FFCP PHASE1:Hg19::chr10:104001289..104001310,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5309 | |EntrezGene=5309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9006 | |HGNC=9006 | ||
|TSSclassifier=strong | |||
|UniProt=O75364 | |UniProt=O75364 | ||
|association_with_transcript=-58bp_to_ENST00000370002,NM_005029,uc001kuu.1_5end | |association_with_transcript=-58bp_to_ENST00000370002,NM_005029,uc001kuu.1_5end | ||
|cluster_id=chr10:104001289..104001310,- | |||
|description=CAGE_peak_2_at_PITX3_5end | |description=CAGE_peak_2_at_PITX3_5end | ||
|id=chr10:104001289..104001310,- | |id=chr10:104001289..104001310,- | ||
|ontology_enrichment_celltype=CL:0000188!1.16e-08!9;CL:0000064!1.63e-08!3;CL:0005012!1.63e-08!3;CL:0000067!1.63e-08!3;CL:0002304!1.63e-08!3;CL:0000594!7.37e-07!3 | |ontology_enrichment_celltype=CL:0000188!1.16e-08!9;CL:0000064!1.63e-08!3;CL:0005012!1.63e-08!3;CL:0000067!1.63e-08!3;CL:0002304!1.63e-08!3;CL:0000594!7.37e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.16e-30;3!CL:0000067;1.16e-30;3!CL:0005012;1.16e-30;3!CL:0002304;1.16e-30;3!CL:0000075;6.68e-13;27!CL:0000222;4.22e-11;1!CL:0000306;5.87e-11;4!CL:0002222;5.87e-11;4!CL:0002224;5.87e-11;4!CL:0000710;3.35e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.50e-30,3;CL:0000067,1.50e-30,3;CL:0005012,1.50e-30,3;CL:0002304,1.50e-30,3;CL:0000075,6.90e-13,27;CL:0000306,6.33e-11,4;CL:0002222,6.33e-11,4;CL:0002224,6.33e-11,4;CL:0000710,3.36e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0004874;4.22e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!1.36e-10!4;UBERON:0000020!7.37e-09!23;UBERON:0001778!1.63e-08!3;UBERON:0001775!1.63e-08!3;UBERON:0001032!2.15e-08!24;UBERON:0004456!2.15e-08!24;UBERON:0007625!8.29e-08!11;UBERON:0002203!5.25e-07!6;UBERON:0001768!5.25e-07!6 | |ontology_enrichment_uberon=UBERON:0000488!1.36e-10!4;UBERON:0000020!7.37e-09!23;UBERON:0001778!1.63e-08!3;UBERON:0001775!1.63e-08!3;UBERON:0001032!2.15e-08!24;UBERON:0004456!2.15e-08!24;UBERON:0007625!8.29e-08!11;UBERON:0002203!5.25e-07!6;UBERON:0001768!5.25e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.16e-30;3!UBERON:0001775;1.16e-30;3!UBERON:0000020;1.15e-26;23!UBERON:0001032;1.61e-25;24!UBERON:0004456;1.61e-25;24!UBERON:0000488;3.55e-23;4!UBERON:0007625;1.17e-22;11!UBERON:0001134;1.89e-22;16!UBERON:0002036;1.89e-22;16!UBERON:0005090;6.69e-21;2!UBERON:0001630;6.69e-21;2!UBERON:0000341;9.53e-21;2!UBERON:0001801;8.43e-18;14!UBERON:0000970;1.52e-17;20!UBERON:0002104;1.08e-16;21!UBERON:0002203;1.15e-15;6!UBERON:0001768;1.15e-15;6!UBERON:0002200;1.15e-15;6!UBERON:0001723;3.62e-14;3!UBERON:0001033;3.62e-14;3!UBERON:0000019;4.24e-13;19!UBERON:0000047;4.24e-13;19!UBERON:0004088;4.24e-13;19!UBERON:0010230;4.24e-13;19!UBERON:0001456;7.66e-12;21!UBERON:0001389;1.45e-11;1!UBERON:0000026;1.45e-11;1!UBERON:0008784;1.45e-11;1!UBERON:0006058;1.45e-11;1!UBERON:0003663;1.45e-11;1!UBERON:0004256;1.45e-11;1!UBERON:0004708;1.45e-11;1!UBERON:0002101;1.45e-11;1!UBERON:0004709;1.45e-11;1!UBERON:0002529;1.45e-11;1!UBERON:0010538;1.45e-11;1!UBERON:0003661;1.45e-11;1!UBERON:0010890;1.45e-11;1!UBERON:0002471;1.45e-11;1!UBERON:0001383;1.45e-11;1!UBERON:0010758;1.45e-11;1!UBERON:0010707;1.45e-11;1!UBERON:0000978;1.45e-11;1!UBERON:0002103;1.45e-11;1!UBERON:0001665;1.45e-11;1!UBERON:0003823;1.45e-11;1!UBERON:0000154;1.45e-11;1!UBERON:0010709;1.45e-11;1!UBERON:0002385;1.88e-11;31!UBERON:0001015;1.88e-11;31!UBERON:0000383;1.88e-11;31!UBERON:0000989;4.22e-11;1!UBERON:0008811;4.22e-11;1!UBERON:0002426;4.22e-11;1!UBERON:0003831;4.22e-11;1!UBERON:0003898;4.22e-11;1!UBERON:0004830;4.22e-11;1!UBERON:0003830;4.22e-11;1!UBERON:0005175;4.22e-11;1!UBERON:0001774;4.22e-11;1!UBERON:0001103;4.22e-11;1!UBERON:0010077;5.87e-11;4!UBERON:0005389;5.87e-11;4!UBERON:0000484;5.87e-11;4!UBERON:0000965;5.87e-11;4!UBERON:0001803;5.87e-11;4!UBERON:0006876;8.54e-09;11!UBERON:0010371;1.04e-07;31!UBERON:0000974;1.57e-07;6!UBERON:0007811;4.81e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.50e-30,3;UBERON:0001775,1.50e-30,3;UBERON:0000020,1.99e-25,24;UBERON:0001032,1.99e-25,24;UBERON:0004456,1.99e-25,24;UBERON:0000488,4.29e-23,4;UBERON:0007625,1.40e-22,11;UBERON:0000341,5.20e-21,2;UBERON:0005090,6.37e-21,2;UBERON:0001630,6.37e-21,2;UBERON:0001801,9.71e-18,14;UBERON:0000970,1.16e-16,21;UBERON:0002104,1.16e-16,21;UBERON:0002203,1.30e-15,6;UBERON:0001768,1.30e-15,6;UBERON:0002200,1.30e-15,6;UBERON:0001723,4.73e-14,3;UBERON:0001033,4.73e-14,3;UBERON:0010056,4.73e-14,3;UBERON:0000019,2.13e-12,20;UBERON:0000047,2.13e-12,20;UBERON:0010312,2.13e-12,20;UBERON:0004088,2.13e-12,20;UBERON:0010230,2.13e-12,20;UBERON:0003072,2.13e-12,20;UBERON:0004128,2.13e-12,20;UBERON:0003071,2.13e-12,20;UBERON:0000153,8.57e-12,62;UBERON:0007811,8.57e-12,62;UBERON:0005418,1.45e-11,1;UBERON:0001389,1.45e-11,1;UBERON:0000026,1.45e-11,1;UBERON:0008784,1.45e-11,1;UBERON:0006058,1.45e-11,1;UBERON:0003663,1.45e-11,1;UBERON:0004256,1.45e-11,1;UBERON:0004708,1.45e-11,1;UBERON:0002101,1.45e-11,1;UBERON:0004709,1.45e-11,1;UBERON:0002529,1.45e-11,1;UBERON:0010538,1.45e-11,1;UBERON:0003661,1.45e-11,1;UBERON:0010890,1.45e-11,1;UBERON:0002471,1.45e-11,1;UBERON:0001383,1.45e-11,1;UBERON:0004357,1.45e-11,1;UBERON:0004347,1.45e-11,1;UBERON:0005420,1.45e-11,1;UBERON:0005732,1.45e-11,1;UBERON:0010758,1.45e-11,1;UBERON:0010707,1.45e-11,1;UBERON:0000978,1.45e-11,1;UBERON:0002103,1.45e-11,1;UBERON:0001665,1.45e-11,1;UBERON:0003823,1.45e-11,1;UBERON:0000154,1.45e-11,1;UBERON:0010709,1.45e-11,1;UBERON:0005733,1.45e-11,1;UBERON:0005730,1.45e-11,1;UBERON:0001456,2.92e-11,22;UBERON:0002426,4.01e-11,1;UBERON:0003831,4.01e-11,1;UBERON:0003898,4.01e-11,1;UBERON:0004830,4.01e-11,1;UBERON:0003830,4.01e-11,1;UBERON:0005175,4.01e-11,1;UBERON:0001774,4.01e-11,1;UBERON:0001103,4.01e-11,1;UBERON:0010084,4.01e-11,1;UBERON:0000989,4.44e-11,1;UBERON:0008811,4.44e-11,1;UBERON:0006258,4.44e-11,1;UBERON:0005876,4.44e-11,1;UBERON:0004874,4.44e-11,1;UBERON:0010077,6.33e-11,4;UBERON:0005389,6.33e-11,4;UBERON:0000484,6.33e-11,4;UBERON:0002546,6.33e-11,4;UBERON:0000965,6.33e-11,4;UBERON:0001803,6.33e-11,4;UBERON:0003073,6.33e-11,4;UBERON:0005426,6.33e-11,4;UBERON:0001444,3.00e-09,49;UBERON:0006876,9.13e-09,11;UBERON:0000033,5.27e-08,56;UBERON:0005085,5.94e-08,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,2.26883561193763,2.21729397462564,2.0202000709419,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626984899610432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0,0.310983165046111,0,0.36497735907583,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,1.44331342025273,4.17349457910277,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,7.83032818166188,0,0,0.275673144969061,0.107420244868274,0.290033387828457,0.170453254832202,5.2528901031575,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80784592624426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0.669514372325618,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0,0.321506296930038,0.137539436597234,0,0.2249738915515,0,0,0,0.0788057072991982,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0.116241425368125,7.64976398131349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88457302312737,2.36124455769368,11.598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0.250707539292375,0,0,0,0,1.91910583710883,2.3806443146374,0,0,0,0.12729431655633,0,2.17716747896961,1.36893320434112,0,0,0.665320713092027,0,0.213454691755431,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,2.26883561193763,2.21729397462564,2.0202000709419,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626984899610432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0,0.310983165046111,0,0.36497735907583,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,1.44331342025273,4.17349457910277,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,7.83032818166188,0,0,0.275673144969061,0.107420244868274,0.290033387828457,0.170453254832202,5.2528901031575,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80784592624426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0.669514372325618,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0,0.321506296930038,0.137539436597234,0,0.2249738915515,0,0,0,0.0788057072991982,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0.116241425368125,7.64976398131349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88457302312737,2.36124455769368,11.598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0.250707539292375,0,0,0,0,1.91910583710883,2.3806443146374,0,0,0,0.12729431655633,0,2.17716747896961,1.36893320434112,0,0,0.665320713092027,0,0.213454691755431,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p2@PITX3 | |short_description=p2@PITX3 | ||
}} | }} |
Latest revision as of 00:35, 16 September 2015
Short description: | p2@PITX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PITX3_5end |
Coexpression cluster: | NA |
Association with transcript: | -58bp_to_ENST00000370002, NM_005029, uc001kuu.1_5end |
EntrezGene: | PITX3 |
HGNC: | 9006 |
UniProt: | O75364 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.50e-30 | 3 |
ciliated epithelial cell | 1.50e-30 | 3 |
multi-ciliated epithelial cell | 1.50e-30 | 3 |
non-pigmented ciliary epithelial cell | 1.50e-30 | 3 |
columnar/cuboidal epithelial cell | 6.90e-13 | 27 |
crystallin accumulating cell | 6.33e-11 | 4 |
vertebrate lens cell | 6.33e-11 | 4 |
lens epithelial cell | 6.33e-11 | 4 |
neurecto-epithelial cell | 3.36e-08 | 20 |