FFCP PHASE1:Mm9::chr9:46051084..46051095,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=191 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:46051084..46051095,+ | |||
|description=CAGE_peak_at_chr9:46051084..46051095,+ | |description=CAGE_peak_at_chr9:46051084..46051095,+ | ||
|id=chr9:46051084..46051095,+ | |id=chr9:46051084..46051095,+ | ||
|ontology_enrichment_celltype=CL:0000239!3.97e-12!6;CL:0000677!3.97e-12!6;CL:0000212!3.97e-12!6;CL:0000584!3.97e-12!6;CL:0000075!2.89e-10!7;CL:0002563!8.75e-08!9;CL:0002251!8.75e-08!9;CL:0000473!2.45e-07!3;CL:0000627!2.45e-07!3;CL:0000682!2.45e-07!3 | |ontology_enrichment_celltype=CL:0000239!3.97e-12!6;CL:0000677!3.97e-12!6;CL:0000212!3.97e-12!6;CL:0000584!3.97e-12!6;CL:0000075!2.89e-10!7;CL:0002563!8.75e-08!9;CL:0002251!8.75e-08!9;CL:0000473!2.45e-07!3;CL:0000627!2.45e-07!3;CL:0000682!2.45e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.82e-21,6;CL:0000677,8.82e-21,6;CL:0000584,8.82e-21,6;CL:0000075,9.55e-18,7;CL:0002563,1.08e-13,9;CL:0002251,1.08e-13,9;CL:0000066,6.09e-13,25;CL:0000682,4.51e-12,3;CL:0002076,5.28e-08,15;CL:0000223,5.69e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.80e-23!43;UBERON:0000344!1.73e-17!15;UBERON:0005409!3.82e-15!59;UBERON:0001242!1.01e-13!13;UBERON:0000060!1.01e-13!13;UBERON:0001262!1.01e-13!13;UBERON:0004786!1.01e-13!13;UBERON:0004923!2.11e-13!24;UBERON:0003350!8.75e-08!9;UBERON:0004808!8.75e-08!9;UBERON:0001277!8.75e-08!9;UBERON:0004119!3.07e-07!130;UBERON:0000925!3.07e-07!130;UBERON:0006595!3.07e-07!130;UBERON:0001007!8.31e-07!128;UBERON:0001555!8.31e-07!128;UBERON:0007026!8.31e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.75e-34,31;UBERON:0000344,1.83e-22,15;UBERON:0005409,3.94e-21,47;UBERON:0001242,3.07e-16,13;UBERON:0001262,3.07e-16,13;UBERON:0004786,3.07e-16,13;UBERON:0004923,3.68e-16,24;UBERON:0003350,1.08e-13,9;UBERON:0004808,1.08e-13,9;UBERON:0001277,1.08e-13,9;UBERON:0000485,4.13e-11,11;UBERON:0001007,5.58e-10,116;UBERON:0001555,5.58e-10,116;UBERON:0007026,5.58e-10,116;UBERON:0004119,9.59e-10,118;UBERON:0000925,9.59e-10,118;UBERON:0006595,9.59e-10,118;UBERON:0001962,4.93e-09,2;UBERON:0001961,4.93e-09,2;UBERON:0001744,4.93e-09,2;UBERON:0004921,8.91e-08,114 | |||
|phase1_expression=0,9.77131141390211,12.739978702907,1.20985684522732,4.00716583957078,1.6787927191189,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4792195477209,22.2527002635155,8.03924749761028,5.1691439539089,10.3426191689227,0.760093677825496,0.504060259519861,3.54768817048488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83962733820076,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,2.64450566663544,0,0,0,0.403367049246685,0.667134131534611,1.90225626112559,4.74529061544512,7.5761519173045,7.28872105520782,4.97391180102877,4.48417400373976,7.19055526923377,2.16138049874694,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.377252682772152,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.169229215783353,0,0.263069711437843,0,0.561142271657738,0,0,0,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=0,9.77131141390211,12.739978702907,1.20985684522732,4.00716583957078,1.6787927191189,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4792195477209,22.2527002635155,8.03924749761028,5.1691439539089,10.3426191689227,0.760093677825496,0.504060259519861,3.54768817048488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83962733820076,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,2.64450566663544,0,0,0,0.403367049246685,0.667134131534611,1.90225626112559,4.74529061544512,7.5761519173045,7.28872105520782,4.97391180102877,4.48417400373976,7.19055526923377,2.16138049874694,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.377252682772152,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.169229215783353,0,0.263069711437843,0,0.561142271657738,0,0,0,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p@chr9:46051084..46051095,+ | |short_description=p@chr9:46051084..46051095,+ | ||
}} | }} |
Latest revision as of 05:42, 5 August 2015
Short description: | p@chr9:46051084..46051095, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46051084..46051095, + |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.82e-21 | 6 |
gut absorptive cell | 8.82e-21 | 6 |
enterocyte | 8.82e-21 | 6 |
columnar/cuboidal epithelial cell | 9.55e-18 | 7 |
intestinal epithelial cell | 1.08e-13 | 9 |
epithelial cell of alimentary canal | 1.08e-13 | 9 |
epithelial cell | 6.09e-13 | 25 |
M cell of gut | 4.51e-12 | 3 |
endo-epithelial cell | 5.28e-08 | 15 |
endodermal cell | 5.69e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.75e-34 | 31 |
mucosa | 1.83e-22 | 15 |
gastrointestinal system | 3.94e-21 | 47 |
intestinal mucosa | 3.07e-16 | 13 |
wall of intestine | 3.07e-16 | 13 |
gastrointestinal system mucosa | 3.07e-16 | 13 |
organ component layer | 3.68e-16 | 24 |
epithelium of mucosa | 1.08e-13 | 9 |
gastrointestinal system epithelium | 1.08e-13 | 9 |
intestinal epithelium | 1.08e-13 | 9 |
simple columnar epithelium | 4.13e-11 | 11 |
digestive system | 5.58e-10 | 116 |
digestive tract | 5.58e-10 | 116 |
primitive gut | 5.58e-10 | 116 |
endoderm-derived structure | 9.59e-10 | 118 |
endoderm | 9.59e-10 | 118 |
presumptive endoderm | 9.59e-10 | 118 |
gut-associated lymphoid tissue | 4.93e-09 | 2 |
mucosa-associated lymphoid tissue | 4.93e-09 | 2 |
lymphoid tissue | 4.93e-09 | 2 |
subdivision of digestive tract | 8.91e-08 | 114 |