FFCP PHASE1:Hg19::chr13:30415684..30415696,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:30415684..30415696,- | |||
|coexpression_cluster_id=C393 | |||
|description=CAGE_peak_at_chr13:30415684..30415696,- | |description=CAGE_peak_at_chr13:30415684..30415696,- | ||
|id=chr13:30415684..30415696,- | |id=chr13:30415684..30415696,- | ||
|ontology_enrichment_celltype=CL:0000039!4.89e-15!7;CL:0000586!4.89e-15!7;CL:0002541!1.57e-09!3;CL:0002563!2.84e-07!4 | |ontology_enrichment_celltype=CL:0000039!4.89e-15!7;CL:0000586!4.89e-15!7;CL:0002541!1.57e-09!3;CL:0002563!2.84e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002097;5.56e-26;2!CL:0000174;8.00e-18;3!CL:0002537;2.66e-11;5!CL:0000150;7.91e-07;9!CL:0000163;7.91e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,5.56e-26,2;CL:0000174,8.00e-18,3;CL:0002537,2.66e-11,5;CL:0000150,7.91e-07,9;CL:0000163,7.91e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.40e-08;29 | |||
|ontology_enrichment_disease=DOID:305!6.77e-11!106;DOID:0050687!8.73e-10!143;DOID:178!1.26e-07!1;DOID:326!1.26e-07!1;DOID:3978!1.26e-07!1;DOID:3394!1.26e-07!1;DOID:5844!1.26e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:170;1.32e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:170,1.32e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.58e-46!9;UBERON:0001557!1.86e-21!19;UBERON:0005631!2.27e-11!14;UBERON:0000158!2.27e-11!14;UBERON:0008947!3.85e-10!38;UBERON:0003258!3.85e-10!38;UBERON:0000476!1.57e-09!3;UBERON:0000920!1.57e-09!3;UBERON:0003124!1.10e-08!7;UBERON:0000072!3.58e-08!46;UBERON:0002146!1.11e-07!1;UBERON:0005623!1.11e-07!1;UBERON:0001242!2.84e-07!4;UBERON:0001262!2.84e-07!4;UBERON:0004786!2.84e-07!4;UBERON:0004808!2.84e-07!4;UBERON:0001277!2.84e-07!4;UBERON:0000065!6.13e-07!53;UBERON:0000064!6.50e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.17e-23;9!UBERON:0001557;7.17e-23;9!UBERON:0002369;8.00e-18;3!UBERON:0001235;8.00e-18;3!UBERON:0006858;8.00e-18;3!UBERON:0000305;1.89e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.17e-23,9;UBERON:0002369,8.00e-18,3;UBERON:0001235,8.00e-18,3;UBERON:0006858,8.00e-18,3;UBERON:0001557,1.91e-11,19;UBERON:0000305,1.89e-08,7;UBERON:0004871,1.49e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,0.674338760312407,1.20505514941741,0.661763836394364,0.871517776369625,1.42362371466658,0.269662616320329,0.98110732562673,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,5.3453642549875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0,0.760531603454056,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21662387062389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,0.674338760312407,1.20505514941741,0.661763836394364,0.871517776369625,1.42362371466658,0.269662616320329,0.98110732562673,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,5.3453642549875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0,0.760531603454056,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21662387062389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:30415684..30415696,- | |short_description=p@chr13:30415684..30415696,- | ||
}} | }} |
Latest revision as of 15:29, 24 July 2015
Short description: | p@chr13:30415684..30415696, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:30415684..30415696, - |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 5.56e-26 | 2 |
steroid hormone secreting cell | 8.00e-18 | 3 |
amnion mesenchymal stem cell | 2.66e-11 | 5 |
glandular epithelial cell | 7.91e-07 | 9 |
endocrine cell | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.17e-23 | 9 |
adrenal gland | 8.00e-18 | 3 |
adrenal cortex | 8.00e-18 | 3 |
adrenal/interrenal gland | 8.00e-18 | 3 |
upper respiratory tract | 1.91e-11 | 19 |
amnion | 1.89e-08 | 7 |
somatic layer of lateral plate mesoderm | 1.49e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 1.32e-09 | 6 |