FFCP PHASE1:Hg19::chr10:128076983..128076990,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8038 | |EntrezGene=8038 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=190 | |HGNC=190 | ||
|TSSclassifier=strong | |||
|UniProt=O43184,Q5JRP2 | |UniProt=O43184,Q5JRP2 | ||
|association_with_transcript=33bp_to_ENST00000368676,ENST00000368679,ENST00000448723_5end | |association_with_transcript=33bp_to_ENST00000368676,ENST00000368679,ENST00000448723_5end | ||
|cluster_id=chr10:128076983..128076990,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_6_at_ADAM12_5end | |description=CAGE_peak_6_at_ADAM12_5end | ||
|id=chr10:128076983..128076990,- | |id=chr10:128076983..128076990,- | ||
|ontology_enrichment_celltype=CL:0000055!2.57e-32!180;CL:0000048!4.12e-18!430;CL:0000723!3.92e-17!436;CL:0000034!1.22e-16!444;CL:0000057!4.22e-16!75;CL:0000680!6.57e-13!57;CL:0000056!6.57e-13!57;CL:0000355!6.57e-13!57;CL:0002371!1.50e-11!591;CL:0000187!1.83e-11!54;CL:0000183!1.84e-11!59;CL:0000144!2.62e-11!625;CL:0000393!7.13e-10!60;CL:0000211!7.13e-10!60;CL:0000219!7.47e-10!390;CL:0002320!7.98e-10!365;CL:0000192!7.41e-09!42;CL:0000514!7.41e-09!42;CL:0000134!1.08e-08!358;CL:0002620!3.91e-08!23;CL:0000136!1.09e-07!15;CL:0000548!1.44e-07!679;CL:0000004!1.44e-07!679;CL:0000255!1.44e-07!679;CL:0000359!1.87e-07!32;CL:0000499!2.02e-07!27;CL:0000012!2.82e-07!682 | |ontology_enrichment_celltype=CL:0000055!2.57e-32!180;CL:0000048!4.12e-18!430;CL:0000723!3.92e-17!436;CL:0000034!1.22e-16!444;CL:0000057!4.22e-16!75;CL:0000680!6.57e-13!57;CL:0000056!6.57e-13!57;CL:0000355!6.57e-13!57;CL:0002371!1.50e-11!591;CL:0000187!1.83e-11!54;CL:0000183!1.84e-11!59;CL:0000144!2.62e-11!625;CL:0000393!7.13e-10!60;CL:0000211!7.13e-10!60;CL:0000219!7.47e-10!390;CL:0002320!7.98e-10!365;CL:0000192!7.41e-09!42;CL:0000514!7.41e-09!42;CL:0000134!1.08e-08!358;CL:0002620!3.91e-08!23;CL:0000136!1.09e-07!15;CL:0000548!1.44e-07!679;CL:0000004!1.44e-07!679;CL:0000255!1.44e-07!679;CL:0000359!1.87e-07!32;CL:0000499!2.02e-07!27;CL:0000012!2.82e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.09e-10;55!CL:0000048;3.78e-09;58!CL:0002620;9.90e-08;23!CL:0000723;3.96e-07;61!CL:0002570;8.28e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,5.37e-14,427;CL:0000723,1.64e-13,433;CL:0000034,6.92e-13,441;CL:0000057,4.01e-11,76;CL:0002320,4.58e-10,361;CL:0000134,2.10e-09,354;CL:0000219,3.37e-09,386;CL:0002620,1.12e-07,23;CL:0002570,6.22e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.82e-07!14 | |ontology_enrichment_disease=DOID:2394!5.82e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.40e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.63e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.29e-11!61;UBERON:0002036!3.29e-11!61;UBERON:0003082!3.29e-11!61;UBERON:0000914!4.81e-11!83;UBERON:0002329!4.81e-11!83;UBERON:0003077!4.81e-11!83;UBERON:0003059!4.81e-11!83;UBERON:0007282!4.81e-11!83;UBERON:0009618!4.81e-11!83;UBERON:0007285!4.81e-11!83;UBERON:0002384!6.75e-11!375;UBERON:0002385!1.87e-10!63;UBERON:0001015!1.87e-10!63;UBERON:0000383!1.87e-10!63;UBERON:0004290!4.85e-10!70;UBERON:0000486!5.84e-08!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.35e-08;6!UBERON:0002358;7.35e-08;6!UBERON:0003684;7.35e-08;6!UBERON:0001178;7.35e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.15e-11,371;UBERON:0003688,1.41e-07,6;UBERON:0002358,1.41e-07,6;UBERON:0003684,1.41e-07,6;UBERON:0001178,1.41e-07,6 | |||
|phase1_expression=0.363356758541113,2.78330681058278,2.39622486963151,1.0007329835313,0.446961094427288,0,0,5.05375898741465,0.783556884599516,0,0,0,0,0.37129905888014,0.662794751455832,0.672325146451775,0,0,0,1.84681587115182,1.02000345622126,2.19418305034661,0.286235987131057,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,0.50133791063589,1.44846518960824,3.1811437882044,1.94653948121054,0.756278537312543,0.221729397462564,0.087834785693126,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.25326102332916,0.529636723252875,6.3104056564739,1.41867352879343,0,0,1.2333377420858,0.311211035399766,0,0,5.75158225050739,6.33793516927999,0,0,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0,0.103325781175765,1.18800285728205,0.494533858557114,0.910161361938026,0,0.168336113954066,0.250237039743928,0,0.877955241761676,0.30648779579902,0.45071417671979,0.226864366320042,1.25572744982203,0.640672166455702,1.90738711043606,0.600182192168805,1.03052529238439,1.28820270022815,0.18611685633159,2.86919764810153,2.33848812386877,1.26216887122057,1.28869858099219,0.484938170456436,1.42003837006646,1.10827308050404,1.01736355386293,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,1.38134921352481,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,2.057870056657,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4486426652716,1.49682337822484,0.207328115540772,0.144119953416961,0.50496973370552,0.190493682876507,0,0,0,0,0.901029173531752,0.285826432630578,0.448524337381443,0.43596006883328,0.80672114403045,8.27338980849778,0,1.690605505112,2.12750493267896,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,2.63587341040741,2.29723871668228,1.42636905040718,0.723906533337896,2.05476322550383,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0.502548796003046,0,0,0,0,0.36807447515742,0,0,1.66376689224646,2.67643483195743,0.473107245101804,0.702848489956279,0.902838299183157,2.27407504055985,0,0.664225598535437,0.921845842708516,0.347534457872331,3.32861967686659,1.71571711905428,0,0,0,0,0,0,0,0.460385919864187,1.12264037773229,1.40953064181271,1.02341449813341,1.28683136914886,0,0.771048469013278,0.532685175939381,1.23190734020714,1.03850885836724,0.929683027679674,0,0,0,1.14814448164607,1.27463817604702,0.524497659837696,0,0,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,6.90374778039739,0.0915694648183434,0,0,0,1.6068392984416,0.096670718292122,1.07834031980251,1.07452572308291,0.137836572484531,0.429680979473094,0.725083469571143,0.426133137080504,3.20515328328254,0,0,0.127612712494584,0,0,2.51849877464512,0,6.16067160352178,0,0.869932992075073,0.18532421910392,0.286249773483982,0,1.2655176988749,0.38126038784765,0,0,0.318203247925937,0.78494864019923,0.539617372749944,1.09814811894422,1.06031162111118,1.01091240786658,1.58510321173008,0.842516912477962,0.48763373908959,1.21856744815642,2.11300293513511,0.136499911407986,0.282810863907425,0,0,0.66343897524122,0.876901770507525,0,0,3.04365565444056,0.30982349809975,1.40847801266121,0,0.196498082026242,1.07001315444375,0.354761064070598,0.633322905892992,0.987884678879706,0,0,0,0,0,6.49592225359776,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.71623345421307,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0.957003479195758,0.915975934018623,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0.387025325156341,0.292357268344742,0.164230914106418,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0.160317640503067,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.134366944973453,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,1.19730191562487,0,1.36310417428337,0.113312091520126,0,0,0.129282956361551,0,0.513260513652988,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,1.5041393641362,0.306345576763462,0.655745261419609,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,5.22391810104059,4.67426619694449,7.21247619953397,0.757612021100357,2.0125432140206,5.33886732957922,0.228840068396924,3.17584939902802,3.26418121223839,1.77426179987561,1.75226443880073,0,2.32894435314389,1.24411862352257,3.98762571836992,1.04349012362347,1.50257608997218,1.14241563650639,0.813741466409323,1.63663793282303,1.1815161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| ||
|short_description=p6@ADAM12 | |short_description=p6@ADAM12 | ||
}} | }} |
Latest revision as of 00:23, 17 September 2015
Short description: | p6@ADAM12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ADAM12_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 33bp_to_ENST00000368676, ENST00000368679, ENST00000448723_5end |
EntrezGene: | ADAM12 |
HGNC: | 190 |
UniProt: | O43184Q5JRP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 5.37e-14 | 427 |
somatic stem cell | 1.64e-13 | 433 |
stem cell | 6.92e-13 | 441 |
fibroblast | 4.01e-11 | 76 |
connective tissue cell | 4.58e-10 | 361 |
mesenchymal cell | 2.10e-09 | 354 |
motile cell | 3.37e-09 | 386 |
skin fibroblast | 1.12e-07 | 23 |
mesenchymal stem cell of adipose | 6.22e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.15e-11 | 371 |
omentum | 1.41e-07 | 6 |
peritoneum | 1.41e-07 | 6 |
abdominal cavity | 1.41e-07 | 6 |
visceral peritoneum | 1.41e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.63e-12 | 14 |