FFCP PHASE1:Mm9::chr7:36341097..36341108,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110959 | |EntrezGene=110959 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=412 | |||
|TSSclassifier=NA | |||
|UniProt=P11930 | |UniProt=P11930 | ||
|association_with_transcript=-150bp_to_NM_033080,uc009gka.1_5end | |association_with_transcript=-150bp_to_NM_033080,uc009gka.1_5end | ||
|cluster_id=chr7:36341097..36341108,- | |||
|description=CAGE_peak_7_at_Nudt19_5end | |description=CAGE_peak_7_at_Nudt19_5end | ||
|id=chr7:36341097..36341108,- | |id=chr7:36341097..36341108,- | ||
|ontology_enrichment_celltype=CL:0002563!6.73e-10!9;CL:0002251!6.73e-10!9;CL:0000066!3.83e-08!25;CL:0000223!5.52e-07!20 | |ontology_enrichment_celltype=CL:0002563!6.73e-10!9;CL:0002251!6.73e-10!9;CL:0000066!3.83e-08!25;CL:0000223!5.52e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.41e-14,9;CL:0002251,5.41e-14,9;CL:0000066,4.38e-08,25;CL:0000239,4.59e-08,6;CL:0000677,4.59e-08,6;CL:0000584,4.59e-08,6;CL:0002076,7.45e-08,15;CL:0002250,8.08e-08,3;CL:0000223,5.30e-07,20;CL:0000075,7.17e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.98e-21!43;UBERON:0005409!9.68e-18!59;UBERON:0000344!6.41e-16!15;UBERON:0001242!8.06e-14!13;UBERON:0000060!8.06e-14!13;UBERON:0001262!8.06e-14!13;UBERON:0004786!8.06e-14!13;UBERON:0001007!1.31e-11!128;UBERON:0001555!1.31e-11!128;UBERON:0007026!1.31e-11!128;UBERON:0004119!3.47e-11!130;UBERON:0000925!3.47e-11!130;UBERON:0006595!3.47e-11!130;UBERON:0004921!2.23e-10!126;UBERON:0004185!2.23e-10!126;UBERON:0003350!6.73e-10!9;UBERON:0004808!6.73e-10!9;UBERON:0001277!6.73e-10!9;UBERON:0004923!4.22e-08!24;UBERON:0000485!1.22e-07!11;UBERON:0009854!5.59e-07!23;UBERON:0009856!5.59e-07!23 | |ontology_enrichment_uberon=UBERON:0000160!2.98e-21!43;UBERON:0005409!9.68e-18!59;UBERON:0000344!6.41e-16!15;UBERON:0001242!8.06e-14!13;UBERON:0000060!8.06e-14!13;UBERON:0001262!8.06e-14!13;UBERON:0004786!8.06e-14!13;UBERON:0001007!1.31e-11!128;UBERON:0001555!1.31e-11!128;UBERON:0007026!1.31e-11!128;UBERON:0004119!3.47e-11!130;UBERON:0000925!3.47e-11!130;UBERON:0006595!3.47e-11!130;UBERON:0004921!2.23e-10!126;UBERON:0004185!2.23e-10!126;UBERON:0003350!6.73e-10!9;UBERON:0004808!6.73e-10!9;UBERON:0001277!6.73e-10!9;UBERON:0004923!4.22e-08!24;UBERON:0000485!1.22e-07!11;UBERON:0009854!5.59e-07!23;UBERON:0009856!5.59e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.82e-43,31;UBERON:0005409,1.30e-28,47;UBERON:0000344,4.48e-22,15;UBERON:0001242,3.12e-18,13;UBERON:0001262,3.12e-18,13;UBERON:0004786,3.12e-18,13;UBERON:0001007,1.48e-14,116;UBERON:0001555,1.48e-14,116;UBERON:0007026,1.48e-14,116;UBERON:0004119,3.53e-14,118;UBERON:0000925,3.53e-14,118;UBERON:0006595,3.53e-14,118;UBERON:0003350,5.41e-14,9;UBERON:0004808,5.41e-14,9;UBERON:0001277,5.41e-14,9;UBERON:0004923,1.15e-12,24;UBERON:0004921,1.38e-12,114;UBERON:0000485,3.36e-11,11 | |||
|phase1_expression=0,1.04692622291808,1.36499771816861,1.81478526784098,2.00358291978539,1.34303417529512,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,2.07990149631429,2.52350209173887,2.8711598205751,1.29228598847722,0.861884930743556,3.04037471130198,2.26827116783938,0.665191531965914,0,0,0,3.17736781726402,2.1610503896604,2.85837098767317,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0.679971333707751,0,0.649776417447669,0.448026887097336,0.983110940922263,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,2.31293148088659,3.96675849995316,0,0,0.515469845288373,1.00841762311671,1.77902435075896,1.90225626112559,1.42358718463353,2.47048432086016,2.5133520880027,1.98956472041151,2.53453313254856,4.49409704327111,1.29682829924817,2.58883655230677,0,0,0,0.407302655690628,0,0.561086559122548,1.7706230394792,4.42830443938806,2.35498091762062,3.94870924549762,1.77871576252289,0,0,0,0,0.241177159752417,0,0.287696137450811,1.13494658742525,1.64736847912849,0,0.744281895337007,0.312037673114561,1.51547326768267,0.538192240565737,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.269728692769641,0.165306911450672,0,2.46268449254406,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0.505394423527595,0,0.377252682772152,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0,0,0,0 | |phase1_expression=0,1.04692622291808,1.36499771816861,1.81478526784098,2.00358291978539,1.34303417529512,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,2.07990149631429,2.52350209173887,2.8711598205751,1.29228598847722,0.861884930743556,3.04037471130198,2.26827116783938,0.665191531965914,0,0,0,3.17736781726402,2.1610503896604,2.85837098767317,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0.679971333707751,0,0.649776417447669,0.448026887097336,0.983110940922263,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,2.31293148088659,3.96675849995316,0,0,0.515469845288373,1.00841762311671,1.77902435075896,1.90225626112559,1.42358718463353,2.47048432086016,2.5133520880027,1.98956472041151,2.53453313254856,4.49409704327111,1.29682829924817,2.58883655230677,0,0,0,0.407302655690628,0,0.561086559122548,1.7706230394792,4.42830443938806,2.35498091762062,3.94870924549762,1.77871576252289,0,0,0,0,0.241177159752417,0,0.287696137450811,1.13494658742525,1.64736847912849,0,0.744281895337007,0.312037673114561,1.51547326768267,0.538192240565737,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.269728692769641,0.165306911450672,0,2.46268449254406,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0.505394423527595,0,0.377252682772152,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0,0,0,0 | ||
|short_description=p7@Nudt19 | |short_description=p7@Nudt19 | ||
}} | }} |
Latest revision as of 16:52, 26 September 2015
Short description: | p7@Nudt19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Nudt19_5end |
Coexpression cluster: | MCL_coexpression_mm9:412 |
Association with transcript: | -150bp_to_NM_033080, uc009gka.1_5end |
EntrezGene: | Nudt19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.41e-14 | 9 |
epithelial cell of alimentary canal | 5.41e-14 | 9 |
epithelial cell | 4.38e-08 | 25 |
brush border epithelial cell | 4.59e-08 | 6 |
gut absorptive cell | 4.59e-08 | 6 |
enterocyte | 4.59e-08 | 6 |
endo-epithelial cell | 7.45e-08 | 15 |
intestinal crypt stem cell | 8.08e-08 | 3 |
endodermal cell | 5.30e-07 | 20 |
columnar/cuboidal epithelial cell | 7.17e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.82e-43 | 31 |
gastrointestinal system | 1.30e-28 | 47 |
mucosa | 4.48e-22 | 15 |
intestinal mucosa | 3.12e-18 | 13 |
wall of intestine | 3.12e-18 | 13 |
gastrointestinal system mucosa | 3.12e-18 | 13 |
digestive system | 1.48e-14 | 116 |
digestive tract | 1.48e-14 | 116 |
primitive gut | 1.48e-14 | 116 |
endoderm-derived structure | 3.53e-14 | 118 |
endoderm | 3.53e-14 | 118 |
presumptive endoderm | 3.53e-14 | 118 |
epithelium of mucosa | 5.41e-14 | 9 |
gastrointestinal system epithelium | 5.41e-14 | 9 |
intestinal epithelium | 5.41e-14 | 9 |
organ component layer | 1.15e-12 | 24 |
subdivision of digestive tract | 1.38e-12 | 114 |
simple columnar epithelium | 3.36e-11 | 11 |