FFCP PHASE1:Mm9::chr1:72895860..72895873,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=427 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:72895860..72895873,- | |||
|description=CAGE_peak_at_chr1:72895860..72895873,- | |description=CAGE_peak_at_chr1:72895860..72895873,- | ||
|id=chr1:72895860..72895873,- | |id=chr1:72895860..72895873,- | ||
|ontology_enrichment_celltype=CL:0002453!8.92e-13!8;CL:0000128!2.69e-10!6;CL:0000126!2.69e-10!6;CL:0000127!2.69e-10!6;CL:0000333!8.33e-10!10;CL:0000095!8.33e-10!10;CL:0000243!8.33e-10!10;CL:0000123!8.33e-10!10;CL:0000125!8.33e-10!10;CL:0000030!8.33e-10!10;CL:0000339!8.33e-10!10 | |ontology_enrichment_celltype=CL:0002453!8.92e-13!8;CL:0000128!2.69e-10!6;CL:0000126!2.69e-10!6;CL:0000127!2.69e-10!6;CL:0000333!8.33e-10!10;CL:0000095!8.33e-10!10;CL:0000243!8.33e-10!10;CL:0000123!8.33e-10!10;CL:0000125!8.33e-10!10;CL:0000030!8.33e-10!10;CL:0000339!8.33e-10!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.76e-31,6;CL:0000126,2.76e-31,6;CL:0000127,2.76e-31,6;CL:0002453,1.65e-23,8;CL:0000333,7.83e-19,10;CL:0000095,7.83e-19,10;CL:0000243,7.83e-19,10;CL:0000123,7.83e-19,10;CL:0000125,7.83e-19,10;CL:0000030,7.83e-19,10;CL:0000339,7.83e-19,10;CL:0002605,2.05e-16,2;CL:0002604,2.05e-16,2;CL:0002603,4.86e-16,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!1.68e-07!23;UBERON:0009856!1.68e-07!23 | |ontology_enrichment_uberon=UBERON:0009854!1.68e-07!23;UBERON:0009856!1.68e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,5.26e-15,23;UBERON:0009856,5.26e-15,23;UBERON:0002107,1.22e-11,22;UBERON:0007499,1.22e-11,22;UBERON:0006925,1.22e-11,22;UBERON:0009497,1.22e-11,22;UBERON:0000015,1.22e-11,22;UBERON:0002423,1.22e-11,22;UBERON:0006235,1.22e-11,22;UBERON:0008835,1.22e-11,22;UBERON:0003894,1.22e-11,22;UBERON:0004161,1.22e-11,22;UBERON:0008836,1.22e-11,22;UBERON:0002365,3.23e-10,25;UBERON:0002330,3.23e-10,25;UBERON:0001153,1.47e-08,1;UBERON:0001045,1.47e-08,1;UBERON:0002037,1.75e-08,4;UBERON:0002680,1.75e-08,4;UBERON:0001895,1.75e-08,4;UBERON:0010092,1.75e-08,4;UBERON:0006215,1.75e-08,4 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.25913075478431,3.2703773457067,12.0827400503959,10.4992145500113,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,0.103689612308478,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,1.45921704097532,2.47105271869273,4.31304619582064,2.60498663367952,1.24815069245824,1.01031551178845,0.179397413521912,0.964887042726734,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.325773918707152,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.25913075478431,3.2703773457067,12.0827400503959,10.4992145500113,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,0.103689612308478,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,1.45921704097532,2.47105271869273,4.31304619582064,2.60498663367952,1.24815069245824,1.01031551178845,0.179397413521912,0.964887042726734,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.325773918707152,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr1:72895860..72895873,- | |short_description=p@chr1:72895860..72895873,- | ||
}} | }} |
Latest revision as of 23:18, 5 August 2015
Short description: | p@chr1:72895860..72895873, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72895860..72895873, - |
Coexpression cluster: | MCL_coexpression_mm9:427 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.76e-31 | 6 |
macroglial cell | 2.76e-31 | 6 |
astrocyte | 2.76e-31 | 6 |
oligodendrocyte precursor cell | 1.65e-23 | 8 |
migratory neural crest cell | 7.83e-19 | 10 |
neuron associated cell | 7.83e-19 | 10 |
glial cell (sensu Vertebrata) | 7.83e-19 | 10 |
neuron associated cell (sensu Vertebrata) | 7.83e-19 | 10 |
glial cell | 7.83e-19 | 10 |
glioblast | 7.83e-19 | 10 |
glioblast (sensu Vertebrata) | 7.83e-19 | 10 |
astrocyte of the cerebral cortex | 2.05e-16 | 2 |
astrocyte of the hippocampus | 2.05e-16 | 2 |
astrocyte of the cerebellum | 4.86e-16 | 2 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 5.26e-15 | 23 |
sac | 5.26e-15 | 23 |
liver | 1.22e-11 | 22 |
epithelial sac | 1.22e-11 | 22 |
digestive gland | 1.22e-11 | 22 |
epithelium of foregut-midgut junction | 1.22e-11 | 22 |
anatomical boundary | 1.22e-11 | 22 |
hepatobiliary system | 1.22e-11 | 22 |
foregut-midgut junction | 1.22e-11 | 22 |
hepatic diverticulum | 1.22e-11 | 22 |
liver primordium | 1.22e-11 | 22 |
septum transversum | 1.22e-11 | 22 |
liver bud | 1.22e-11 | 22 |
exocrine gland | 3.23e-10 | 25 |
exocrine system | 3.23e-10 | 25 |
caecum | 1.47e-08 | 1 |
midgut | 1.47e-08 | 1 |
cerebellum | 1.75e-08 | 4 |
regional part of metencephalon | 1.75e-08 | 4 |
metencephalon | 1.75e-08 | 4 |
future metencephalon | 1.75e-08 | 4 |
rhombic lip | 1.75e-08 | 4 |