FFCP PHASE1:Hg19::chr15:56536304..56536311,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:56536304..56536311,- | |||
|description=CAGE_peak_at_chr15:56536304..56536311,- | |description=CAGE_peak_at_chr15:56536304..56536311,- | ||
|id=chr15:56536304..56536311,- | |id=chr15:56536304..56536311,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;1.46e-50;1!CL:0000557;1.46e-50;1!CL:0002577;9.45e-18;3!CL:0000138;1.44e-09;6!CL:0000153;8.37e-07;9!CL:0000447;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,8.00e-18,3;CL:0000058,1.44e-09,6;CL:0000138,1.44e-09,6;CL:0000153,8.37e-07,9;CL:0000447,8.37e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;3.99e-50;1!DOID:4549;3.99e-50;1!DOID:5861;3.99e-50;1!DOID:6496;3.99e-50;1!DOID:201;1.44e-09;6!DOID:0060100;1.44e-09;6!DOID:1036;1.69e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.99e-50,1;DOID:4549,3.99e-50,1;DOID:5861,3.99e-50,1;DOID:6496,3.99e-50,1;DOID:201,1.44e-09,6;DOID:0060100,1.44e-09,6;DOID:1036,1.80e-07,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;9.45e-18;3!UBERON:0004755;9.45e-18;3!UBERON:0001987;1.13e-13;4!UBERON:0001474;4.31e-12;18!UBERON:0004765;1.07e-08;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,9.46e-18,3;UBERON:0004755,9.46e-18,3;UBERON:0001987,1.00e-13,4;UBERON:0004340,1.00e-13,4;UBERON:0003124,2.03e-08,7 | |||
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|short_description=p@chr15:56536304..56536311,- | |short_description=p@chr15:56536304..56536311,- | ||
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Latest revision as of 02:43, 25 July 2015
Short description: | p@chr15:56536304..56536311, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:56536304..56536311, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 8.00e-18 | 3 |
chondroblast | 1.44e-09 | 6 |
chondrocyte | 1.44e-09 | 6 |
GAG secreting cell | 8.37e-07 | 9 |
carbohydrate secreting cell | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 9.46e-18 | 3 |
skeletal tissue | 9.46e-18 | 3 |
placenta | 1.00e-13 | 4 |
allantois | 1.00e-13 | 4 |
chorion | 2.03e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.99e-50 | 1 |
extraosseous chondrosarcoma | 3.99e-50 | 1 |
myxoid chondrosarcoma | 3.99e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 3.99e-50 | 1 |
connective tissue cancer | 1.44e-09 | 6 |
musculoskeletal system cancer | 1.44e-09 | 6 |
chronic leukemia | 1.80e-07 | 8 |