FFCP PHASE1:Mm9::chr5:113919600..113919618,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320916 | |EntrezGene=320916 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=D4PHA7,Q8C7Q3 | |UniProt=D4PHA7,Q8C7Q3 | ||
|association_with_transcript=133bp_to_ENSMUST00000094452,NM_177292,uc008yyh.2,uc008yyi.2_5end | |association_with_transcript=133bp_to_ENSMUST00000094452,NM_177292,uc008yyh.2,uc008yyi.2_5end | ||
|cluster_id=chr5:113919600..113919618,+ | |||
|description=CAGE_peak_2_at_Wscd2_5end | |description=CAGE_peak_2_at_Wscd2_5end | ||
|id=chr5:113919600..113919618,+ | |id=chr5:113919600..113919618,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.30e-08!52;UBERON:0005068!3.30e-08!52;UBERON:0006241!3.30e-08!52;UBERON:0007135!3.30e-08!52;UBERON:0000033!5.30e-08!63;UBERON:0004121!7.07e-08!102;UBERON:0000924!7.07e-08!102;UBERON:0006601!7.07e-08!102;UBERON:0000955!8.88e-08!50;UBERON:0006238!8.88e-08!50;UBERON:0002616!1.24e-07!49;UBERON:0002346!1.39e-07!71;UBERON:0003075!1.39e-07!71;UBERON:0007284!1.39e-07!71;UBERON:0001017!3.14e-07!73;UBERON:0005743!3.14e-07!73 | |ontology_enrichment_uberon=UBERON:0001049!3.30e-08!52;UBERON:0005068!3.30e-08!52;UBERON:0006241!3.30e-08!52;UBERON:0007135!3.30e-08!52;UBERON:0000033!5.30e-08!63;UBERON:0004121!7.07e-08!102;UBERON:0000924!7.07e-08!102;UBERON:0006601!7.07e-08!102;UBERON:0000955!8.88e-08!50;UBERON:0006238!8.88e-08!50;UBERON:0002616!1.24e-07!49;UBERON:0002346!1.39e-07!71;UBERON:0003075!1.39e-07!71;UBERON:0007284!1.39e-07!71;UBERON:0001017!3.14e-07!73;UBERON:0005743!3.14e-07!73 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.54e-07,52;UBERON:0005068,8.54e-07,52;UBERON:0006241,8.54e-07,52;UBERON:0007135,8.54e-07,52;UBERON:0003076,8.94e-07,12;UBERON:0003057,8.94e-07,12 | |||
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| |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.96222640742402,6.15121311656521,5.24960727500565,1.25987779462826,1.43752564364972,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0.898800331555214,2.68952813725088,0,0,0.210324961351382,1.71390590642282,1.54607978666129,0.367472397644862,0.287536413054709,0,1.10115880999389,0.766124028511126,0.921639199537461,0.263772575460388,0.182975287204819,0,2.79182999001381,0.56276261003168,1.22238598221448,0.883885756421003,0.996601765593721,0,0,0,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0,0,8.73229202615419,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0.173485326766136,0.608930956624282,0.691846491768175,0.301445281105245,0.587943535678524,1.50799909595611,0,2.60278842455841,0,1.29413479957927,1.98757366614354,0.969750506270444,0,37.475942017478,45.6593820853332,1.02182822083437,0,0,0,1.49790639404823,0.457500602818626,0.502617408451458,1.56441888173049,0.767146371990992,0.83115217823824,0.811206315338788,0.407357455401265,0.622034853050465,0,2.10441855886474,0.130120442962704,0.229902104433473,0.360124259610698,0.150704817835715,0.272145996605311,0.2562274405697,0.281105173679186,1.03481348295606,0.215567992932842,0.189106080167819,1.23165786914764,1.53437012699302,2.50242524303038,2.089512999133,0.411564272815887,0.796137067273973,0,0,0,0,0.703578179943289,0.720248245844059,0.473489471170421,0.590292695242212,0.308534225774757,0.232533944750408,0,0.233530684734339,0.329119699826961,0.492502392237286,0.486412857275134,0.438599962275997,0.439100230582101,0.268412837520744,1.47202963994889,0.514523061896422,0,1.05780226665418,0,0.696710015581316,1.03093969057675,1.00841762311671,1.11189021922435,2.28270751335071,0.474529061544512,0.494096864172033,0,1.1937388322469,0.58489226135736,0,0.216138049874694,0.796565093017469,0,0.228497025219458,0,0,0,0.420814919341911,1.07502113111237,0.885660887877613,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0.554259570499814,0.757965647081939,0.651859905768103,1.35796068620151,1.17345124144251,1.67506257441816,1.19021820443007,0.585400943573396,0.788175720530955,1.10732344824387,1.91345722388985,2.29408640602033,1.03610989119537,1.15719246865209,0,0,0.983528546038072,0.827810238914197,1.44495530989013,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.642642632843614,0.425820255624806,0.35613120733451,0.977321756121456,0.329940245945071,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0.540183282093931,0,0.428674070063185,0.177340233642274,0.535106452806212,0.658196082408484,0.304464949114599,0,0,0.661585194164886,0.32977250588296,0.322928853391811,0.603129249281559,0.238744688006273,0.492422699235184,0.874442509889552,1.48340241608408,0,0.206386867963223,0.740778109478847,0,0.27338845544205,0.228778173206523,0,0,0,1.90934123603023,0.316335993581135,0.609958401380546,0.86404272657441,0.836353184057875,1.52853794622324,2.42755823492677,2.39695021603474,3.66458318777641,1.8146096260851,0,0,0.149516546043979,0.330916980914195,0.388902376688095,0.516639293910924,1.01373675294467,0.117357238645754,0.13020438484395,0.629156066554265,0,0,0,0.405450430580328,0.205421914329655,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,9.46629010757733,1.31377732815827,0.36630324853453,0.214368379079066,0.501572104035363,1.6942555278512,0.920650473014354,1.14579102687879,1.3748254587495,2.74033007908257,0.755393897389701,1.35004500046361,0.45032120322422,0.453142408984205,1.03552062350364,0.103787347584177,0,0.341467211508268,0.729320151204882,0.419226325255965,1.10306105070008,0.44449345560323,0.824140228955577,0.962757628775446,0.758091635291392,0.760437899670719,0.754505365544305,0.187283014939765,0.640251524048693,0.229741875822453,0.476293691283074,0.927074607558844,0.192909220463705,0.412085900803307,1.17759136107518,0,0.887379030796687,0,0.726732083161643,0.752875043322645,0.676916863133412,0.365855945745545,0.526139422875686,0.543216455383447,1.12228454331548,0.711810108745045,0.985044823755635,0.409231043169689,0.929621047115796,1.35034627686799,0.249810577937946,0.467863216890817,1.07435527024149,0.57386499620653,0.882365676478062,0.927471342481686 | ||
|short_description=p2@Wscd2 | |short_description=p2@Wscd2 | ||
}} | }} |
Latest revision as of 16:05, 1 October 2015
Short description: | p2@Wscd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Wscd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 133bp_to_ENSMUST00000094452, NM_177292, uc008yyh.2, uc008yyi.2_5end |
EntrezGene: | Wscd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 8.54e-07 | 52 |
neural rod | 8.54e-07 | 52 |
future spinal cord | 8.54e-07 | 52 |
neural keel | 8.54e-07 | 52 |
posterior neural tube | 8.94e-07 | 12 |
chordal neural plate | 8.94e-07 | 12 |