FFCP PHASE1:Mm9::chr6:90412608..90412630,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66277 | |EntrezGene=66277 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3582 | |||
|TSSclassifier=NA | |||
|UniProt=Q9EPW2 | |UniProt=Q9EPW2 | ||
|association_with_transcript=0bp_to_NM_023184,uc009cxj.1_5end | |association_with_transcript=0bp_to_NM_023184,uc009cxj.1_5end | ||
|cluster_id=chr6:90412608..90412630,+ | |||
|description=CAGE_peak_2_at_Klf15_5end | |description=CAGE_peak_2_at_Klf15_5end | ||
|id=chr6:90412608..90412630,+ | |id=chr6:90412608..90412630,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.60e-19!122;UBERON:0000025!5.54e-18!114;UBERON:0001017!1.08e-10!73;UBERON:0005743!1.08e-10!73;UBERON:0005177!1.20e-10!85;UBERON:0000073!6.54e-10!75;UBERON:0001016!6.54e-10!75;UBERON:0000475!1.28e-09!200;UBERON:0004121!1.42e-09!102;UBERON:0000924!1.42e-09!102;UBERON:0006601!1.42e-09!102;UBERON:0002100!1.57e-09!98;UBERON:0000477!1.06e-08!154;UBERON:0001049!4.01e-08!52;UBERON:0005068!4.01e-08!52;UBERON:0006241!4.01e-08!52;UBERON:0007135!4.01e-08!52;UBERON:0000468!4.18e-08!333;UBERON:0003914!4.88e-08!47;UBERON:0000955!6.47e-08!50;UBERON:0006238!6.47e-08!50;UBERON:0002365!9.45e-08!25;UBERON:0002330!9.45e-08!25;UBERON:0002616!1.15e-07!49;UBERON:0000479!2.67e-07!349;UBERON:0000033!4.34e-07!63;UBERON:0000062!6.14e-07!269;UBERON:0002346!8.62e-07!71;UBERON:0003075!8.62e-07!71;UBERON:0007284!8.62e-07!71 | |ontology_enrichment_uberon=UBERON:0004111!1.60e-19!122;UBERON:0000025!5.54e-18!114;UBERON:0001017!1.08e-10!73;UBERON:0005743!1.08e-10!73;UBERON:0005177!1.20e-10!85;UBERON:0000073!6.54e-10!75;UBERON:0001016!6.54e-10!75;UBERON:0000475!1.28e-09!200;UBERON:0004121!1.42e-09!102;UBERON:0000924!1.42e-09!102;UBERON:0006601!1.42e-09!102;UBERON:0002100!1.57e-09!98;UBERON:0000477!1.06e-08!154;UBERON:0001049!4.01e-08!52;UBERON:0005068!4.01e-08!52;UBERON:0006241!4.01e-08!52;UBERON:0007135!4.01e-08!52;UBERON:0000468!4.18e-08!333;UBERON:0003914!4.88e-08!47;UBERON:0000955!6.47e-08!50;UBERON:0006238!6.47e-08!50;UBERON:0002365!9.45e-08!25;UBERON:0002330!9.45e-08!25;UBERON:0002616!1.15e-07!49;UBERON:0000479!2.67e-07!349;UBERON:0000033!4.34e-07!63;UBERON:0000062!6.14e-07!269;UBERON:0002346!8.62e-07!71;UBERON:0003075!8.62e-07!71;UBERON:0007284!8.62e-07!71 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.86e-19,122;UBERON:0000025,7.63e-18,114;UBERON:0001017,3.72e-10,73;UBERON:0001016,2.36e-09,75;UBERON:0005177,5.46e-09,79;UBERON:0002365,7.44e-09,25;UBERON:0002330,7.44e-09,25;UBERON:0000073,1.08e-08,54;UBERON:0003914,2.21e-08,47;UBERON:0002100,5.31e-08,90;UBERON:0001049,5.69e-08,52;UBERON:0005068,5.69e-08,52;UBERON:0006241,5.69e-08,52;UBERON:0007135,5.69e-08,52;UBERON:0004121,1.27e-07,95;UBERON:0000924,1.27e-07,95;UBERON:0006601,1.27e-07,95;UBERON:0002107,2.04e-07,22;UBERON:0007499,2.04e-07,22;UBERON:0006925,2.04e-07,22;UBERON:0009497,2.04e-07,22;UBERON:0000015,2.04e-07,22;UBERON:0002423,2.04e-07,22;UBERON:0006235,2.04e-07,22;UBERON:0008835,2.04e-07,22;UBERON:0003894,2.04e-07,22;UBERON:0004161,2.04e-07,22;UBERON:0008836,2.04e-07,22;UBERON:0010314,4.79e-07,92;UBERON:0000955,8.69e-07,47;UBERON:0006238,8.69e-07,47;UBERON:0009854,9.54e-07,23;UBERON:0009856,9.54e-07,23 | |||
|phase1_expression=1.76163731815273,0.348975407639361,0.454999239389536,3.62957053568196,5.50985302940982,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0.84877930359606,6.12311689087702,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.755380907853464,0.811015449756117,0.367093504323363,5.47673941043627,11.1192829754028,4.61340983742391,7.38833616482277,4.75953833526233,20.125359011096,0,0,0,2.82985379639542,4.58453503902011,5.15672092277442,2.22548106945558,1.5869729378161,2.53532561402472,0.677689064138264,2.66788438833342,0,0,0,1.19840044207362,8.83702102239575,1.14058573539325,0.675029691658453,0.630974884054146,4.28476476605705,3.75476519617743,0.979926393719632,1.82106394934649,0.919218786610021,5.50579404996943,2.80912143787413,3.99376986466233,1.31886287730194,2.10421580285542,1.56274011167028,3.62937898701795,4.50210088025344,2.90316670775939,3.83017161115768,2.98980529678116,1.4911955666024,0.075726193333184,0.377857800533928,2.89864488701678,20.6501730475533,11.5595126730318,19.4293148989614,18.1937396885347,17.0250217096988,7.72444310724635,0,0,0,0.422530259330042,0,0,0,0,0,0,9.93399753555822,0.517875767294343,2.3750742250372,0.867426633830679,1.21786191324856,0.691846491768175,0.904335843315735,1.88141931417128,3.26733137457156,4.94389935468748,6.2177723475562,0.884610551949874,1.45590164952668,1.54589062922275,0.484875253135222,0,2.92780797011547,3.97948742945565,2.29911349687732,0,0,0,3.89455662452539,6.8625090422794,2.1361239859187,2.60736480288415,6.39288643325826,4.36354893575076,2.43361894601636,1.83310854930569,2.36373244159177,3.28539585963777,3.99839526184301,0.260240885925407,0.689706313300419,0.180062129805349,0.60281927134286,0.748401490664606,0.768682321709099,0.655912071918102,2.06962696591213,0,0,0,0.43839146485515,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0,0.703578179943289,0,0.710234206755631,1.18058539048442,1.69693824176116,3.48800917125612,2.68273401399619,7.35621656913168,2.79751744852917,1.64167464079095,4.37771571547621,6.28659945928929,2.85415149878366,10.468100663309,3.15434922846191,2.16099685996497,0.660837565967596,0,0.639864751605702,0,0.38660238396628,1.00841762311671,0,0.570676878337677,0.474529061544512,0.329397909448022,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0.995706366271836,0.569003702859245,0.799739588268102,1.1270773567308,1.22190796707189,1.74557238450863,4.1380133735288,3.09859031908861,8.41377843483732,5.96595165797224,5.18268088471562,8.89357881261447,0,1.17935397067922,1.12431056192427,1.62288097110802,1.4470629585145,2.80088436959562,4.60313819921297,11.6737363278025,1.09824565275233,1.43768206527355,5.20997326735905,2.18426371180192,15.1547326768267,7.53469136792031,25.0870631108951,4.80358294433172,0.189491411770485,0.814824882210129,0.339490171550376,0.234690248288502,2.68010011906905,3.33261097240419,9.95181604074774,1.10344600874334,0.44292937929755,2.23236676120482,5.24362607090362,2.07221978239075,5.78596234326046,0,0,6.88469982226651,4.41498794087572,3.53211297973142,3.98519734413491,0,12.1186045058099,0.94652465824877,0.390438744296638,1.72338718186239,1.91175038362042,1.33679204449436,0.849229592366497,2.42886421004937,1.46127928955656,1.18586333383957,3.21321316421807,1.98716119291576,0.178065603667255,0.488660878060728,2.8044920905331,35.84118735179,0.728341908464944,2.72091201268276,6.03536255218874,5.61073596473468,7.68587869859819,6.20227903603731,3.99887102425256,3.92147116223193,15.485801138855,16.8669773719998,18.5643977846736,4.76615448055303,0,0,0.857348140126369,0.354680467284547,1.96205699362278,3.78462747384878,13.3964577610424,0.23467170806371,0,8.38007912608855,0.98931751764888,1.77610869365496,0.241251699712623,0.238744688006273,0.164140899745061,1.7488850197791,3.15223013417866,0.170870880797853,0.82554747185289,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0,4.77335309007557,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0,0.674321731924103,0.661227645802687,2.35580347785627,0,5.59205381778233,0.56369293868419,0,0.496375471371293,0.194451188344048,0.645799117388655,1.18269287843545,1.05621514781179,0.781226309063701,0.209718688851422,0.483168241652012,1.44015003128933,0,0.405450430580328,0.513554785824136,0.77952493786677,1.07416017400489,0.596044064343795,0.480781798079875,0.443068581523732,0.403865799792591,0.609654453239999,0.201652370273681,0.38983152295901,0.384847366561318,0.584384510907845,3.17422537061296,0,0,0,1.9318959403219,0.93841237725591,1.64836461840539,0.428736758158132,6.01886524842436,2.25900737046827,3.22227665555024,1.71868654031819,2.40594455281163,2.74033007908257,2.2661816921691,2.02506750069542,3.60256962579376,4.98456649882625,1.55328093525546,0.31136204275253,0,0.170733605754134,0.972426868273176,0.419226325255965,1.83843508450014,1.55572709461131,1.64828045791115,2.56735367673452,0.758091635291392,1.77435509923168,1.69763707247469,1.96647165686753,2.04880487695582,1.7230640686684,0.952587382566147,1.85414921511769,2.12200142510076,0.412085900803307,1.32479028120958,1.37147700954166,1.4198064492747,1.90748951957857,1.0174249164263,0.658765662907314,1.52306294205018,1.28049581010941,0.263069711437843,1.62964936615034,0.561142271657738,1.30498519936592,2.06859412988683,1.63692417267876,2.47898945897546,0.771626443924566,0.749431733813838,2.33931608445408,1.50409737833809,7.84282161482258,1.10295709559758,0.927471342481686 | |phase1_expression=1.76163731815273,0.348975407639361,0.454999239389536,3.62957053568196,5.50985302940982,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0.84877930359606,6.12311689087702,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0.755380907853464,0.811015449756117,0.367093504323363,5.47673941043627,11.1192829754028,4.61340983742391,7.38833616482277,4.75953833526233,20.125359011096,0,0,0,2.82985379639542,4.58453503902011,5.15672092277442,2.22548106945558,1.5869729378161,2.53532561402472,0.677689064138264,2.66788438833342,0,0,0,1.19840044207362,8.83702102239575,1.14058573539325,0.675029691658453,0.630974884054146,4.28476476605705,3.75476519617743,0.979926393719632,1.82106394934649,0.919218786610021,5.50579404996943,2.80912143787413,3.99376986466233,1.31886287730194,2.10421580285542,1.56274011167028,3.62937898701795,4.50210088025344,2.90316670775939,3.83017161115768,2.98980529678116,1.4911955666024,0.075726193333184,0.377857800533928,2.89864488701678,20.6501730475533,11.5595126730318,19.4293148989614,18.1937396885347,17.0250217096988,7.72444310724635,0,0,0,0.422530259330042,0,0,0,0,0,0,9.93399753555822,0.517875767294343,2.3750742250372,0.867426633830679,1.21786191324856,0.691846491768175,0.904335843315735,1.88141931417128,3.26733137457156,4.94389935468748,6.2177723475562,0.884610551949874,1.45590164952668,1.54589062922275,0.484875253135222,0,2.92780797011547,3.97948742945565,2.29911349687732,0,0,0,3.89455662452539,6.8625090422794,2.1361239859187,2.60736480288415,6.39288643325826,4.36354893575076,2.43361894601636,1.83310854930569,2.36373244159177,3.28539585963777,3.99839526184301,0.260240885925407,0.689706313300419,0.180062129805349,0.60281927134286,0.748401490664606,0.768682321709099,0.655912071918102,2.06962696591213,0,0,0,0.43839146485515,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0,0.703578179943289,0,0.710234206755631,1.18058539048442,1.69693824176116,3.48800917125612,2.68273401399619,7.35621656913168,2.79751744852917,1.64167464079095,4.37771571547621,6.28659945928929,2.85415149878366,10.468100663309,3.15434922846191,2.16099685996497,0.660837565967596,0,0.639864751605702,0,0.38660238396628,1.00841762311671,0,0.570676878337677,0.474529061544512,0.329397909448022,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0.995706366271836,0.569003702859245,0.799739588268102,1.1270773567308,1.22190796707189,1.74557238450863,4.1380133735288,3.09859031908861,8.41377843483732,5.96595165797224,5.18268088471562,8.89357881261447,0,1.17935397067922,1.12431056192427,1.62288097110802,1.4470629585145,2.80088436959562,4.60313819921297,11.6737363278025,1.09824565275233,1.43768206527355,5.20997326735905,2.18426371180192,15.1547326768267,7.53469136792031,25.0870631108951,4.80358294433172,0.189491411770485,0.814824882210129,0.339490171550376,0.234690248288502,2.68010011906905,3.33261097240419,9.95181604074774,1.10344600874334,0.44292937929755,2.23236676120482,5.24362607090362,2.07221978239075,5.78596234326046,0,0,6.88469982226651,4.41498794087572,3.53211297973142,3.98519734413491,0,12.1186045058099,0.94652465824877,0.390438744296638,1.72338718186239,1.91175038362042,1.33679204449436,0.849229592366497,2.42886421004937,1.46127928955656,1.18586333383957,3.21321316421807,1.98716119291576,0.178065603667255,0.488660878060728,2.8044920905331,35.84118735179,0.728341908464944,2.72091201268276,6.03536255218874,5.61073596473468,7.68587869859819,6.20227903603731,3.99887102425256,3.92147116223193,15.485801138855,16.8669773719998,18.5643977846736,4.76615448055303,0,0,0.857348140126369,0.354680467284547,1.96205699362278,3.78462747384878,13.3964577610424,0.23467170806371,0,8.38007912608855,0.98931751764888,1.77610869365496,0.241251699712623,0.238744688006273,0.164140899745061,1.7488850197791,3.15223013417866,0.170870880797853,0.82554747185289,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0,4.77335309007557,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0,0.674321731924103,0.661227645802687,2.35580347785627,0,5.59205381778233,0.56369293868419,0,0.496375471371293,0.194451188344048,0.645799117388655,1.18269287843545,1.05621514781179,0.781226309063701,0.209718688851422,0.483168241652012,1.44015003128933,0,0.405450430580328,0.513554785824136,0.77952493786677,1.07416017400489,0.596044064343795,0.480781798079875,0.443068581523732,0.403865799792591,0.609654453239999,0.201652370273681,0.38983152295901,0.384847366561318,0.584384510907845,3.17422537061296,0,0,0,1.9318959403219,0.93841237725591,1.64836461840539,0.428736758158132,6.01886524842436,2.25900737046827,3.22227665555024,1.71868654031819,2.40594455281163,2.74033007908257,2.2661816921691,2.02506750069542,3.60256962579376,4.98456649882625,1.55328093525546,0.31136204275253,0,0.170733605754134,0.972426868273176,0.419226325255965,1.83843508450014,1.55572709461131,1.64828045791115,2.56735367673452,0.758091635291392,1.77435509923168,1.69763707247469,1.96647165686753,2.04880487695582,1.7230640686684,0.952587382566147,1.85414921511769,2.12200142510076,0.412085900803307,1.32479028120958,1.37147700954166,1.4198064492747,1.90748951957857,1.0174249164263,0.658765662907314,1.52306294205018,1.28049581010941,0.263069711437843,1.62964936615034,0.561142271657738,1.30498519936592,2.06859412988683,1.63692417267876,2.47898945897546,0.771626443924566,0.749431733813838,2.33931608445408,1.50409737833809,7.84282161482258,1.10295709559758,0.927471342481686 | ||
|short_description=p2@Klf15 | |short_description=p2@Klf15 | ||
}} | }} |
Latest revision as of 21:46, 1 October 2015
Short description: | p2@Klf15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Klf15_5end |
Coexpression cluster: | MCL_coexpression_mm9:3582 |
Association with transcript: | 0bp_to_NM_023184, uc009cxj.1_5end |
EntrezGene: | Klf15 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 2.86e-19 | 122 |
tube | 7.63e-18 | 114 |
central nervous system | 3.72e-10 | 73 |
nervous system | 2.36e-09 | 75 |
trunk region element | 5.46e-09 | 79 |
exocrine gland | 7.44e-09 | 25 |
exocrine system | 7.44e-09 | 25 |
regional part of nervous system | 1.08e-08 | 54 |
epithelial tube | 2.21e-08 | 47 |
trunk | 5.31e-08 | 90 |
neural tube | 5.69e-08 | 52 |
neural rod | 5.69e-08 | 52 |
future spinal cord | 5.69e-08 | 52 |
neural keel | 5.69e-08 | 52 |
ectoderm-derived structure | 1.27e-07 | 95 |
ectoderm | 1.27e-07 | 95 |
presumptive ectoderm | 1.27e-07 | 95 |
liver | 2.04e-07 | 22 |
epithelial sac | 2.04e-07 | 22 |
digestive gland | 2.04e-07 | 22 |
epithelium of foregut-midgut junction | 2.04e-07 | 22 |
anatomical boundary | 2.04e-07 | 22 |
hepatobiliary system | 2.04e-07 | 22 |
foregut-midgut junction | 2.04e-07 | 22 |
hepatic diverticulum | 2.04e-07 | 22 |
liver primordium | 2.04e-07 | 22 |
septum transversum | 2.04e-07 | 22 |
liver bud | 2.04e-07 | 22 |
structure with developmental contribution from neural crest | 4.79e-07 | 92 |
brain | 8.69e-07 | 47 |
future brain | 8.69e-07 | 47 |
digestive tract diverticulum | 9.54e-07 | 23 |
sac | 9.54e-07 | 23 |