FFCP PHASE1:Hg19::chr10:135122648..135122690,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10844 | |EntrezGene=10844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18599 | |HGNC=18599 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BSJ2 | |UniProt=Q9BSJ2 | ||
|association_with_transcript=-4bp_to_ENST00000368563,NM_006659,uc001lmg.1,uc009ybk.1,uc010qvc.1,uc010qvd.1_5end | |association_with_transcript=-4bp_to_ENST00000368563,NM_006659,uc001lmg.1,uc009ybk.1,uc010qvc.1,uc010qvd.1_5end | ||
|cluster_id=chr10:135122648..135122690,- | |||
|description=CAGE_peak_2_at_TUBGCP2_5end | |description=CAGE_peak_2_at_TUBGCP2_5end | ||
|id=chr10:135122648..135122690,- | |id=chr10:135122648..135122690,- | ||
|ontology_enrichment_celltype=CL:0000548!7.15e-21!679;CL:0000004!7.15e-21!679;CL:0000255!7.15e-21!679;CL:0000012!2.06e-20!682;CL:0000144!2.12e-16!625;CL:0002371!7.07e-16!591;CL:0000003!1.45e-13!722;CL:0000063!5.24e-11!578;CL:0000222!5.50e-09!119;CL:0000183!9.43e-09!59;CL:0000055!2.49e-08!180;CL:0000066!3.15e-08!254;CL:0000192!9.39e-08!42;CL:0000514!9.39e-08!42;CL:0002321!1.45e-07!248;CL:0000220!2.30e-07!246;CL:0000187!8.16e-07!54 | |ontology_enrichment_celltype=CL:0000548!7.15e-21!679;CL:0000004!7.15e-21!679;CL:0000255!7.15e-21!679;CL:0000012!2.06e-20!682;CL:0000144!2.12e-16!625;CL:0002371!7.07e-16!591;CL:0000003!1.45e-13!722;CL:0000063!5.24e-11!578;CL:0000222!5.50e-09!119;CL:0000183!9.43e-09!59;CL:0000055!2.49e-08!180;CL:0000066!3.15e-08!254;CL:0000192!9.39e-08!42;CL:0000514!9.39e-08!42;CL:0002321!1.45e-07!248;CL:0000220!2.30e-07!246;CL:0000187!8.16e-07!54 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.83e-09,121;CL:0000066,2.55e-08,253;CL:0002321,1.20e-07,250;CL:0000192,1.83e-07,43;CL:0000514,1.83e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!5.35e-10!448;UBERON:0004120!5.35e-10!448;UBERON:0006603!5.35e-10!448;UBERON:0001637!7.14e-08!42;UBERON:0003509!7.14e-08!42;UBERON:0004572!7.14e-08!42;UBERON:0005256!1.05e-07!143;UBERON:0003081!1.53e-07!216;UBERON:0003914!2.74e-07!118;UBERON:0002100!4.13e-07!216;UBERON:0002049!6.73e-07!79;UBERON:0007798!6.73e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.76e-08,199;UBERON:0001637,7.14e-08,42;UBERON:0003509,7.14e-08,42;UBERON:0004572,7.14e-08,42;UBERON:0003104,1.93e-07,160;UBERON:0009142,1.93e-07,160;UBERON:0003914,1.99e-07,117;UBERON:0007503,2.01e-07,78;UBERON:0002049,2.82e-07,78;UBERON:0007798,2.82e-07,78;UBERON:0000490,5.69e-07,148 | |||
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| ||
|short_description=p2@TUBGCP2 | |short_description=p2@TUBGCP2 | ||
}} | }} |
Latest revision as of 05:28, 17 September 2015
Short description: | p2@TUBGCP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TUBGCP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000368563, NM_006659, uc001lmg.1, uc009ybk.1, uc010qvc.1, uc010qvd.1_5end |
EntrezGene: | TUBGCP2 |
HGNC: | 18599 |
UniProt: | Q9BSJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.83e-09 | 121 |
epithelial cell | 2.55e-08 | 253 |
embryonic cell | 1.20e-07 | 250 |
smooth muscle cell | 1.83e-07 | 43 |
smooth muscle myoblast | 1.83e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
trunk | 3.76e-08 | 199 |
artery | 7.14e-08 | 42 |
arterial blood vessel | 7.14e-08 | 42 |
arterial system | 7.14e-08 | 42 |
mesenchyme | 1.93e-07 | 160 |
entire embryonic mesenchyme | 1.93e-07 | 160 |
epithelial tube | 1.99e-07 | 117 |
epithelial vesicle | 2.01e-07 | 78 |
vasculature | 2.82e-07 | 78 |
vascular system | 2.82e-07 | 78 |
unilaminar epithelium | 5.69e-07 | 148 |