FFCP PHASE1:Hg19::chr11:2018178..2018183,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283120 | |EntrezGene=283120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001lva.3_5end | |association_with_transcript=0bp_to_uc001lva.3_5end | ||
|cluster_id=chr11:2018178..2018183,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_31_at_H19_5end | |description=CAGE_peak_31_at_H19_5end | ||
|id=chr11:2018178..2018183,- | |id=chr11:2018178..2018183,- | ||
|ontology_enrichment_celltype=CL:0000188!7.90e-09!9 | |ontology_enrichment_celltype=CL:0000188!7.90e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.85e-25;19!CL:0002577;9.40e-12;3!CL:0002541;1.68e-11;3!CL:0002575;1.71e-08;2!CL:0002536;2.27e-08;2!CL:0002537;2.11e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.45e-25,19;CL:0002577,9.09e-12,3;CL:0002541,1.21e-11,3;CL:0002575,1.77e-08,2;CL:0002536,2.20e-08,2;CL:0002537,2.11e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.69e-09;29!UBERON:0008814;9.06e-08;2!UBERON:0010056;9.06e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001557!3.87e-17!19;UBERON:0005631!1.18e-16!14;UBERON:0000158!1.18e-16!14;UBERON:0001737!8.71e-14!9;UBERON:0003124!4.02e-12!7;UBERON:0000478!1.95e-11!24;UBERON:0004923!1.97e-11!57;UBERON:0003688!1.42e-08!6;UBERON:0002358!1.42e-08!6;UBERON:0003684!1.42e-08!6;UBERON:0001178!1.42e-08!6;UBERON:0001987!1.75e-07!4;UBERON:0004340!1.75e-07!4;UBERON:0000072!4.38e-07!46;UBERON:0003104!5.55e-07!238;UBERON:0009142!5.55e-07!238;UBERON:0006562!7.40e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.06e-27;9!UBERON:0001557;2.06e-27;9!UBERON:0005631;1.63e-22;10!UBERON:0000158;1.63e-22;10!UBERON:0000478;1.51e-19;24!UBERON:0000305;2.74e-13;7!UBERON:0003124;1.68e-11;3!UBERON:0000920;1.68e-11;3!UBERON:0001723;5.85e-11;3!UBERON:0001033;5.85e-11;3!UBERON:0001987;6.58e-09;4!UBERON:0005090;4.61e-08;2!UBERON:0001630;4.61e-08;2!UBERON:0005406;4.61e-08;2!UBERON:0001134;6.51e-07;16!UBERON:0002036;6.51e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.03e-30,14;UBERON:0000158,7.03e-30,14;UBERON:0001737,1.17e-27,9;UBERON:0001557,2.78e-22,19;UBERON:0000478,1.25e-19,24;UBERON:0003124,1.80e-18,7;UBERON:0000305,2.68e-13,7;UBERON:0000920,1.21e-11,3;UBERON:0004871,1.38e-11,8;UBERON:0001723,7.07e-11,3;UBERON:0001033,7.07e-11,3;UBERON:0010056,7.07e-11,3;UBERON:0001987,6.42e-09,4;UBERON:0004340,6.42e-09,4;UBERON:0000072,6.86e-09,47;UBERON:0005406,3.88e-08,2;UBERON:0005090,4.16e-08,2;UBERON:0001630,4.16e-08,2;UBERON:0004923,1.85e-07,66;UBERON:0000065,2.16e-07,54 | |||
|phase1_expression=2.18014055124668,0.428201047781966,0.422863212287913,1.0007329835313,2.23480547213644,9.59572376510406,0,0,0,0,1.39560233594486,10.7036272343784,9.75937819445278,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,1.94653948121054,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.756787138224657,2.30470369792,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,1.53798840051797,1.68584690078102,1.44606617930089,1.65440959098591,2.83243277320128,1.89816495288877,2.02246962240247,1.76599318612811,1.15424147083917,0.738155454624648,0,0,4.41026134156626,0,0,0,0,0,0,0,0,0,0.370353780634118,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.4179722426149,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.868687840005475,1.02738161275192,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0,0,0,10.1816601880625,14.0688803762451,0,0,0,10.9125925720653,13.3148351608398,6.35019615992329,0.992431231275107,0.306923946576125,1.12264037773229,0.640695746278505,0.511707249066704,0.321707842287215,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.580024309752732,0.308097234229289,1.84204409671355,0.413509717453592,0.107420244868274,0.145016693914229,0.426133137080504,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0.294747123039363,0,0,0,0,0,0.699869440489966,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.6629723480143,11.5816225524729,35.6306414435109,0,0,0,0,0,0.19924798825107,0,2.01546198283421,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,1.65471377237555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12885164284952,2.06430006651815,32.8571194523877,1.92354946143911,60.2329296901057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.63093176758547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0.677942222341597,0,0,0,0.195551382734803,0,0,29.9714414373195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4008607045578,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07824811396682,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.366857197043358,7.27811696747131,0,0,0,0,0,0,4.7143205006656,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.709618961301111,0,0.171488009437418,0,0,0,0,0,0,1.68163297988273,3.65263488203798,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,1.27016115057279,3.43660302816075,0,0,0,0,0,2.58971534875158,0.205325613712494,2.3196288626764,5.82853191670967,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0.257831551894309,0,0.178553938605658,0,0,0.730336388246517,0,0,0.157771562193185,0,0,2.1161073620616,0,0.462175628631418,2.16313281061895,0,0.109265571963696,0.253397002022874,0,0,0,0,0,0,0,0,1.49263787330687,0.952257725854961,0.0645889098360061,0.124149428591716,0,0,0.808468755832877,1.08858373948481,3.76456631193809,0.134704106029175,0,0.99798106963804,0.162806537221949,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 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|phase1_expression=2.18014055124668,0.428201047781966,0.422863212287913,1.0007329835313,2.23480547213644,9.59572376510406,0,0,0,0,1.39560233594486,10.7036272343784,9.75937819445278,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,1.94653948121054,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.756787138224657,2.30470369792,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,1.53798840051797,1.68584690078102,1.44606617930089,1.65440959098591,2.83243277320128,1.89816495288877,2.02246962240247,1.76599318612811,1.15424147083917,0.738155454624648,0,0,4.41026134156626,0,0,0,0,0,0,0,0,0,0.370353780634118,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.4179722426149,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.868687840005475,1.02738161275192,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0,0,0,10.1816601880625,14.0688803762451,0,0,0,10.9125925720653,13.3148351608398,6.35019615992329,0.992431231275107,0.306923946576125,1.12264037773229,0.640695746278505,0.511707249066704,0.321707842287215,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.580024309752732,0.308097234229289,1.84204409671355,0.413509717453592,0.107420244868274,0.145016693914229,0.426133137080504,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0.294747123039363,0,0,0,0,0,0.699869440489966,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.6629723480143,11.5816225524729,35.6306414435109,0,0,0,0,0,0.19924798825107,0,2.01546198283421,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,1.65471377237555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12885164284952,2.06430006651815,32.8571194523877,1.92354946143911,60.2329296901057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.63093176758547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0.677942222341597,0,0,0,0.195551382734803,0,0,29.9714414373195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4008607045578,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07824811396682,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.366857197043358,7.27811696747131,0,0,0,0,0,0,4.7143205006656,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.709618961301111,0,0.171488009437418,0,0,0,0,0,0,1.68163297988273,3.65263488203798,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,1.27016115057279,3.43660302816075,0,0,0,0,0,2.58971534875158,0.205325613712494,2.3196288626764,5.82853191670967,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0.257831551894309,0,0.178553938605658,0,0,0.730336388246517,0,0,0.157771562193185,0,0,2.1161073620616,0,0.462175628631418,2.16313281061895,0,0.109265571963696,0.253397002022874,0,0,0,0,0,0,0,0,1.49263787330687,0.952257725854961,0.0645889098360061,0.124149428591716,0,0,0.808468755832877,1.08858373948481,3.76456631193809,0.134704106029175,0,0.99798106963804,0.162806537221949,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | ||
|short_description=p31@H19 | |short_description=p31@H19 | ||
}} | }} |
Latest revision as of 06:39, 17 September 2015
Short description: | p31@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 0bp_to_uc001lva.3_5end |
EntrezGene: | H19 |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.45e-25 | 19 |
placental epithelial cell | 9.09e-12 | 3 |
chorionic membrane mesenchymal stem cell | 1.21e-11 | 3 |
central nervous system pericyte | 1.77e-08 | 2 |
amniotic epithelial cell | 2.20e-08 | 2 |
amnion mesenchymal stem cell | 2.11e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.03e-30 | 14 |
membranous layer | 7.03e-30 | 14 |
larynx | 1.17e-27 | 9 |
upper respiratory tract | 2.78e-22 | 19 |
extraembryonic structure | 1.25e-19 | 24 |
chorion | 1.80e-18 | 7 |
amnion | 2.68e-13 | 7 |
egg chorion | 1.21e-11 | 3 |
somatic layer of lateral plate mesoderm | 1.38e-11 | 8 |
tongue | 7.07e-11 | 3 |
gustatory system | 7.07e-11 | 3 |
future tongue | 7.07e-11 | 3 |
placenta | 6.42e-09 | 4 |
allantois | 6.42e-09 | 4 |
segment of respiratory tract | 6.86e-09 | 47 |
perirenal fat | 3.88e-08 | 2 |
muscle structure | 4.16e-08 | 2 |
muscle organ | 4.16e-08 | 2 |
organ component layer | 1.85e-07 | 66 |
respiratory tract | 2.16e-07 | 54 |