709239006,25.989544704258,25.8716621605545,20.9863918326187,24.7074655043695,22.8659966090966,29.2007379696006,23.3583075814882,29.1793981262024,19.9306830448613,24.5276161115153,26.1907867628601,25.7195156368704,19.097754487133,12.2407183189594,15.9073493742878,21.7019764588781,15.4943548975763,17.4267221104417,21.0999730414584 | ||
|short_description=p1@5830418K08Rik | |short_description=p1@5830418K08Rik | ||
}} | }} |
Latest revision as of 10:21, 26 September 2015
Short description: | p1@5830418K08Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_5830418K08Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:973 |
Association with transcript: | 28bp_to_ENSMUST00000098979, ENSMUST00000115596, ENSMUST00000161132, NM_176976, uc009ofu.2_5end |
EntrezGene: | 5830418K08Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 8.45e-11 | 29 |
immune organ | 8.45e-11 | 29 |
thymus | 3.48e-08 | 23 |
neck | 3.48e-08 | 23 |
respiratory system epithelium | 3.48e-08 | 23 |
hemolymphoid system gland | 3.48e-08 | 23 |
pharyngeal epithelium | 3.48e-08 | 23 |
thymic region | 3.48e-08 | 23 |
pharyngeal gland | 3.48e-08 | 23 |
entire pharyngeal arch endoderm | 3.48e-08 | 23 |
thymus primordium | 3.48e-08 | 23 |
early pharyngeal endoderm | 3.48e-08 | 23 |
mixed endoderm/mesoderm-derived structure | 3.87e-08 | 35 |
anterior region of body | 1.01e-07 | 43 |
primordium | 1.50e-07 | 134 |
pharynx | 1.93e-07 | 24 |
upper respiratory tract | 1.93e-07 | 24 |
chordate pharynx | 1.93e-07 | 24 |
pharyngeal arch system | 1.93e-07 | 24 |
pharyngeal region of foregut | 1.93e-07 | 24 |
hematopoietic system | 2.06e-07 | 45 |
blood island | 2.06e-07 | 45 |
gland of gut | 2.32e-07 | 24 |
hemolymphoid system | 6.47e-07 | 48 |
immune system | 6.47e-07 | 48 |
respiratory tract | 7.43e-07 | 41 |