Personal tools

FFCP PHASE1:Mm9::chr9:72510208..72510219,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=17999
|EntrezGene=17999
|HGNC=
|HGNC=
|MCL_coexpression_id=417
|TSSclassifier=NA
|UniProt=B2RSC8,P46935
|UniProt=B2RSC8,P46935
|association_with_transcript=54bp_to_NM_010890,uc009qqe.1_5end
|association_with_transcript=54bp_to_NM_010890,uc009qqe.1_5end
|cluster_id=chr9:72510208..72510219,+
|description=CAGE_peak_3_at_Nedd4_5end
|description=CAGE_peak_3_at_Nedd4_5end
|id=chr9:72510208..72510219,+
|id=chr9:72510208..72510219,+
|ontology_enrichment_celltype=CL:0000393!6.65e-07!39;CL:0000211!6.65e-07!39
|ontology_enrichment_celltype=CL:0000393!6.65e-07!39;CL:0000211!6.65e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000393,6.64e-07,39;CL:0000211,6.64e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!2.13e-11!333;UBERON:0000922!9.85e-09!328;UBERON:0004121!6.27e-08!102;UBERON:0000924!6.27e-08!102;UBERON:0006601!6.27e-08!102
|ontology_enrichment_uberon_v019_2=UBERON:0000922,7.31e-08,320;UBERON:0010314,8.66e-08,92;UBERON:0004121,5.56e-07,95;UBERON:0000924,5.56e-07,95;UBERON:0006601,5.56e-07,95
|phase1_expression=30.4282809499109,3.14077866875425,3.63999391511629,1.81478526784098,4.00716583957078,6.37941233265181,7.2419918584613,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0,4.66353666541928,3.84703008040669,5.59649502502517,3.78554598429885,2.60517423850904,1.69755860719212,9.95006494767516,6.95036658406197,7.57479388502913,6.87967418011649,4.35877634027623,5.16808767703518,5.1691439539089,6.89507944594845,7.9809836171677,4.28451220591882,6.20845429834853,6.98533740805594,6.76571266343027,0,7.51014211353314,6.81562045969819,5.9209113316087,2.09265815368454,0.7813353445238,5.23523743973798,2.94115744015507,0,3.88408282424923,22.2837367816772,22.6070556619517,25.1459050461504,13.3006528539167,20.494364699762,12.9614847813338,24.1093074852111,36.5364560442196,12.9377307928474,1.34226084846189,0,0,26.2404624756666,31.805211833202,20.1112115988203,29.1335703637821,29.6234948392338,26.6209189472595,16.9422266034566,13.3394219416671,1.3498495759221,2.96659908770092,0,8.08920298399693,8.06858441175265,25.1965757909601,22.1409738863973,25.4493203235172,17.424710048632,20.9825113904033,29.275301012374,29.5204050736168,26.6573448116906,18.7196997698961,15.7055425844781,17.9719643909805,34.02666223439,33.2100146276747,29.6920621217353,14.7966989470732,18.5711661310454,15.8910177687883,27.6950870345248,32.3183715413964,30.5695091153493,14.2365243466386,26.6011891575885,18.8411917656091,7.74381489283248,4.0798280022465,12.4131734076698,12.9955283489534,17.4730485967961,9.26933172869562,19.4290567738986,15.3273742715693,13.0735642568826,22.9574774235989,43.6310023208681,20.3844191765317,14.2213340630666,23.8140145112336,16.9751109868316,17.6933555755174,7.19358442230078,4.14300613835475,16.7739617143252,24.8084017275574,31.9688752227748,25.3677046981664,27.4315205805773,36.0997330906614,19.2269884734403,28.427421289453,25.0156887471447,5.30766331169925,26.6915302413225,10.8212344045593,12.1218813283806,5.59175283654366,21.6657789788545,26.5997317653088,7.66371165625774,5.87094110079009,2.99951365496704,3.68503658511888,18.574039286198,20.5875271268382,29.9057358028617,19.2944995413427,15.5986428971502,16.6230435647648,17.5220564113178,34.8290624368082,16.048499208702,13.8997517138521,23.3590460033986,28.4963770088321,24.1397209655147,34.031742533211,30.4423732028144,33.8821765773613,27.5444498612427,30.1719553082327,31.8205146008989,36.6465587985832,31.391609307858,34.6623714602979,37.2632745126877,30.5851974148158,30.2979384874285,25.7227670509929,30.651277090048,1.40442637462647,2.57347907114715,5.11494298912067,30.4474885627188,32.5991223373724,30.6105504483725,35.7484550733667,26.7599355176469,27.6138132068407,23.7184623645416,24.681152928765,24.5207218971056,15.4686258918672,19.043425833175,18.3215509573634,12.5731989185786,17.344459107993,14.6284996448805,20.6084149592845,23.6680608472354,0.991256348951394,9.25576983322405,28.7939138222566,25.5460339046482,26.5466970323512,24.4037064794244,24.6839628667806,16.5496294717926,8.0669940462567,17.2933902460211,19.3528110776208,21.8852119245266,18.5215882763164,12.5834717211591,7.13255564586491,7.16908583715722,22.1911444115106,31.9895835307241,42.8289395557706,26.6783239477362,28.3170631264734,28.6855503351403,21.373949547999,12.8420828742254,12.8738956829927,12.7099078839455,11.858105083486,11.6791574001266,16.3143965943958,9.89393294493356,10.7515864335907,10.8529721888588,9.67578236769395,12.6586300478357,13.781494275878,8.51140380883053,51.7565543498476,17.8627654880882,13.7296576170407,8.84026072814891,13.8136008411872,14.473305640901,14.2259956428286,29.9396430597366,28.6818358537966,32.2515662972857,33.5607055052558,35.1763140627813,27.6130623427776,23.2209040950781,30.1083125242825,23.4752571027701,23.1209414553356,16.877921415721,14.850908440467,17.2132379711999,0,0,11.8023425524569,29.2492951083016,19.1055202085472,19.5743516608979,26.0656563148914,13.8859009962405,29.0267561862956,30.0637833108412,36.8374010123086,30.1100685420216,32.9742037641943,28.0245765480944,28.7415598189175,34.7784470914461,32.4135977916149,20.2432429345738,34.349500620401,33.476333489444,39.7444180822726,30.8494129958641,33.1862845849907,24.5208442516531,25.6975023420038,24.141450208755,22.147641966058,25.8245524272899,18.8652654012801,23.2661586865604,18.8943610543902,18.3301319602773,17.9211634577498,14.4389760547462,25.8734100372879,32.7711191136985,25.4836607052026,27.4351404840438,34.9360260275279,39.9546151428638,36.0362355118645,24.9661258273971,20.8857820176702,22.6660315824288,22.2733682035512,19.7863503529776,28.9021323785671,23.3411019471963,18.2639686324799,17.2347944732314,11.659233465194,14.4631735568198,3.75915937755276,23.7344898157706,18.7046472643409,7.53473828018764,8.20165366326151,6.40578884978263,7.64902934972349,7.41742697315387,6.35719879500349,4.77335309007557,27.9957354319305,30.7012395361542,25.3812550931233,27.5996550739099,24.6749697033181,24.4104466956525,24.3001159832488,15.1818446350737,11.1468877030942,15.5334828271731,6.76431526421028,37.5286530570387,31.2716546963915,32.0844460767679,34.098193398121,36.8324353569896,44.830465162678,29.0355778202009,27.4731482395362,13.7702948870823,10.657110231541,3.47612232690996,19.8670710984361,24.7533406767234,13.6416864126685,12.5318686967237,10.9274745129696,10.5771995577573,8.12292399460175,7.67345019605922,7.46826705218998,7.15865914471568,6.52967800956341,4.81059208201647,6.07759891344159,14.0572837841431,15.9829886429327,9.86852422704233,24.5111539891555,23.375940877895,20.2697073487277,29.8537147555642,20.7937327706694,20.5644562654499,15.2482997506608,18.8733346967943,20.6242384838183,17.3571714167124,15.7568979547248,15.8632718451837,18.2256075062588,15.3109209096235,15.8599843144472,21.7459330935764,37.4672324778878,30.7249152518794,24.0734384113329,24.5537784238977,31.8612007194533,25.1865606576519,28.0030877030035,25.5483470976229,24.0689407193861,23.5008406940332,24.5874920893533,23.7669190146456,24.0658674197598,25.4179855047331,25.6162191542035,32.387971007249,24.6833614262542,21.605832691935,23.9009822465918,31.7949667490298,23.3151091622082,26.79884673006,23.6051828047848,29.5053225763627,28.5151422658452,26.2305284464197,23.7806364734604,29.7268773924762,24.4447404922551,29.1793981262024,28.8283094041743,21.7694906049995,24.9630936333511,26.1843261604283,27.0069255373598,24.7312472158566,24.3288872783225,33.3050133774862,32.1364397875657,24.0444646840272,21.7955765483196
|phase1_expression=30.4282809499109,3.14077866875425,3.63999391511629,1.81478526784098,4.00716583957078,6.37941233265181,7.2419918584613,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0,4.66353666541928,3.84703008040669,5.59649502502517,3.78554598429885,2.60517423850904,1.69755860719212,9.95006494767516,6.95036658406197,7.57479388502913,6.87967418011649,4.35877634027623,5.16808767703518,5.1691439539089,6.89507944594845,7.9809836171677,4.28451220591882,6.20845429834853,6.98533740805594,6.76571266343027,0,7.51014211353314,6.81562045969819,5.9209113316087,2.09265815368454,0.7813353445238,5.23523743973798,2.94115744015507,0,3.88408282424923,22.2837367816772,22.6070556619517,25.1459050461504,13.3006528539167,20.494364699762,12.9614847813338,24.1093074852111,36.5364560442196,12.9377307928474,1.34226084846189,0,0,26.2404624756666,31.805211833202,20.1112115988203,29.1335703637821,29.6234948392338,26.6209189472595,16.9422266034566,13.3394219416671,1.3498495759221,2.96659908770092,0,8.08920298399693,8.06858441175265,25.1965757909601,22.1409738863973,25.4493203235172,17.424710048632,20.9825113904033,29.275301012374,29.5204050736168,26.6573448116906,18.7196997698961,15.7055425844781,17.9719643909805,34.02666223439,33.2100146276747,29.6920621217353,14.7966989470732,18.5711661310454,15.8910177687883,27.6950870345248,32.3183715413964,30.5695091153493,14.2365243466386,26.6011891575885,18.8411917656091,7.74381489283248,4.0798280022465,12.4131734076698,12.9955283489534,17.4730485967961,9.26933172869562,19.4290567738986,15.3273742715693,13.0735642568826,22.9574774235989,43.6310023208681,20.3844191765317,14.2213340630666,23.8140145112336,16.9751109868316,17.6933555755174,7.19358442230078,4.14300613835475,16.7739617143252,24.8084017275574,31.9688752227748,25.3677046981664,27.4315205805773,36.0997330906614,19.2269884734403,28.427421289453,25.0156887471447,5.30766331169925,26.6915302413225,10.8212344045593,12.1218813283806,5.59175283654366,21.6657789788545,26.5997317653088,7.66371165625774,5.87094110079009,2.99951365496704,3.68503658511888,18.574039286198,20.5875271268382,29.9057358028617,19.2944995413427,15.5986428971502,16.6230435647648,17.5220564113178,34.8290624368082,16.048499208702,13.8997517138521,23.3590460033986,28.4963770088321,24.1397209655147,34.031742533211,30.4423732028144,33.8821765773613,27.5444498612427,30.1719553082327,31.8205146008989,36.6465587985832,31.391609307858,34.6623714602979,37.2632745126877,30.5851974148158,30.2979384874285,25.7227670509929,30.651277090048,1.40442637462647,2.57347907114715,5.11494298912067,30.4474885627188,32.5991223373724,30.6105504483725,35.7484550733667,26.7599355176469,27.6138132068407,23.7184623645416,24.681152928765,24.5207218971056,15.4686258918672,19.043425833175,18.3215509573634,12.5731989185786,17.344459107993,14.6284996448805,20.6084149592845,23.6680608472354,0.991256348951394,9.25576983322405,28.7939138222566,25.5460339046482,26.5466970323512,24.4037064794244,24.6839628667806,16.5496294717926,8.0669940462567,17.2933902460211,19.3528110776208,21.8852119245266,18.5215882763164,12.5834717211591,7.13255564586491,7.16908583715722,22.1911444115106,31.9895835307241,42.8289395557706,26.6783239477362,28.3170631264734,28.6855503351403,21.373949547999,12.8420828742254,12.8738956829927,12.7099078839455,11.858105083486,11.6791574001266,16.3143965943958,9.89393294493356,10.7515864335907,10.8529721888588,9.67578236769395,12.6586300478357,13.781494275878,8.51140380883053,51.7565543498476,17.8627654880882,13.7296576170407,8.84026072814891,13.8136008411872,14.473305640901,14.2259956428286,29.9396430597366,28.6818358537966,32.2515662972857,33.5607055052558,35.1763140627813,27.6130623427776,23.2209040950781,30.1083125242825,23.4752571027701,23.1209414553356,16.877921415721,14.850908440467,17.2132379711999,0,0,11.8023425524569,29.2492951083016,19.1055202085472,19.5743516608979,26.0656563148914,13.8859009962405,29.0267561862956,30.0637833108412,36.8374010123086,30.1100685420216,32.9742037641943,28.0245765480944,28.7415598189175,34.7784470914461,32.4135977916149,20.2432429345738,34.349500620401,33.476333489444,39.7444180822726,30.8494129958641,33.1862845849907,24.5208442516531,25.6975023420038,24.141450208755,22.147641966058,25.8245524272899,18.8652654012801,23.2661586865604,18.8943610543902,18.3301319602773,17.9211634577498,14.4389760547462,25.8734100372879,32.7711191136985,25.4836607052026,27.4351404840438,34.9360260275279,39.9546151428638,36.0362355118645,24.9661258273971,20.8857820176702,22.6660315824288,22.2733682035512,19.7863503529776,28.9021323785671,23.3411019471963,18.2639686324799,17.2347944732314,11.659233465194,14.4631735568198,3.75915937755276,23.7344898157706,18.7046472643409,7.53473828018764,8.20165366326151,6.40578884978263,7.64902934972349,7.41742697315387,6.35719879500349,4.77335309007557,27.9957354319305,30.7012395361542,25.3812550931233,27.5996550739099,24.6749697033181,24.4104466956525,24.3001159832488,15.1818446350737,11.1468877030942,15.5334828271731,6.76431526421028,37.5286530570387,31.2716546963915,32.0844460767679,34.098193398121,36.8324353569896,44.830465162678,29.0355778202009,27.4731482395362,13.7702948870823,10.657110231541,3.47612232690996,19.8670710984361,24.7533406767234,13.6416864126685,12.5318686967237,10.9274745129696,10.5771995577573,8.12292399460175,7.67345019605922,7.46826705218998,7.15865914471568,6.52967800956341,4.81059208201647,6.07759891344159,14.0572837841431,15.9829886429327,9.86852422704233,24.5111539891555,23.375940877895,20.2697073487277,29.8537147555642,20.7937327706694,20.5644562654499,15.2482997506608,18.8733346967943,20.6242384838183,17.3571714167124,15.7568979547248,15.8632718451837,18.2256075062588,15.3109209096235,15.8599843144472,21.7459330935764,37.4672324778878,30.7249152518794,24.0734384113329,24.5537784238977,31.8612007194533,25.1865606576519,28.0030877030035,25.5483470976229,24.0689407193861,23.5008406940332,24.5874920893533,23.7669190146456,24.0658674197598,25.4179855047331,25.6162191542035,32.387971007249,24.6833614262542,21.605832691935,23.9009822465918,31.7949667490298,23.3151091622082,26.79884673006,23.6051828047848,29.5053225763627,28.5151422658452,26.2305284464197,23.7806364734604,29.7268773924762,24.4447404922551,29.1793981262024,28.8283094041743,21.7694906049995,24.9630936333511,26.1843261604283,27.0069255373598,24.7312472158566,24.3288872783225,33.3050133774862,32.1364397875657,24.0444646840272,21.7955765483196
|short_description=p3@Nedd4
|short_description=p3@Nedd4
}}
}}

Latest revision as of 02:30, 27 September 2015

Short description:p3@Nedd4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nedd4_5end
Coexpression cluster:MCL_coexpression_mm9:417
Association with transcript: 54bp_to_NM_010890, uc009qqe.1_5end
EntrezGene:Nedd4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nedd4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G730.43
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.38
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.24
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.36
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I15.17
GP2+ M cell, pool3.CNhs13240.11847-124I26.90
Ileum epithelium, pool1.CNhs13199.10252-104B97.98
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.92
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D822.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D922.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B325.15
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B713.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.96
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C324.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C436.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C126.24
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E131.81
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C520.11
Mouse Granule cells, donor1.CNhs12131.11713-123C329.13
Mouse Granule cells, donor2.CNhs12357.11731-123E329.62
Mouse Granule cells, donor3.CNhs12108.11636-122C726.62
Mouse Meningeal cells, donor1.CNhs12132.11716-123C616.94
Mouse Meningeal cells, donor3.CNhs12109.11639-122D113.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D525.20
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D925.45
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D229.28
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F229.52
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.71
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.97
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D434.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F433.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D829.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.80
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.70
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F632.32
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E130.57
Mouse Schwann, donor1.CNhs12507.11728-123D914.24
Mouse Schwann, donor2.CNhs12573.11746-123F926.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G318.84
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.41
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F617.47
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I719.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E315.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I813.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H143.63
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G123.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G216.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.69
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.19
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D716.77
adrenal gland, embryo E14.CNhs11038.406-44C524.81
adrenal gland, embryo E16.CNhs11004.1254-43D631.97
adrenal gland, embryo E17.CNhs11043.1263-45I125.37
adrenal gland, embryo E18.CNhs11026.1262-18F527.43
adrenal gland, neonate N00.CNhs11191.1311-23C136.10
adrenal gland, neonate N25.CNhs11223.1377-27I319.23
amnion, adult pregnant day17.5.CNhs10488.583-22A828.43
aorta, adult.CNhs10498.46-23H125.02
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F526.69
bone (os femoris), neonate N16.CNhs11225.1525-43A610.82
bone (os femoris), neonate N20.CNhs11195.1350-25C312.12
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B221.67
cerebellum, neonate N30.CNhs11135.1395-42I226.60
colon, adult.CNhs10468.36-18H77.66
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.87
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.69
corpora quadrigemina, adult.CNhs10501.16-22A418.57
corpus striatum, adult.CNhs10487.19-21D820.59
corpus striatum, neonate N00.CNhs11226.630-43F129.91
cortex, adult.CNhs10473.12-14D519.29
cortex, neonate N30.CNhs11107.1392-42F215.60
diencephalon, adult.CNhs10482.20-12F216.62
diencephalon, neonate N30.CNhs11201.1388-42B217.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B134.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.05
epididymis, adult.CNhs10490.58-23B213.90
eyeball, adult.CNhs10484.31-12G423.36
eyeball, embryo E12.CNhs11016.345-16C628.50
eyeball, embryo E14.CNhs10521.399-16E224.14
eyeball, embryo E15.CNhs10593.426-16C934.03
eyeball, embryo E17.CNhs11023.1261-18D430.44
eyeball, neonate N00.CNhs11207.633-15C633.88
eyeball, neonate N01.CNhs11140.1532-43E727.54
eyeball, neonate N02.CNhs11205.1551-44G830.17
eyeball, neonate N16.CNhs11188.777-19A231.82
forelimb, embryo E11.CNhs10596.335-25E236.65
forelimb, embryo E12.CNhs10600.359-14H231.39
forelimb, embryo E13.CNhs10589.384-1E234.66
forelimb, embryo E14.CNhs10577.413-26A837.26
forelimb, embryo E15.CNhs11007.437-20E730.59
forelimb, embryo E17.CNhs10598.1517-43C430.30
forelimb, embryo E18.CNhs11008.1520-43B525.72
gonad, embryo E13.CNhs11044.1564-45I630.65
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.11
heart, embryo E11.CNhs10586.331-24E930.45
heart, embryo E12.CNhs11015.353-12F532.60
heart, embryo E13.CNhs11013.376-3I930.61
heart, embryo E14.CNhs10597.403-26D435.75
heart, embryo E15.CNhs11017.431-16C826.76
heart, embryo E16.CNhs11021.457-17C627.61
heart, embryo E17.CNhs11025.479-18E523.72
heart, embryo E18.CNhs11030.1283-20G324.68
heart, neonate N00.CNhs11213.639-21E324.52
heart, neonate N03.CNhs11221.1349-25I215.47
heart, neonate N10.CNhs11118.749-24G119.04
heart, neonate N16.CNhs11209.782-15G118.32
heart, neonate N20.CNhs11127.821-26I612.57
heart, neonate N25.CNhs11196.1351-25D317.34
heart, neonate N30.CNhs11202.1390-42D214.63
hippocampus, adult.CNhs10478.13-16E820.61
hippocampus, neonate N00.CNhs11228.627-43G123.67
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A39.26
intestine, embryo E12.CNhs11019.1251-16I528.79
intestine, embryo E13.CNhs11010.381-16D525.55
intestine, embryo E15.CNhs10602.976-16D826.55
intestine, embryo E16.CNhs10585.463-22H424.40
intestine, embryo E17.CNhs10582.482-18D324.68
intestine, embryo E18.CNhs10526.1289-20F716.55
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E917.29
intestine, neonate N06.CNhs11102.688-20B819.35
intestine, neonate N07.CNhs11095.720-20F221.89
intestine, neonate N10.CNhs11098.755-23A518.52
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E37.13
intestine, neonate N30.CNhs11131.1384-42G17.17
kidney, embryo E14.CNhs10606.411-4I922.19
kidney, embryo E15.CNhs10997.434-16F831.99
kidney, embryo E16.CNhs10584.464-22A542.83
kidney, embryo E17.CNhs11028.483-18I226.68
kidney, embryo E18.CNhs11001.1288-20C728.32
kidney, neonate N00.CNhs11214.646-21G728.69
kidney, neonate N10.CNhs11206.758-6D521.37
kidney, neonate N20.CNhs11113.832-19I112.84
kidney, neonate N25.CNhs11122.1353-25F312.87
kidney, neonate N30.CNhs11203.1385-42H112.71
liver, adult pregnant day01.CNhs10466.508-5B211.86
liver, embryo E12.CNhs10601.355-15F811.68
liver, embryo E13.CNhs10524.378-3H616.31
liver, embryo E14.CNhs10594.409-16E19.89
liver, embryo E15.CNhs10520.433-16D710.75
liver, embryo E16.CNhs10523.462-17F510.85
liver, embryo E17.CNhs10510.481-18A39.68
liver, embryo E18.CNhs10579.499-43G412.66
liver, neonate N00.CNhs11117.641-24F413.78
liver, neonate N03.CNhs11123.1345-25G28.51
liver, neonate N06.CNhs11101.684-20A851.76
liver, neonate N07.CNhs11103.716-20H217.86
liver, neonate N10.CNhs11115.751-24B913.73
liver, neonate N20.CNhs11220.823-25A38.84
liver, neonate N25.CNhs11198.1368-26H113.81
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B114.23
lung, embryo E12.CNhs10522.354-16G229.94
lung, embryo E14.CNhs10604.404-26F828.68
lung, embryo E15.CNhs11020.432-17C532.25
lung, embryo E16.CNhs10998.458-17B633.56
lung, embryo E17.CNhs10605.480-44A635.18
lung, embryo E18.CNhs10583.1287-20I627.61
lung, neonate N00.CNhs11224.640-42C623.22
lung, neonate N06.CNhs11212.683-20E530.11
lung, neonate N07.CNhs11111.715-19A323.48
lung, neonate N10.CNhs11219.750-23E623.12
lung, neonate N20.CNhs11109.822-18A416.88
lung, neonate N25.CNhs11119.1359-25C714.85
lung, neonate N30.CNhs11133.1394-42H217.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B611.80
mammary gland, adult pregnant day19.CNhs10476.588-5H229.25
medulla oblongata, adult.CNhs10477.17-12C219.11
medulla oblongata, neonate N30.CNhs11200.1396-42A319.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C726.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.89
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E129.03
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E230.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E336.84
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D730.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D832.97
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D928.02
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D428.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D534.78
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D632.41
olfactory brain, adult.CNhs10489.18-22I920.24
ovary, adult.CNhs10507.91-2I734.35
ovary, embryo E18.CNhs11040.505-44H733.48
ovary, neonate N00.CNhs11217.1299-22I439.74
oviduct, adult pregnant day01.CNhs10500.988-6G630.85
pancreas, adult.CNhs10486.34-16E433.19
pancreas, embryo E14.CNhs11012.405-44F424.52
pancreas, embryo E15.CNhs11042.1556-45F225.70
pancreas, embryo E16.CNhs11003.460-26E524.14
pancreas, embryo E17.CNhs10599.1558-45G322.15
pancreas, embryo E18.CNhs10580.1535-43I725.82
pancreas, neonate N00.CNhs11105.645-26G918.87
pancreas, neonate N01.CNhs11138.1531-43D723.27
pancreas, neonate N02.CNhs11139.1539-43D818.89
pancreas, neonate N16.CNhs11136.787-43B618.33
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G825.87
pituitary gland, embryo E12.CNhs11018.346-16E632.77
pituitary gland, embryo E13.CNhs11009.370-44C725.48
pituitary gland, embryo E14.CNhs11037.398-44A527.44
pituitary gland, embryo E15.CNhs10592.427-16B934.94
pituitary gland, embryo E16.CNhs11036.449-43F639.95
pituitary gland, embryo E17.CNhs11039.1265-44F536.04
pituitary gland, neonate N00.CNhs11190.1308-22E924.97
placenta, adult pregnant day10.CNhs10472.539-13I720.89
placenta, adult pregnant day17.CNhs10464.577-18G322.67
prostate, adult.CNhs10470.859-1F822.27
skin, adult.CNhs10492.30-1C319.79
skin, neonate N00.CNhs11124.650-25G428.90
skin, neonate N03.CNhs11215.662-22H323.34
skin, neonate N06.CNhs11097.693-20I518.26
skin, neonate N10.CNhs11108.762-6C417.23
small intestine, neonate N16.CNhs11114.790-21I111.66
spinal cord, adult.CNhs10505.24-13C914.46
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C123.73
spleen, embryo E18.CNhs11011.1271-21F218.70
spleen, neonate N10.CNhs11116.752-24D17.53
spleen, neonate N20.CNhs11112.824-19H18.20
spleen, neonate N25.CNhs11099.1354-25G36.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.36
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E328.00
stomach, embryo E15.CNhs10603.1252-16G830.70
stomach, embryo E16.CNhs11022.459-17D425.38
stomach, embryo E17.CNhs11006.1035-18D527.60
stomach, embryo E18.CNhs10999.1286-20C624.67
stomach, neonate N03.CNhs11193.1340-24B824.41
stomach, neonate N07.CNhs11210.718-18A924.30
stomach, neonate N25.CNhs11104.1355-25E415.18
stomach, neonate N30.CNhs11134.1386-42I111.15
submandibular gland, adult.CNhs10469.59-29C115.53
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F537.53
testis, embryo E15.CNhs11034.443-27C531.27
testis, embryo E16.CNhs11033.470-26G532.08
testis, embryo E17.CNhs11029.486-18I534.10
testis, embryo E18.CNhs11027.503-18G536.83
testis, neonate N00.CNhs11189.1300-22B744.83
testis, neonate N07.CNhs11222.726-26I429.04
testis, neonate N10.CNhs11204.763-44D927.47
testis, neonate N20.CNhs11110.839-18H313.77
testis, neonate N30.CNhs11130.1391-42E210.66
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I419.87
thymus, embryo E15.CNhs11005.430-45I224.75
thymus, embryo E16.CNhs11002.456-26C513.64
thymus, embryo E17.CNhs10581.478-18C112.53
thymus, embryo E18.CNhs10595.1273-19G410.93
thymus, neonate N02.CNhs11181.1541-43F810.58
thymus, neonate N03.CNhs11137.2104-43C78.12
thymus, neonate N06.CNhs11197.681-26C47.67
thymus, neonate N07.CNhs11211.713-19D37.47
thymus, neonate N10.CNhs11194.748-24E47.16
thymus, neonate N20.CNhs11186.820-7A26.53
thymus, neonate N25.CNhs11125.1362-25G74.81
thymus, neonate N30.CNhs11132.1393-42G26.08
tongue, adult.CNhs10499.32-1B414.06
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.98
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G524.51
urinary bladder, adult.CNhs10481.879-12E423.38
uterus, adult pregnant day19.CNhs10497.590-15F520.27
uterus, adult.CNhs10509.92-27E529.85
vagina, adult.CNhs10502.89-27D520.79
vesicular gland, adult.CNhs10491.51-27F820.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.62
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.31
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.86
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.75
whole body, embryo E11.CNhs11014.324-5I837.47
whole body, embryo E12.CNhs10587.857-27C930.72
whole body, embryo E13.CNhs10512.372-23H224.07
whole body, embryo E14.5.CNhs10578.420-27D224.55
whole body, embryo E14.CNhs10519.395-14B131.86
whole body, embryo E16.CNhs10514.453-14F225.19
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G528.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G525.55
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G524.07
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G523.50
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G524.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G523.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G524.07
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G525.42
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G525.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G532.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G524.68
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.90
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G531.79
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G523.32
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G526.80
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G523.61
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G529.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G528.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G526.23
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G523.78
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G529.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G524.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G529.18
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G528.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G521.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G524.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G526.18
whole body, embryo E17.5.CNhs10513.490-9F927.01
whole body, embryo E17.CNhs10517.475-3I524.73
whole body, embryo E18.CNhs10516.493-3B324.33
whole body, neonate N00.CNhs10525.657-19C233.31
whole body, neonate N01.CNhs10576.659-23C632.14
whole body, neonate N06.CNhs10515.692-21D124.04
whole body, neonate N10.CNhs10518.761-6B421.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell6.64e-0739
electrically active cell6.64e-0739

Uber anatomy
Ontology termp-valuen
embryo7.31e-08320
structure with developmental contribution from neural crest8.66e-0892
ectoderm-derived structure5.56e-0795
ectoderm5.56e-0795
presumptive ectoderm5.56e-0795
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:72510208..72510219,%2B&oldid=4287699"