FFCP PHASE1:Mm9::chr5:144670842..144670916,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18861 | |EntrezGene=18861 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=973 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q158,B9EJ22 | |UniProt=E9Q158,B9EJ22 | ||
|association_with_transcript=0bp_to_ENSMUST00000085710,ENSMUST00000110707,ENSMUST00000110710,ENSMUST00000126331,ENSMUST00000147910,ENSMUST00000154781,ENSMUST00000168085,NM_008886,uc009aky.1,uc009akz.1,uc009ala.1,uc009alb.1,uc012egk.1,uc012egl.1_5end | |association_with_transcript=0bp_to_ENSMUST00000085710,ENSMUST00000110707,ENSMUST00000110710,ENSMUST00000126331,ENSMUST00000147910,ENSMUST00000154781,ENSMUST00000168085,NM_008886,uc009aky.1,uc009akz.1,uc009ala.1,uc009alb.1,uc012egk.1,uc012egl.1_5end | ||
|cluster_id=chr5:144670842..144670916,+ | |||
|description=CAGE_peak_1_at_Pms2_5end | |description=CAGE_peak_1_at_Pms2_5end | ||
|id=chr5:144670842..144670916,+ | |id=chr5:144670842..144670916,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.01e-11!94;UBERON:0004177!1.33e-09!29;UBERON:0007811!5.84e-09!86;UBERON:0002370!6.62e-07!23;UBERON:0000974!6.62e-07!23;UBERON:0004807!6.62e-07!23;UBERON:0005058!6.62e-07!23;UBERON:0003351!6.62e-07!23;UBERON:0009113!6.62e-07!23;UBERON:0003295!6.62e-07!23;UBERON:0009722!6.62e-07!23;UBERON:0005562!6.62e-07!23;UBERON:0007690!6.62e-07!23 | |ontology_enrichment_uberon=UBERON:0000153!1.01e-11!94;UBERON:0004177!1.33e-09!29;UBERON:0007811!5.84e-09!86;UBERON:0002370!6.62e-07!23;UBERON:0000974!6.62e-07!23;UBERON:0004807!6.62e-07!23;UBERON:0005058!6.62e-07!23;UBERON:0003351!6.62e-07!23;UBERON:0009113!6.62e-07!23;UBERON:0003295!6.62e-07!23;UBERON:0009722!6.62e-07!23;UBERON:0005562!6.62e-07!23;UBERON:0007690!6.62e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.33e-09,29;UBERON:0005057,1.33e-09,29;UBERON:0000153,3.17e-09,43;UBERON:0007811,6.29e-07,36;UBERON:0002370,6.62e-07,23;UBERON:0000974,6.62e-07,23;UBERON:0004807,6.62e-07,23;UBERON:0005058,6.62e-07,23;UBERON:0003351,6.62e-07,23;UBERON:0009113,6.62e-07,23;UBERON:0003295,6.62e-07,23;UBERON:0009722,6.62e-07,23;UBERON:0005562,6.62e-07,23;UBERON:0007690,6.62e-07,23 | |||
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|phase1_expression=12.9720566154883,2.44282785347553,1.81999695755814,2.41971369045464,1.50268718983904,5.03637815735669,7.47560449905682,20.6597317506522,20.1327872676883,18.7251621057595,20.2037202506096,16.2735204350486,30.6449306576858,28.4990511885932,24.650122374359,29.7638643063044,33.578970150151,26.0256286420546,28.9311454908109,18.2487550273153,12.161190491603,21.5461364105921,24.8139799681989,8.15961356246374,6.65286915094793,1.72269589234506,1.7230479846363,3.66301095566011,4.75058548640935,5.54466285471848,7.31710685162506,19.6859508772486,19.6820732027062,15.8481681015439,12.4206196493048,13.4650062740379,11.637653306955,8.78916424547506,9.37602413428561,12.0410461113974,4.70585190424811,4.78131839470912,9.22469670759192,10.1976422560218,9.22530074097583,7.15832333430558,3.12956537739216,1.09012578190223,2.63623419281366,5.05517737593137,6.01941612989059,0,20.8050431511593,23.211588544363,31.2567233202492,3.60163210450326,6.30373567865265,3.6097046459421,13.5552028775931,12.1667925232568,8.23980824558033,3.72728985276045,4.4464739805557,0.899899717281399,0,1.4209602298922,1.49800055259202,3.45796474789399,13.0648911508682,10.8004750665353,11.1472229516232,8.56952953211411,7.50953039235486,17.5161842877384,14.7602025368084,17.4651569455904,7.70811166995721,14.1732945274558,11.8277030607307,12.924856197559,15.7358746996145,13.022834263919,10.6089539620525,12.9435400307286,10.8486755921535,10.606629077052,18.2235751422852,14.5391567743734,8.32988126665025,10.5044468548432,12.4641730141721,3.44169550792555,4.0798280022465,1.61910957491345,3.24888208723835,2.24013443548668,9.97155382935438,5.79463096765396,7.01422212427746,3.88673531961374,8.59144860637751,5.13305909657271,5.09610479413291,7.11066703153331,4.5463118612355,5.32055717497707,5.05524445014783,4.90990682791958,36.251303710604,13.2113503767694,15.7871647357184,10.9607572192371,14.5287763271317,10.2491395575783,15.521709341913,8.54532821041793,9.64060374164058,10.1219549843938,24.7690954545965,13.5884153955824,18.1090045137523,23.2740121504907,3.72783522436244,33.0842300623048,26.3902850584953,5.8755122697976,15.9354115592874,19.7967901227825,16.9003402007176,17.6752954497691,15.5550204958333,20.9842768028484,22.5971616249959,26.5944075623544,13.9217989854905,19.4689515681309,15.4795833052481,15.3020573850414,11.3725241295154,10.1012090825508,24.4626432769883,16.5529515192101,21.7875177064473,23.5099515823715,21.4314972326683,24.4697205744063,16.3978017979525,17.3331258395141,27.377135102471,24.5837904218165,22.6976950171494,16.2204841996405,21.6876854395966,20.5468778248078,19.1377386859387,21.6947350832158,16.1509033082044,17.7570055909153,11.3665399758237,19.6769483908727,20.4037672183554,18.5463923304845,17.992599904476,14.1670246858131,13.5755059340893,16.2773761325285,10.1943892531855,10.1585847859437,12.8356682932515,11.8200574136949,8.91756905004413,5.70179950958796,9.44065495751518,9.26024289446565,19.1363853193356,21.4041593748912,2.97376904685418,7.93351699990633,22.82184280727,20.4368271237186,18.4280469690593,12.3026950020239,12.008414367623,11.223311940641,8.54152310780121,10.0466362381647,9.29940272560997,10.544693018181,6.62877896205008,8.98819408654222,7.5648317456143,8.76221602319216,24.4671592229475,18.1655135049469,13.5249282807697,14.6628956048626,16.8738663835834,11.5724102819026,10.9399209224965,8.70899873079653,7.69293766422737,7.52722699922983,3.85388415213294,20.3551028973635,23.193961423358,25.1845565871036,24.7489348093974,20.7412357387078,17.569183772918,14.6725030099913,14.7543056365282,10.9824565275233,8.62609239164127,4.46569137202204,5.30464044294753,5.80931419278357,4.66433275156972,5.78932225636041,14.4107488329952,19.7071068241304,19.8817271259272,19.860175035697,15.2548661387526,17.0856382590652,10.7119638398706,7.61021226645415,14.3447981136634,13.9522754478728,14.3509291791738,14.4199716949849,13.9874835311375,11.8612228036839,4.52373851817817,5.98296252200581,7.86822836830458,12.1412168374082,16.3761601787548,15.1203075703942,8.19674726883377,9.08895337935743,16.0909191902291,13.6653560503823,14.6487910458303,12.6653462914853,16.0415045339324,9.90767857760913,15.382806663646,10.8134667427185,17.7879500075936,29.8828824272281,14.3359486060351,11.3961986347043,16.9402437727719,12.5377293459127,6.63725691699814,18.2085477116236,14.511530734308,16.2200368590072,6.496641643377,15.9866276930842,11.62927319257,19.2672876623078,15.6858846489277,11.3773232856894,8.4334886859999,6.18813259489121,18.0432991049508,21.4272701897259,15.0056073187995,13.9319072770535,20.0394464015769,16.4099312193905,13.9866667511803,10.656273219011,8.44818149029357,9.10877904714427,5.29268155331909,10.0580614294303,15.9849782428946,13.9925985833322,13.0115854963419,11.8181447816444,9.91034844541493,21.3239097312086,21.8714727421251,16.9237231729842,22.0381487569957,38.992270599971,38.274383761887,31.3426097292936,12.4084253895514,12.7355821614529,14.9255971708778,5.72802370809068,20.0873355924021,19.1120299099238,13.3926622619034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| ||
|short_description=p1@Pms2 | |short_description=p1@Pms2 | ||
}} | }} |
Latest revision as of 17:07, 25 September 2015
Short description: | p1@Pms2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pms2_5end |
Coexpression cluster: | MCL_coexpression_mm9:973 |
Association with transcript: | 0bp_to_ENSMUST00000085710, ENSMUST00000110707, ENSMUST00000110710, ENSMUST00000126331, ENSMUST00000147910, ENSMUST00000154781, ENSMUST00000168085, NM_008886, uc009aky.1, uc009akz.1, uc009ala.1, uc009alb.1, uc012egk.1, uc012egl.1_5end |
EntrezGene: | Pms2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.33e-09 | 29 |
immune organ | 1.33e-09 | 29 |
anterior region of body | 3.17e-09 | 43 |
craniocervical region | 6.29e-07 | 36 |
thymus | 6.62e-07 | 23 |
neck | 6.62e-07 | 23 |
respiratory system epithelium | 6.62e-07 | 23 |
hemolymphoid system gland | 6.62e-07 | 23 |
pharyngeal epithelium | 6.62e-07 | 23 |
thymic region | 6.62e-07 | 23 |
pharyngeal gland | 6.62e-07 | 23 |
entire pharyngeal arch endoderm | 6.62e-07 | 23 |
thymus primordium | 6.62e-07 | 23 |
early pharyngeal endoderm | 6.62e-07 | 23 |