FFCP PHASE1:Mm9::chr4:133574744..133574751,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=83557 | |EntrezGene=83557 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=97 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K3Y3 | |UniProt=Q8K3Y3 | ||
|association_with_transcript=4bp_to_ENSMUST00000051674_5end | |association_with_transcript=4bp_to_ENSMUST00000051674_5end | ||
|cluster_id=chr4:133574744..133574751,- | |||
|description=CAGE_peak_3_at_Lin28a_5end | |description=CAGE_peak_3_at_Lin28a_5end | ||
|id=chr4:133574744..133574751,- | |id=chr4:133574744..133574751,- | ||
|ontology_enrichment_celltype=CL:0000349!4.53e-15!3;CL:0000351!4.53e-15!3 | |ontology_enrichment_celltype=CL:0000349!4.53e-15!3;CL:0000351!4.53e-15!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.65e-52,3;CL:0000351,1.65e-52,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!6.22e-25!14;UBERON:0000991!9.73e-24!18;UBERON:0005564!9.73e-24!18;UBERON:0003135!3.44e-23!15;UBERON:0003101!1.15e-21!16;UBERON:0000079!1.15e-21!16;UBERON:0003133!4.52e-21!24;UBERON:0004176!2.55e-20!17;UBERON:0009196!2.55e-20!17;UBERON:0009117!2.55e-20!17;UBERON:0005156!2.54e-19!26;UBERON:0000990!2.54e-19!26;UBERON:0000358!4.53e-15!3;UBERON:0000307!4.53e-15!3;UBERON:0002323!8.85e-11!37;UBERON:0004458!8.85e-11!37;UBERON:0003886!1.87e-10!38;UBERON:0002553!3.79e-10!39 | |ontology_enrichment_uberon=UBERON:0000473!6.22e-25!14;UBERON:0000991!9.73e-24!18;UBERON:0005564!9.73e-24!18;UBERON:0003135!3.44e-23!15;UBERON:0003101!1.15e-21!16;UBERON:0000079!1.15e-21!16;UBERON:0003133!4.52e-21!24;UBERON:0004176!2.55e-20!17;UBERON:0009196!2.55e-20!17;UBERON:0009117!2.55e-20!17;UBERON:0005156!2.54e-19!26;UBERON:0000990!2.54e-19!26;UBERON:0000358!4.53e-15!3;UBERON:0000307!4.53e-15!3;UBERON:0002323!8.85e-11!37;UBERON:0004458!8.85e-11!37;UBERON:0003886!1.87e-10!38;UBERON:0002553!3.79e-10!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.65e-52,3;UBERON:0000307,1.65e-52,3;UBERON:0007010,1.65e-52,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0.299033092087958,0.827292452285488,0.388902376688095,0,0,0.117357238645754,0.781226309063701,2.83120229949419,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21985953374065,2.51198798506532,1.84673078000486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0.299033092087958,0.827292452285488,0.388902376688095,0,0,0.117357238645754,0.781226309063701,2.83120229949419,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21985953374065,2.51198798506532,1.84673078000486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@Lin28a | |short_description=p3@Lin28a | ||
}} | }} |
Latest revision as of 11:53, 26 September 2015
Short description: | p3@Lin28a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lin28a_5end |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | 4bp_to_ENSMUST00000051674_5end |
EntrezGene: | Lin28a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.65e-52 | 3 |
trophoblast cell | 1.65e-52 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.65e-52 | 3 |
blastula | 1.65e-52 | 3 |
cleaving embryo | 1.65e-52 | 3 |