FFCP PHASE1:Hg19::chr15:50647347..50647366,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2553 | |EntrezGene=2553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4074 | |HGNC=4074 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000220429,ENST00000429662_5end | |association_with_transcript=0bp_to_ENST00000220429,ENST00000429662_5end | ||
|cluster_id=chr15:50647347..50647366,- | |||
|description=CAGE_peak_3_at_GABPB1_5end | |description=CAGE_peak_3_at_GABPB1_5end | ||
|id=chr15:50647347..50647366,- | |id=chr15:50647347..50647366,- | ||
|ontology_enrichment_celltype=CL:0000037!1.36e-12!172;CL:0000566!1.36e-12!172;CL:0002032!7.88e-12!165;CL:0000837!7.88e-12!165;CL:0000945!1.91e-10!24;CL:0000826!1.91e-10!24;CL:0000738!1.78e-09!140;CL:0000988!2.37e-09!182;CL:0000542!3.75e-09!53;CL:0000051!3.75e-09!53;CL:0002031!3.88e-09!124;CL:0000838!9.79e-09!52;CL:0000236!1.70e-08!14;CL:0002087!1.16e-07!119;CL:0000063!1.60e-07!578;CL:0000134!4.71e-07!358 | |ontology_enrichment_celltype=CL:0000037!1.36e-12!172;CL:0000566!1.36e-12!172;CL:0002032!7.88e-12!165;CL:0000837!7.88e-12!165;CL:0000945!1.91e-10!24;CL:0000826!1.91e-10!24;CL:0000738!1.78e-09!140;CL:0000988!2.37e-09!182;CL:0000542!3.75e-09!53;CL:0000051!3.75e-09!53;CL:0002031!3.88e-09!124;CL:0000838!9.79e-09!52;CL:0000236!1.70e-08!14;CL:0002087!1.16e-07!119;CL:0000063!1.60e-07!578;CL:0000134!4.71e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.68e-10;24!CL:0000236;8.29e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.98e-12,168;CL:0002032,3.28e-11,161;CL:0000837,3.28e-11,161;CL:0000945,1.10e-10,24;CL:0000826,1.10e-10,24;CL:0000988,3.28e-09,177;CL:0000542,4.46e-09,53;CL:0000051,4.46e-09,53;CL:0000738,8.50e-09,136;CL:0000236,1.11e-08,14;CL:0000838,1.18e-08,52;CL:0002031,2.04e-08,120;CL:0000134,5.06e-07,354;CL:0002087,5.18e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.32e-09!235;DOID:14566!6.00e-09!239;DOID:0050686!1.12e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.05e-08,235;DOID:14566,2.71e-08,239;DOID:0050686,2.04e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@GABPB1 | |short_description=p3@GABPB1 | ||
}} | }} |
Latest revision as of 23:40, 17 September 2015
Short description: | p3@GABPB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GABPB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000220429, ENST00000429662_5end |
EntrezGene: | GABPB1 |
HGNC: | 4074 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.98e-12 | 168 |
hematopoietic oligopotent progenitor cell | 3.28e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.28e-11 | 161 |
lymphocyte of B lineage | 1.10e-10 | 24 |
pro-B cell | 1.10e-10 | 24 |
hematopoietic cell | 3.28e-09 | 177 |
lymphocyte | 4.46e-09 | 53 |
common lymphoid progenitor | 4.46e-09 | 53 |
leukocyte | 8.50e-09 | 136 |
B cell | 1.11e-08 | 14 |
lymphoid lineage restricted progenitor cell | 1.18e-08 | 52 |
hematopoietic lineage restricted progenitor cell | 2.04e-08 | 120 |
mesenchymal cell | 5.06e-07 | 354 |
nongranular leukocyte | 5.18e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.05e-08 | 235 |
disease of cellular proliferation | 2.71e-08 | 239 |
organ system cancer | 2.04e-07 | 137 |