FFCP PHASE1:Mm9::chr1:97210184..97210254,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67698 | |EntrezGene=67698 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=247 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D3L0 | |UniProt=Q9D3L0 | ||
|association_with_transcript=0bp_to_ENSMUST00000059975,NM_026321,uc007cex.2,uc007cey.2_5end | |association_with_transcript=0bp_to_ENSMUST00000059975,NM_026321,uc007cex.2,uc007cey.2_5end | ||
|cluster_id=chr1:97210184..97210254,+ | |||
|description=CAGE_peak_1_at_Fam174a_5end | |description=CAGE_peak_1_at_Fam174a_5end | ||
|id=chr1:97210184..97210254,+ | |id=chr1:97210184..97210254,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.19e-14!102;UBERON:0000924!2.19e-14!102;UBERON:0006601!2.19e-14!102;UBERON:0004111!8.66e-13!122;UBERON:0000033!1.73e-12!63;UBERON:0000073!1.36e-11!75;UBERON:0001016!1.36e-11!75;UBERON:0002346!2.71e-11!71;UBERON:0003075!2.71e-11!71;UBERON:0007284!2.71e-11!71;UBERON:0001017!2.79e-11!73;UBERON:0005743!2.79e-11!73;UBERON:0000955!5.39e-11!50;UBERON:0006238!5.39e-11!50;UBERON:0001049!8.50e-11!52;UBERON:0005068!8.50e-11!52;UBERON:0006241!8.50e-11!52;UBERON:0007135!8.50e-11!52;UBERON:0000025!1.11e-10!114;UBERON:0002616!1.39e-10!49;UBERON:0000480!3.72e-08!308;UBERON:0000467!3.72e-08!308;UBERON:0000062!5.58e-08!269;UBERON:0003056!2.65e-07!49;UBERON:0003080!3.73e-07!40;UBERON:0002780!8.91e-07!39;UBERON:0001890!8.91e-07!39;UBERON:0006240!8.91e-07!39 | |ontology_enrichment_uberon=UBERON:0004121!2.19e-14!102;UBERON:0000924!2.19e-14!102;UBERON:0006601!2.19e-14!102;UBERON:0004111!8.66e-13!122;UBERON:0000033!1.73e-12!63;UBERON:0000073!1.36e-11!75;UBERON:0001016!1.36e-11!75;UBERON:0002346!2.71e-11!71;UBERON:0003075!2.71e-11!71;UBERON:0007284!2.71e-11!71;UBERON:0001017!2.79e-11!73;UBERON:0005743!2.79e-11!73;UBERON:0000955!5.39e-11!50;UBERON:0006238!5.39e-11!50;UBERON:0001049!8.50e-11!52;UBERON:0005068!8.50e-11!52;UBERON:0006241!8.50e-11!52;UBERON:0007135!8.50e-11!52;UBERON:0000025!1.11e-10!114;UBERON:0002616!1.39e-10!49;UBERON:0000480!3.72e-08!308;UBERON:0000467!3.72e-08!308;UBERON:0000062!5.58e-08!269;UBERON:0003056!2.65e-07!49;UBERON:0003080!3.73e-07!40;UBERON:0002780!8.91e-07!39;UBERON:0001890!8.91e-07!39;UBERON:0006240!8.91e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.98e-13,92;UBERON:0004121,6.29e-13,95;UBERON:0000924,6.29e-13,95;UBERON:0006601,6.29e-13,95;UBERON:0004111,8.66e-13,122;UBERON:0000073,1.20e-11,54;UBERON:0001016,1.36e-11,75;UBERON:0001017,2.79e-11,73;UBERON:0001049,8.50e-11,52;UBERON:0005068,8.50e-11,52;UBERON:0006241,8.50e-11,52;UBERON:0007135,8.50e-11,52;UBERON:0000025,1.11e-10,114;UBERON:0010371,1.48e-10,73;UBERON:0002346,5.18e-10,64;UBERON:0003075,5.18e-10,64;UBERON:0007284,5.18e-10,64;UBERON:0000955,1.05e-09,47;UBERON:0006238,1.05e-09,47;UBERON:0002616,2.62e-09,46;UBERON:0003056,2.65e-07,49;UBERON:0003080,3.73e-07,40;UBERON:0002780,8.91e-07,39;UBERON:0001890,8.91e-07,39;UBERON:0006240,8.91e-07,39 | |||
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| ||
|short_description=p1@Fam174a | |short_description=p1@Fam174a | ||
}} | }} |
Latest revision as of 20:23, 1 October 2015
Short description: | p1@Fam174a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam174a_5end |
Coexpression cluster: | MCL_coexpression_mm9:247 |
Association with transcript: | 0bp_to_ENSMUST00000059975, NM_026321, uc007cex.2, uc007cey.2_5end |
EntrezGene: | Fam174a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.98e-13 | 92 |
ectoderm-derived structure | 6.29e-13 | 95 |
ectoderm | 6.29e-13 | 95 |
presumptive ectoderm | 6.29e-13 | 95 |
anatomical conduit | 8.66e-13 | 122 |
regional part of nervous system | 1.20e-11 | 54 |
nervous system | 1.36e-11 | 75 |
central nervous system | 2.79e-11 | 73 |
neural tube | 8.50e-11 | 52 |
neural rod | 8.50e-11 | 52 |
future spinal cord | 8.50e-11 | 52 |
neural keel | 8.50e-11 | 52 |
tube | 1.11e-10 | 114 |
ecto-epithelium | 1.48e-10 | 73 |
neurectoderm | 5.18e-10 | 64 |
neural plate | 5.18e-10 | 64 |
presumptive neural plate | 5.18e-10 | 64 |
brain | 1.05e-09 | 47 |
future brain | 1.05e-09 | 47 |
regional part of brain | 2.62e-09 | 46 |
pre-chordal neural plate | 2.65e-07 | 49 |
anterior neural tube | 3.73e-07 | 40 |
regional part of forebrain | 8.91e-07 | 39 |
forebrain | 8.91e-07 | 39 |
future forebrain | 8.91e-07 | 39 |