FFCP PHASE1:Mm9::chr2:37307751..37307806,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227800 | |EntrezGene=227800 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A2AWA9,A2AWB0 | |UniProt=A2AWA9,A2AWB0 | ||
|association_with_transcript=0bp_to_ENSMUST00000066055,ENSMUST00000112920,ENSMUST00000148470,NM_001033960,uc008jmy.1_5end | |association_with_transcript=0bp_to_ENSMUST00000066055,ENSMUST00000112920,ENSMUST00000148470,NM_001033960,uc008jmy.1_5end | ||
|cluster_id=chr2:37307751..37307806,+ | |||
|description=CAGE_peak_2_at_Rabgap1_5end | |description=CAGE_peak_2_at_Rabgap1_5end | ||
|id=chr2:37307751..37307806,+ | |id=chr2:37307751..37307806,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.90e-10!102;UBERON:0000924!3.90e-10!102;UBERON:0006601!3.90e-10!102;UBERON:0000468!1.58e-08!333;UBERON:0003056!4.61e-08!49;UBERON:0000033!2.53e-07!63;UBERON:0000153!3.93e-07!94;UBERON:0002346!6.78e-07!71;UBERON:0003075!6.78e-07!71;UBERON:0007284!6.78e-07!71 | |ontology_enrichment_uberon=UBERON:0004121!3.90e-10!102;UBERON:0000924!3.90e-10!102;UBERON:0006601!3.90e-10!102;UBERON:0000468!1.58e-08!333;UBERON:0003056!4.61e-08!49;UBERON:0000033!2.53e-07!63;UBERON:0000153!3.93e-07!94;UBERON:0002346!6.78e-07!71;UBERON:0003075!6.78e-07!71;UBERON:0007284!6.78e-07!71 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.07e-11,95;UBERON:0000924,8.07e-11,95;UBERON:0006601,8.07e-11,95;UBERON:0010371,1.33e-09,73;UBERON:0003056,4.61e-08,49;UBERON:0002346,1.30e-07,64;UBERON:0003075,1.30e-07,64;UBERON:0007284,1.30e-07,64;UBERON:0010314,2.11e-07,92 | |||
|phase1_expression=9.76907967339243,4.53668029931169,4.09499315450582,8.77146212789807,4.50806156951712,5.54001597309236,5.84031601488814,10.2007425518845,15.3459707145317,22.7042590532334,9.93064215707929,11.1681022593471,10.4432445258036,12.4136971434976,4.99664642723494,4.656931149966,4.19737126876888,7.72882305127682,7.67840828192137,4.2438965179803,13.6919697143222,6.15603897445489,6.79119451761232,4.63978026100879,2.52350209173887,1.14846392823004,2.58457197695445,1.50829862880122,4.94060890586572,3.2763916868791,2.43903561720835,4.44521471421742,3.07532393792285,0,6.35473563452804,4.82080471539628,5.71674197534634,9.20769587621197,7.0320181007142,6.80580867165938,10.5881667845583,8.19654581950135,5.82612423637384,7.30201544258348,9.52943153463437,11.1963518818626,2.34717403304412,3.05235218932625,2.63623419281366,6.02732687130279,2.37976916763116,1.43752564364972,6.87908684836719,10.1550699881588,10.4189077734164,5.91696702882678,8.02293631828519,4.64104883049698,13.1505699558739,12.6957835025288,11.4089652631112,2.71075625655306,1.77858959222228,1.3498495759221,3.9554654502679,2.1314403448383,0.898800331555214,2.30530983192933,22.3969562586312,17.5507719831198,16.4053469854078,5.71301968807607,4.63823935998388,15.923803897944,18.2106394934649,11.0306254393203,8.8092704799511,11.1087984134113,11.0596703944495,10.2871304429551,15.4614117688072,19.2737947106001,7.53794097303729,9.56696437053856,13.5990440521361,8.83885756421003,11.3897344639282,18.8263440283554,15.2966910533032,18.8173184665896,19.4209207430124,4.30211938490693,1.3599426674155,2.15881276655127,3.89865850468601,3.58421509677868,8.56710962803686,4.60161870960756,5.19572009205738,3.18005617059306,9.99988280414432,8.98285341900225,0,0,4.76280290224671,3.54703811665138,3.53867111510348,8.67797485864856,13.4647699496529,14.2504453502232,7.28638372417771,8.22056791442781,8.07154240396205,7.53613202763113,13.7578787348775,10.053327306374,11.8653584512499,10.9895511259133,4.42305275974937,9.86777784679196,6.18356251689102,8.727754556434,9.31958806090611,11.7112318804619,20.9446706813455,6.64188343542338,4.67278985573089,2.99951365496704,3.04968544975355,12.8819949888148,12.3525162761029,26.2617595915887,18.7730265807659,17.3886510984625,11.6361304953354,16.061885043708,10.9986512958342,8.8328949133166,11.3725241295154,10.9429765060966,11.7108398666433,11.7250073261071,16.3856538122868,14.3169576943929,17.5534167810426,14.7330778327577,15.554486276915,12.9351685369508,13.7963515477019,17.2086532952716,18.4748680372146,12.0557652835166,13.9023624612799,23.3328951569852,14.1989674121481,11.5439874754726,2.80885274925294,3.3455227924913,3.6941254921427,10.7705401718461,7.27030785941398,10.9837857491219,16.8088762265499,11.8058539048442,12.0328348052155,10.9290954032692,12.3405764643825,13.077718345123,13.1647879930784,14.1184019108022,14.592385718254,14.0351987928319,11.6361561104257,9.66286215074677,19.3466752678997,22.433205498684,7.59963200862735,5.28901133327089,10.6644125267617,12.0763069367428,12.7578786708872,10.6892268050372,12.008414367623,11.223311940641,8.54152310780121,7.5761519173045,11.5614196048124,6.96347652144028,10.1381325301942,6.29173586057955,7.5648317456143,7.96565093017469,7.39704813717019,11.6533482861923,11.270773567308,11.8117770150282,10.6673867942194,14.2375714377347,14.1017477787094,9.15182917473533,10.3619160375307,8.88459580236964,5.92905254174298,4.83850806576673,5.50365186316968,5.62155280962134,4.86864291332407,5.54707467430559,3.8193877767213,4.60313819921297,8.10676133875177,4.94210543738547,1.43768206527355,5.95425516269605,4.99260276983297,5.30415643688935,4.66433275156972,3.85954817090694,11.6394509804961,10.0430448238357,14.6668478797823,11.0334305753872,12.4385831592906,17.253144516507,13.8065311713888,19.1230974900643,12.2955412402829,18.6030339304971,15.6265673284337,12.2897486036803,11.569893785015,13.4523624480806,12.0633027151418,5.98296252200581,6.39293554924747,15.1765210467603,9.9541365792431,15.9407893765396,7.04920265119704,15.1482556322624,12.9358369960665,18.7410597262386,12.9254038639679,16.9667846546312,18.0466926006739,15.0030561318081,15.7876173653209,14.9050487534769,14.6256477840214,16.3873871375122,13.200427924369,8.19101776869374,16.4515828947112,13.3625799607754,10.619611067197,8.49732226542435,6.95344181018927,6.60117779145643,6.20133975049623,10.7602301780375,12.1461297789064,10.1789444253702,11.4079161083111,9.16506598013866,4.21674434299995,9.28219889233682,8.17055053809091,12.6042765821917,8.66703181344455,11.7885369267376,15.9606210278046,15.161349496176,14.1512157717824,9.43841342255258,9.85621173867584,10.8034356140548,9.92377791247329,20.281009111802,34.5533873129238,25.2108026199691,23.635724112621,20.3534715683876,11.9507143018239,11.8672193286726,5.80960994712699,7.84270098260245,8.33375373163703,3.95573759709851,5.33107488111998,5.49067615695654,5.77926661979108,6.9975726161829,5.38979897837253,4.77335309007557,11.704431762502,13.6224042974989,12.3126088536853,13.17256264891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| |phase1_expression=9.76907967339243,4.53668029931169,4.09499315450582,8.77146212789807,4.50806156951712,5.54001597309236,5.84031601488814,10.2007425518845,15.3459707145317,22.7042590532334,9.93064215707929,11.1681022593471,10.4432445258036,12.4136971434976,4.99664642723494,4.656931149966,4.19737126876888,7.72882305127682,7.67840828192137,4.2438965179803,13.6919697143222,6.15603897445489,6.79119451761232,4.63978026100879,2.52350209173887,1.14846392823004,2.58457197695445,1.50829862880122,4.94060890586572,3.2763916868791,2.43903561720835,4.44521471421742,3.07532393792285,0,6.35473563452804,4.82080471539628,5.71674197534634,9.20769587621197,7.0320181007142,6.80580867165938,10.5881667845583,8.19654581950135,5.82612423637384,7.30201544258348,9.52943153463437,11.1963518818626,2.34717403304412,3.05235218932625,2.63623419281366,6.02732687130279,2.37976916763116,1.43752564364972,6.87908684836719,10.1550699881588,10.4189077734164,5.91696702882678,8.02293631828519,4.64104883049698,13.1505699558739,12.6957835025288,11.4089652631112,2.71075625655306,1.77858959222228,1.3498495759221,3.9554654502679,2.1314403448383,0.898800331555214,2.30530983192933,22.3969562586312,17.5507719831198,16.4053469854078,5.71301968807607,4.63823935998388,15.923803897944,18.2106394934649,11.0306254393203,8.8092704799511,11.1087984134113,11.0596703944495,10.2871304429551,15.4614117688072,19.2737947106001,7.53794097303729,9.56696437053856,13.5990440521361,8.83885756421003,11.3897344639282,18.8263440283554,15.2966910533032,18.8173184665896,19.4209207430124,4.30211938490693,1.3599426674155,2.15881276655127,3.89865850468601,3.58421509677868,8.56710962803686,4.60161870960756,5.19572009205738,3.18005617059306,9.99988280414432,8.98285341900225,0,0,4.76280290224671,3.54703811665138,3.53867111510348,8.67797485864856,13.4647699496529,14.2504453502232,7.28638372417771,8.22056791442781,8.07154240396205,7.53613202763113,13.7578787348775,10.053327306374,11.8653584512499,10.9895511259133,4.42305275974937,9.86777784679196,6.18356251689102,8.727754556434,9.31958806090611,11.7112318804619,20.9446706813455,6.64188343542338,4.67278985573089,2.99951365496704,3.04968544975355,12.8819949888148,12.3525162761029,26.2617595915887,18.7730265807659,17.3886510984625,11.6361304953354,16.061885043708,10.9986512958342,8.8328949133166,11.3725241295154,10.9429765060966,11.7108398666433,11.7250073261071,16.3856538122868,14.3169576943929,17.5534167810426,14.7330778327577,15.554486276915,12.9351685369508,13.7963515477019,17.2086532952716,18.4748680372146,12.0557652835166,13.9023624612799,23.3328951569852,14.1989674121481,11.5439874754726,2.80885274925294,3.3455227924913,3.6941254921427,10.7705401718461,7.27030785941398,10.9837857491219,16.8088762265499,11.8058539048442,12.0328348052155,10.9290954032692,12.3405764643825,13.077718345123,13.1647879930784,14.1184019108022,14.592385718254,14.0351987928319,11.6361561104257,9.66286215074677,19.3466752678997,22.433205498684,7.59963200862735,5.28901133327089,10.6644125267617,12.0763069367428,12.7578786708872,10.6892268050372,12.008414367623,11.223311940641,8.54152310780121,7.5761519173045,11.5614196048124,6.96347652144028,10.1381325301942,6.29173586057955,7.5648317456143,7.96565093017469,7.39704813717019,11.6533482861923,11.270773567308,11.8117770150282,10.6673867942194,14.2375714377347,14.1017477787094,9.15182917473533,10.3619160375307,8.88459580236964,5.92905254174298,4.83850806576673,5.50365186316968,5.62155280962134,4.86864291332407,5.54707467430559,3.8193877767213,4.60313819921297,8.10676133875177,4.94210543738547,1.43768206527355,5.95425516269605,4.99260276983297,5.30415643688935,4.66433275156972,3.85954817090694,11.6394509804961,10.0430448238357,14.6668478797823,11.0334305753872,12.4385831592906,17.253144516507,13.8065311713888,19.1230974900643,12.2955412402829,18.6030339304971,15.6265673284337,12.2897486036803,11.569893785015,13.4523624480806,12.0633027151418,5.98296252200581,6.39293554924747,15.1765210467603,9.9541365792431,15.9407893765396,7.04920265119704,15.1482556322624,12.9358369960665,18.7410597262386,12.9254038639679,16.9667846546312,18.0466926006739,15.0030561318081,15.7876173653209,14.9050487534769,14.6256477840214,16.3873871375122,13.200427924369,8.19101776869374,16.4515828947112,13.3625799607754,10.619611067197,8.49732226542435,6.95344181018927,6.60117779145643,6.20133975049623,10.7602301780375,12.1461297789064,10.1789444253702,11.4079161083111,9.16506598013866,4.21674434299995,9.28219889233682,8.17055053809091,12.6042765821917,8.66703181344455,11.7885369267376,15.9606210278046,15.161349496176,14.1512157717824,9.43841342255258,9.85621173867584,10.8034356140548,9.92377791247329,20.281009111802,34.5533873129238,25.2108026199691,23.635724112621,20.3534715683876,11.9507143018239,11.8672193286726,5.80960994712699,7.84270098260245,8.33375373163703,3.95573759709851,5.33107488111998,5.49067615695654,5.77926661979108,6.9975726161829,5.38979897837253,4.77335309007557,11.704431762502,13.6224042974989,12.3126088536853,13.17256264891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| ||
|short_description=p2@Rabgap1 | |short_description=p2@Rabgap1 | ||
}} | }} |
Latest revision as of 16:25, 26 September 2015
Short description: | p2@Rabgap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rabgap1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000066055, ENSMUST00000112920, ENSMUST00000148470, NM_001033960, uc008jmy.1_5end |
EntrezGene: | Rabgap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 8.07e-11 | 95 |
ectoderm | 8.07e-11 | 95 |
presumptive ectoderm | 8.07e-11 | 95 |
ecto-epithelium | 1.33e-09 | 73 |
pre-chordal neural plate | 4.61e-08 | 49 |
neurectoderm | 1.30e-07 | 64 |
neural plate | 1.30e-07 | 64 |
presumptive neural plate | 1.30e-07 | 64 |
structure with developmental contribution from neural crest | 2.11e-07 | 92 |