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FFCP PHASE1:Mm9::chr2:32462499..32462577,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=50935
|EntrezGene=50935
|HGNC=
|HGNC=
|MCL_coexpression_id=1420
|TSSclassifier=NA
|UniProt=Q9JM95
|UniProt=Q9JM95
|association_with_transcript=0bp_to_ENSMUST00000095044,ENSMUST00000113289,ENSMUST00000126636,ENSMUST00000145782,ENSMUST00000146504_5end
|association_with_transcript=0bp_to_ENSMUST00000095044,ENSMUST00000113289,ENSMUST00000126636,ENSMUST00000145782,ENSMUST00000146504_5end
|cluster_id=chr2:32462499..32462577,+
|description=CAGE_peak_1_at_St6galnac6_5end
|description=CAGE_peak_1_at_St6galnac6_5end
|id=chr2:32462499..32462577,+
|id=chr2:32462499..32462577,+
|ontology_enrichment_celltype=CL:0000055!5.45e-09!50;CL:0002319!4.51e-07!43
|ontology_enrichment_celltype=CL:0000055!5.45e-09!50;CL:0002319!4.51e-07!43
|ontology_enrichment_celltype_v019_2=CL:0002319,4.46e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.44e-17!73;UBERON:0005743!1.44e-17!73;UBERON:0000073!2.93e-17!75;UBERON:0001016!2.93e-17!75;UBERON:0000955!5.77e-14!50;UBERON:0006238!5.77e-14!50;UBERON:0001049!1.76e-13!52;UBERON:0005068!1.76e-13!52;UBERON:0006241!1.76e-13!52;UBERON:0007135!1.76e-13!52;UBERON:0002616!1.83e-13!49;UBERON:0002346!2.81e-11!71;UBERON:0003075!2.81e-11!71;UBERON:0007284!2.81e-11!71;UBERON:0004121!1.57e-10!102;UBERON:0000924!1.57e-10!102;UBERON:0006601!1.57e-10!102;UBERON:0002020!2.62e-10!34;UBERON:0000025!3.69e-10!114;UBERON:0000033!8.63e-10!63;UBERON:0002791!3.41e-09!29;UBERON:0003528!3.41e-09!29;UBERON:0001893!3.41e-09!29;UBERON:0003080!7.56e-09!40;UBERON:0004111!2.28e-08!122;UBERON:0002780!2.44e-08!39;UBERON:0001890!2.44e-08!39;UBERON:0006240!2.44e-08!39;UBERON:0002021!2.34e-07!10;UBERON:0000411!2.34e-07!10;UBERON:0001950!2.34e-07!10;UBERON:0003056!4.38e-07!49
|ontology_enrichment_uberon=UBERON:0001017!1.44e-17!73;UBERON:0005743!1.44e-17!73;UBERON:0000073!2.93e-17!75;UBERON:0001016!2.93e-17!75;UBERON:0000955!5.77e-14!50;UBERON:0006238!5.77e-14!50;UBERON:0001049!1.76e-13!52;UBERON:0005068!1.76e-13!52;UBERON:0006241!1.76e-13!52;UBERON:0007135!1.76e-13!52;UBERON:0002616!1.83e-13!49;UBERON:0002346!2.81e-11!71;UBERON:0003075!2.81e-11!71;UBERON:0007284!2.81e-11!71;UBERON:0004121!1.57e-10!102;UBERON:0000924!1.57e-10!102;UBERON:0006601!1.57e-10!102;UBERON:0002020!2.62e-10!34;UBERON:0000025!3.69e-10!114;UBERON:0000033!8.63e-10!63;UBERON:0002791!3.41e-09!29;UBERON:0003528!3.41e-09!29;UBERON:0001893!3.41e-09!29;UBERON:0003080!7.56e-09!40;UBERON:0004111!2.28e-08!122;UBERON:0002780!2.44e-08!39;UBERON:0001890!2.44e-08!39;UBERON:0006240!2.44e-08!39;UBERON:0002021!2.34e-07!10;UBERON:0000411!2.34e-07!10;UBERON:0001950!2.34e-07!10;UBERON:0003056!4.38e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.40e-17,73;UBERON:0001016,2.85e-17,75;UBERON:0000073,1.01e-14,54;UBERON:0010314,1.15e-13,92;UBERON:0001049,1.72e-13,52;UBERON:0005068,1.72e-13,52;UBERON:0006241,1.72e-13,52;UBERON:0007135,1.72e-13,52;UBERON:0000955,2.80e-12,47;UBERON:0006238,2.80e-12,47;UBERON:0002616,8.54e-12,46;UBERON:0002346,1.54e-11,64;UBERON:0003075,1.54e-11,64;UBERON:0007284,1.54e-11,64;UBERON:0004121,1.67e-10,95;UBERON:0000924,1.67e-10,95;UBERON:0006601,1.67e-10,95;UBERON:0002020,2.58e-10,34;UBERON:0000025,3.39e-10,114;UBERON:0003528,3.37e-09,29;UBERON:0002791,3.37e-09,29;UBERON:0001893,3.37e-09,29;UBERON:0003080,7.46e-09,40;UBERON:0004111,2.12e-08,122;UBERON:0002780,2.41e-08,39;UBERON:0001890,2.41e-08,39;UBERON:0006240,2.41e-08,39;UBERON:0010371,6.19e-08,73;UBERON:0002021,2.31e-07,10;UBERON:0000411,2.31e-07,10;UBERON:0001950,2.31e-07,10;UBERON:0003056,4.33e-07,49
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198,10.3059129822345,9.04118764344118,9.79945527846513,8.9191501370773,7.94246747548096,6.50127935439407,7.48910774560619,4.89651010638371,1.58005560314089,4.86540516696394,3.90301637226344,1.42912905275575,4.65469408735452,2.98022032171897,1.56254084375959,2.21534290761866,1.51449674922221,1.21930890648,1.71404514732629,1.46186821109629,1.25075394132428,1.28564592399726,5.21479882314986,10.433339808581,9.06109951755704,5.87596157274275,14.4892195524143,9.94717119891265,9.52388446189778,4.07299920250225,5.01572104035363,36.7088697701093,38.2069946300957,45.2587455617123,48.2907442385762,40.4198686664679,41.5466643564335,42.5264175146038,34.674732648265,36.7045351277206,38.8320233813865,6.84996494055566,5.1873233542134,8.53668028770671,9.96737539980005,7.33646069197938,16.3620722520513,10.6678429344775,11.1258930909003,10.5903339165299,10.3605856823157,11.660047794951,9.61994341068989,10.6751318515666,11.2044016708521,11.8891420738119,10.0021675169445,13.0949288317687,9.83837024364896,7.82963211526283,9.42073088860143,10.6289468239479,11.0034999818789,9.53744759789284,5.66851024866081,9.69326618277905,10.0691383391095,11.5244622909847,8.94437018888666,12.6297825876651,10.1005608898393,13.1684870117833,12.8055827088233,9.82154503607254,11.7751999301334,12.7318363247553,13.2399606307111,10.292990771598,7.73535794573874,12.242453252406,13.8972594045295,12.5208631235028
|phase1_expression=5.12476310735341,0.348975407639361,0.454999239389536,0,0,0.839396359559449,0,0.387369970324729,0,0.234064526321993,0.171217968225505,0.239316476986009,0,0.0874204024189974,4.66353666541928,4.85940641735582,4.89693314689703,0.788655413395594,1.23402990245165,1.27316895539409,14.4573593256819,16.1844250457443,10.9703911438353,0.799962113967033,1.37645568640302,0,0.86152399231815,0.430942465371778,0.380046838912748,0,0.665191531965914,16.5107975099504,14.7615549020297,15.8481681015439,0,0.166234645358492,0,0.418531630736908,2.3440060335714,0.523523743973798,0.588231488031014,0.683045484958446,0.971020706062307,11.7084040717287,16.3216859263418,14.6837401729345,55.5497854487108,25.9449936092731,26.3623419281366,21.7761486963197,18.8981669194239,14.3752564364972,0.838913030288682,0,0,31.9001700684574,26.9341433542431,33.5186859980338,10.1158230429799,7.93486468908049,9.50747105259269,21.6860500524245,28.4574334755565,25.1971920838792,17.7995945262055,19.1829631035447,38.3488141463558,43.4166685013357,7.8804105354443,6.34527910158946,10.0955981448663,25.7085885963423,21.6451170132581,4.5321595709533,3.92966431174769,6.43453150627015,34.1359231098105,41.498384877686,45.1603207773356,13.1886287730194,11.8933936683133,9.89735404057844,53.3239528092638,43.895483582471,38.3523601919793,13.8475435172624,13.5253096759148,7.45597783301202,3.55913108665965,14.2074533000757,6.08715426273523,7.74381489283248,4.75979933595425,11.873470216032,9.09686984426737,7.16843019355737,9.83110940922263,25.0532574189745,34.5515386121815,39.2206927706478,3.38024207464033,30.7983545794363,53.5091003383956,113.770672504533,0.432982082022428,0,0,5.93756174539112,3.10725460376606,16.0317510190011,5.37804512975021,5.78484408793068,8.76338889573022,7.988299949289,7.76085467095652,14.2003248202533,2.22475470960936,10.7003524120735,7.07688441559899,14.5590164952668,12.367125033782,14.5462575940567,9.31958806090611,26.9358333250623,40.4232144149968,3.0654846625031,5.63131085177825,8.99854096490112,4.95573885584952,40.4434726393021,33.8550446085784,14.827213549318,45.7157962105687,40.4030422581922,41.557608911912,35.6930778749067,13.5446353920921,11.8186622079588,4.0435641349388,3.99839526184301,4.42409506073193,4.59804208866946,7.74267158163002,8.28876498096433,5.64702942956021,6.27757229395764,10.8694000489285,15.0047955028629,5.82033580918674,7.94245536704841,6.862093842394,11.836569551089,9.17555922444473,11.1440693287093,12.7584924572925,10.7478504081986,7.72434506044558,8.74982884190032,11.3665399758237,13.4631752148076,8.44293815931946,10.4435995647389,9.94327889457883,11.215561209602,8.79322543458056,9.53389173476672,10.4626626545851,9.45799273174073,10.0381508447223,11.1633875573785,14.6734545277999,12.8655988934292,11.6361561104257,15.4337381574428,43.3197294042102,10.0846520131699,0,1.32225283331772,7.25180051819795,8.12828351511535,5.7990357594942,5.44545516483025,4.89231696458715,5.32631753115166,4.2707615539006,3.45867804920423,2.26201687920243,5.17286827306992,4.67913809085888,2.69645822596266,3.02593269824572,4.18196673834171,5.50036912763937,6.85491075658373,5.63538678365402,3.86937522906097,7.37019451236978,5.6810014111158,3.03535378196435,3.39503340353085,3.1399745568275,3.94870924549762,8.30067355844017,5.83957870006329,7.86235980452812,2.47348323623339,4.66578279193557,3.13530307678142,3.8193877767213,3.45235364940973,1.62135226775035,1.92192989231657,0,3.72140947668503,3.74445207737473,6.31447194867779,6.27890947326693,8.68398338454061,7.57488079683079,7.20067364727842,8.63714375142737,9.50572480341054,5.86725620721255,7.03526281255626,10.9500074807566,6.43941037930736,4.25614889086716,5.75808193086815,11.799652880654,7.53771247692395,8.63424909329478,9.83613598354279,25.6345182696763,16.86107619838,2.95058563811422,3.03530420935206,36.6055345172166,30.006191767604,15.0820149746541,21.4600288123717,9.4652465824877,10.1514073517126,10.5557464889071,9.31978312014953,9.35754431146055,7.64306633129848,11.7395103485719,12.5670018901864,10.6727700045561,32.7747742750243,11.639086987078,16.5601011410547,9.93610452056814,11.8778488540226,2.65490276679926,5.09839335925461,4.23252979750651,4.14931175462976,7.97315110778086,6.7635732547664,7.23599220871019,7.27067458955011,6.41695281092498,5.05658812697306,4.21674434299995,5.15677716240934,7.83011093233712,6.66226047915848,6.20921682157222,6.64444808597936,6.38424841112185,8.20496560969525,8.88564711251453,9.13394847343798,3.52007562095566,1.90648863777438,2.8668691747145,5.44124634706884,5.16686165426898,4.94565984410878,4.77489376012546,3.61109979439135,2.62332752966866,28.9263471136395,5.98048082792484,11.3512777379772,7.22258656741876,6.40452753815949,4.10082683163076,7.32090154260872,5.43930975980337,4.75834937900437,6.35719879500349,4.77335309007557,7.59206384594725,7.5228202836934,6.80433647177348,6.27264888043406,4.58561383866973,6.20375993370175,7.43881101528023,5.23511883968059,6.48074866458964,3.10669656543463,6.76431526421028,7.92437694033088,8.43838301331198,10.3059129822345,9.04118764344118,9.79945527846513,8.9191501370773,7.94246747548096,6.50127935439407,7.48910774560619,4.89651010638371,1.58005560314089,4.86540516696394,3.90301637226344,1.42912905275575,4.65469408735452,2.98022032171897,1.56254084375959,2.21534290761866,1.51449674922221,1.21930890648,1.71404514732629,1.46186821109629,1.25075394132428,1.28564592399726,5.21479882314986,10.433339808581,9.06109951755704,5.87596157274275,14.4892195524143,9.94717119891265,9.52388446189778,4.07299920250225,5.01572104035363,36.7088697701093,38.2069946300957,45.2587455617123,48.2907442385762,40.4198686664679,41.5466643564335,42.5264175146038,34.674732648265,36.7045351277206,38.8320233813865,6.84996494055566,5.1873233542134,8.53668028770671,9.96737539980005,7.33646069197938,16.3620722520513,10.6678429344775,11.1258930909003,10.5903339165299,10.3605856823157,11.660047794951,9.61994341068989,10.6751318515666,11.2044016708521,11.8891420738119,10.0021675169445,13.0949288317687,9.83837024364896,7.82963211526283,9.42073088860143,10.6289468239479,11.0034999818789,9.53744759789284,5.66851024866081,9.69326618277905,10.0691383391095,11.5244622909847,8.94437018888666,12.6297825876651,10.1005608898393,13.1684870117833,12.8055827088233,9.82154503607254,11.7751999301334,12.7318363247553,13.2399606307111,10.292990771598,7.73535794573874,12.242453252406,13.8972594045295,12.5208631235028
|short_description=p1@St6galnac6
|short_description=p1@St6galnac6
}}
}}

Latest revision as of 14:29, 26 September 2015

Short description:p1@St6galnac6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_St6galnac6_5end
Coexpression cluster:MCL_coexpression_mm9:1420
Association with transcript: 0bp_to_ENSMUST00000095044, ENSMUST00000113289, ENSMUST00000126636, ENSMUST00000145782, ENSMUST00000146504_5end
EntrezGene:St6galnac6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@St6galnac6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.86
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H216.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I910.97
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I316.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G614.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.71
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D916.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B314.68
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B755.55
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C225.94
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B826.36
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C418.90
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C131.90
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E126.93
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C533.52
Mouse Granule cells, donor1.CNhs12131.11713-123C310.12
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C621.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D128.46
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C725.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E717.80
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D219.18
Mouse Microglia, donor1.CNhs12629.11718-123C838.35
Mouse Microglia, donor2.CNhs12634.11736-123E843.42
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.88
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F125.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D334.14
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F341.50
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D745.16
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.89
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E453.32
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E543.90
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I638.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.85
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D93.56
Mouse Schwann, donor2.CNhs12573.11746-123F914.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.09
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C811.87
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.17
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I725.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E334.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I839.22
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H130.80
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I853.51
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6113.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.94
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D716.03
adrenal gland, embryo E14.CNhs11038.406-44C55.38
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I18.76
adrenal gland, embryo E18.CNhs11026.1262-18F57.99
adrenal gland, neonate N00.CNhs11191.1311-23C17.76
adrenal gland, neonate N25.CNhs11223.1377-27I314.20
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H110.70
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F514.56
bone (os femoris), neonate N16.CNhs11225.1525-43A612.37
bone (os femoris), neonate N20.CNhs11195.1350-25C314.55
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B226.94
cerebellum, neonate N30.CNhs11135.1395-42I240.42
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.63
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.96
corpora quadrigemina, adult.CNhs10501.16-22A440.44
corpus striatum, adult.CNhs10487.19-21D833.86
corpus striatum, neonate N00.CNhs11226.630-43F114.83
cortex, adult.CNhs10473.12-14D545.72
cortex, neonate N30.CNhs11107.1392-42F240.40
diencephalon, adult.CNhs10482.20-12F241.56
diencephalon, neonate N30.CNhs11201.1388-42B235.69
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.54
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.82
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C64.42
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C97.74
eyeball, embryo E17.CNhs11023.1261-18D48.29
eyeball, neonate N00.CNhs11207.633-15C65.65
eyeball, neonate N01.CNhs11140.1532-43E76.28
eyeball, neonate N02.CNhs11205.1551-44G810.87
eyeball, neonate N16.CNhs11188.777-19A215.00
forelimb, embryo E11.CNhs10596.335-25E25.82
forelimb, embryo E12.CNhs10600.359-14H27.94
forelimb, embryo E13.CNhs10589.384-1E26.86
forelimb, embryo E14.CNhs10577.413-26A811.84
forelimb, embryo E15.CNhs11007.437-20E79.18
forelimb, embryo E17.CNhs10598.1517-43C411.14
forelimb, embryo E18.CNhs11008.1520-43B512.76
gonad, embryo E13.CNhs11044.1564-45I610.75
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.72
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.75
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.37
heart, embryo E11.CNhs10586.331-24E913.46
heart, embryo E12.CNhs11015.353-12F58.44
heart, embryo E13.CNhs11013.376-3I910.44
heart, embryo E14.CNhs10597.403-26D49.94
heart, embryo E15.CNhs11017.431-16C811.22
heart, embryo E16.CNhs11021.457-17C68.79
heart, embryo E17.CNhs11025.479-18E59.53
heart, embryo E18.CNhs11030.1283-20G310.46
heart, neonate N00.CNhs11213.639-21E39.46
heart, neonate N03.CNhs11221.1349-25I210.04
heart, neonate N10.CNhs11118.749-24G111.16
heart, neonate N16.CNhs11209.782-15G114.67
heart, neonate N20.CNhs11127.821-26I612.87
heart, neonate N25.CNhs11196.1351-25D311.64
heart, neonate N30.CNhs11202.1390-42D215.43
hippocampus, adult.CNhs10478.13-16E843.32
hippocampus, neonate N00.CNhs11228.627-43G110.08
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I57.25
intestine, embryo E13.CNhs11010.381-16D58.13
intestine, embryo E15.CNhs10602.976-16D85.80
intestine, embryo E16.CNhs10585.463-22H45.45
intestine, embryo E17.CNhs10582.482-18D34.89
intestine, embryo E18.CNhs10526.1289-20F75.33
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F25.17
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G14.18
kidney, embryo E14.CNhs10606.411-4I95.50
kidney, embryo E15.CNhs10997.434-16F86.85
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C77.37
kidney, neonate N00.CNhs11214.646-21G75.68
kidney, neonate N10.CNhs11206.758-6D53.04
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H13.95
liver, adult pregnant day01.CNhs10466.508-5B28.30
liver, embryo E12.CNhs10601.355-15F85.84
liver, embryo E13.CNhs10524.378-3H67.86
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D74.67
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A36.31
liver, neonate N25.CNhs11198.1368-26H16.28
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B17.57
lung, embryo E12.CNhs10522.354-16G27.20
lung, embryo E14.CNhs10604.404-26F88.64
lung, embryo E15.CNhs11020.432-17C59.51
lung, embryo E16.CNhs10998.458-17B65.87
lung, embryo E17.CNhs10605.480-44A67.04
lung, embryo E18.CNhs10583.1287-20I610.95
lung, neonate N00.CNhs11224.640-42C66.44
lung, neonate N06.CNhs11212.683-20E54.26
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E611.80
lung, neonate N20.CNhs11109.822-18A47.54
lung, neonate N25.CNhs11119.1359-25C78.63
lung, neonate N30.CNhs11133.1394-42H29.84
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A125.63
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A116.86
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C236.61
medulla oblongata, neonate N30.CNhs11200.1396-42A330.01
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C221.46
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.56
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.32
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.64
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.57
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.67
olfactory brain, adult.CNhs10489.18-22I932.77
ovary, adult.CNhs10507.91-2I711.64
ovary, embryo E18.CNhs11040.505-44H716.56
ovary, neonate N00.CNhs11217.1299-22I49.94
oviduct, adult pregnant day01.CNhs10500.988-6G611.88
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E54.15
pancreas, embryo E17.CNhs10599.1558-45G37.97
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G97.24
pancreas, neonate N01.CNhs11138.1531-43D77.27
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E66.66
pituitary gland, embryo E13.CNhs11009.370-44C76.21
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B96.38
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F58.89
pituitary gland, neonate N00.CNhs11190.1308-22E99.13
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C35.44
skin, neonate N00.CNhs11124.650-25G45.17
skin, neonate N03.CNhs11215.662-22H34.95
skin, neonate N06.CNhs11097.693-20I54.77
skin, neonate N10.CNhs11108.762-6C43.61
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C928.93
spleen, adult.CNhs10465.25-2G25.98
spleen, embryo E16.CNhs11035.461-43C111.35
spleen, embryo E18.CNhs11011.1271-21F27.22
spleen, neonate N10.CNhs11116.752-24D16.40
spleen, neonate N20.CNhs11112.824-19H14.10
spleen, neonate N25.CNhs11099.1354-25G37.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.36
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E37.59
stomach, embryo E15.CNhs10603.1252-16G87.52
stomach, embryo E16.CNhs11022.459-17D46.80
stomach, embryo E17.CNhs11006.1035-18D56.27
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B86.20
stomach, neonate N07.CNhs11210.718-18A97.44
stomach, neonate N25.CNhs11104.1355-25E45.24
stomach, neonate N30.CNhs11134.1386-42I16.48
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F57.92
testis, embryo E15.CNhs11034.443-27C58.44
testis, embryo E16.CNhs11033.470-26G510.31
testis, embryo E17.CNhs11029.486-18I59.04
testis, embryo E18.CNhs11027.503-18G59.80
testis, neonate N00.CNhs11189.1300-22B78.92
testis, neonate N07.CNhs11222.726-26I47.94
testis, neonate N10.CNhs11204.763-44D96.50
testis, neonate N20.CNhs11110.839-18H37.49
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I44.87
thymus, embryo E15.CNhs11005.430-45I23.90
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C14.65
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D31.22
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H310.43
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.88
urinary bladder, adult.CNhs10481.879-12E414.49
uterus, adult pregnant day19.CNhs10497.590-15F59.95
uterus, adult.CNhs10509.92-27E59.52
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A136.71
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A238.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A345.26
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D748.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A440.42
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A541.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A642.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A734.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A836.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A938.83
whole body, embryo E11.CNhs11014.324-5I86.85
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H28.54
whole body, embryo E14.5.CNhs10578.420-27D29.97
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F216.36
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.59
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.84
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.07
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.52
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.78
whole body, embryo E17.5.CNhs10513.490-9F912.73
whole body, embryo E17.CNhs10517.475-3I513.24
whole body, embryo E18.CNhs10516.493-3B310.29
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C612.24
whole body, neonate N06.CNhs10515.692-21D113.90
whole body, neonate N10.CNhs10518.761-6B412.52





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell4.46e-0743

Uber anatomy
Ontology termp-valuen
central nervous system1.40e-1773
nervous system2.85e-1775
regional part of nervous system1.01e-1454
structure with developmental contribution from neural crest1.15e-1392
neural tube1.72e-1352
neural rod1.72e-1352
future spinal cord1.72e-1352
neural keel1.72e-1352
brain2.80e-1247
future brain2.80e-1247
regional part of brain8.54e-1246
neurectoderm1.54e-1164
neural plate1.54e-1164
presumptive neural plate1.54e-1164
ectoderm-derived structure1.67e-1095
ectoderm1.67e-1095
presumptive ectoderm1.67e-1095
gray matter2.58e-1034
tube3.39e-10114
brain grey matter3.37e-0929
regional part of telencephalon3.37e-0929
telencephalon3.37e-0929
anterior neural tube7.46e-0940
anatomical conduit2.12e-08122
regional part of forebrain2.41e-0839
forebrain2.41e-0839
future forebrain2.41e-0839
ecto-epithelium6.19e-0873
occipital lobe2.31e-0710
visual cortex2.31e-0710
neocortex2.31e-0710
pre-chordal neural plate4.33e-0749
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