FFCP PHASE1:Hg19::chr11:2151877..2151902,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:2151877..2151902,+ | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_at_chr11:2151877..2151902,+ | |description=CAGE_peak_at_chr11:2151877..2151902,+ | ||
|id=chr11:2151877..2151902,+ | |id=chr11:2151877..2151902,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.59e-24;19!CL:0002577;2.14e-12;3!CL:0000182;3.16e-11;12!CL:0002575;2.37e-09;2!CL:0002536;2.63e-09;2!CL:0002537;2.07e-08;5!CL:0002541;8.35e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.73e-24,19;CL:0002577,2.42e-12,3;CL:0000182,3.14e-11,12;CL:0002536,2.14e-09,2;CL:0002575,2.63e-09,2;CL:0002537,2.13e-08,5;CL:0002541,8.13e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.10e-15!14;UBERON:0000158!1.10e-15!14;UBERON:0000478!3.30e-14!24;UBERON:0003124!2.32e-11!7;UBERON:0002200!1.52e-08!11;UBERON:0006876!1.52e-08!11;UBERON:0004923!8.99e-08!57;UBERON:0005284!1.61e-07!5;UBERON:0001987!5.36e-07!4;UBERON:0004340!5.36e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.95e-26;24!UBERON:0005631;2.87e-20;10!UBERON:0000158;2.87e-20;10!UBERON:0001987;8.49e-16;4!UBERON:0000305;3.85e-15;7!UBERON:0002107;7.36e-07;19!UBERON:0006925;7.36e-07;19!UBERON:0003124;8.35e-07;3!UBERON:0000920;8.35e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.60e-33,14;UBERON:0000158,1.60e-33,14;UBERON:0000478,3.79e-26,24;UBERON:0003124,3.53e-20,7;UBERON:0001987,1.44e-15,4;UBERON:0004340,1.44e-15,4;UBERON:0000305,3.44e-15,7;UBERON:0004871,3.00e-13,8;UBERON:0004923,1.41e-07,66;UBERON:0002107,7.33e-07,19;UBERON:0006925,7.33e-07,19;UBERON:0008836,7.33e-07,19;UBERON:0000920,8.13e-07,3 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.893922188854576,0.872338524100369,0,0,0,0,0,2.62129646556207,5.80287352102598,0.495065411840187,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,4.03323147135999,0,0,0,0,0,0,0,0,0,0,2.37600571456411,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,6.50115099244771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,1.18157981336281,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,1.41849132023278,0,0.142977993658148,2.17048642156577,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.47229790062968,2.50085260529839,0.271265023699736,1.66376689224646,0.713715955188647,0.788512075169673,0.234282829985426,0,0,0,0,0,0,2.34961388955289,6.86286847621712,0,0,0,1.21251028578504,1.66435439510497,4.23346410661552,0.248107807818777,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0,3.50492403815704,0,0.0920809889358963,0.459257792658427,0,0.655622074797121,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0.290033387828457,0.0852266274161009,2.40386496246191,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0.762520775695299,0,0,0,0,0.359744915166629,0,0.353437207037059,0,0,0,0,0,0,0.9554993798559,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.491245205065606,0,0,0,0.658589785919804,0,0.349934720244983,0,0,0,0.376575203107117,0.86101074534246,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,10.027268358983,5.64232893582013,19.6582849343509,0,0,0,0,0.422250816255987,0,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,1.84451123510448,0,0,8.93203247249374,0.915975934018623,35.7133299932485,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0.995261931078505,0,0.611030144933625,0.296521128680622,0,0,0.067401132980677,3.21031058919516,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.677942222341597,0,0,0,0.391102765469606,0,0,3.19695375331408,0,0,8.75134489096019,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.201550417460179,0,0,2.59984501613838,1.40106959247983,1.88729922791718,3.24810688998671,0,0,0,0,0,0,0,0,0,0,0,0.314727528809989,0.105600336519406,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0.6124909547064,0.0642292250964595,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,1.06442844195167,0,0,0,0,0,0,0,0,0.560544326627578,1.82631744101899,0,0,0.142953088353313,0,0,1.91244099532837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0.102662806856247,5.799072156691,2.4285549652957,0,1.59160620129095,0,0,0,0,0,1.74847648403166,0,0,0,0,0,1.6906229103336,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0,0,1.5870805215462,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,3.09483760902862,0,0,0,0,1.61693751166575,0,27.7208973879078,0,0,8.64916927019635,0.244209805832924,0,0,0.359300808426348,4.69281884806909,0,1.62758471326295,0,0,0 | |phase1_expression=0.181678379270557,0,0.140954404095971,0,0.893922188854576,0.872338524100369,0,0,0,0,0,2.62129646556207,5.80287352102598,0.495065411840187,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,4.03323147135999,0,0,0,0,0,0,0,0,0,0,2.37600571456411,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,6.50115099244771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,1.18157981336281,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,1.41849132023278,0,0.142977993658148,2.17048642156577,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.47229790062968,2.50085260529839,0.271265023699736,1.66376689224646,0.713715955188647,0.788512075169673,0.234282829985426,0,0,0,0,0,0,2.34961388955289,6.86286847621712,0,0,0,1.21251028578504,1.66435439510497,4.23346410661552,0.248107807818777,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0,3.50492403815704,0,0.0920809889358963,0.459257792658427,0,0.655622074797121,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0.290033387828457,0.0852266274161009,2.40386496246191,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0.762520775695299,0,0,0,0,0.359744915166629,0,0.353437207037059,0,0,0,0,0,0,0.9554993798559,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.491245205065606,0,0,0,0.658589785919804,0,0.349934720244983,0,0,0,0.376575203107117,0.86101074534246,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,10.027268358983,5.64232893582013,19.6582849343509,0,0,0,0,0.422250816255987,0,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,1.84451123510448,0,0,8.93203247249374,0.915975934018623,35.7133299932485,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0.995261931078505,0,0.611030144933625,0.296521128680622,0,0,0.067401132980677,3.21031058919516,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.677942222341597,0,0,0,0.391102765469606,0,0,3.19695375331408,0,0,8.75134489096019,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.201550417460179,0,0,2.59984501613838,1.40106959247983,1.88729922791718,3.24810688998671,0,0,0,0,0,0,0,0,0,0,0,0.314727528809989,0.105600336519406,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0.6124909547064,0.0642292250964595,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,1.06442844195167,0,0,0,0,0,0,0,0,0.560544326627578,1.82631744101899,0,0,0.142953088353313,0,0,1.91244099532837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0.102662806856247,5.799072156691,2.4285549652957,0,1.59160620129095,0,0,0,0,0,1.74847648403166,0,0,0,0,0,1.6906229103336,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0,0,1.5870805215462,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,3.09483760902862,0,0,0,0,1.61693751166575,0,27.7208973879078,0,0,8.64916927019635,0.244209805832924,0,0,0.359300808426348,4.69281884806909,0,1.62758471326295,0,0,0 | ||
|short_description=p@chr11:2151877..2151902,+ | |short_description=p@chr11:2151877..2151902,+ | ||
}} | }} |
Latest revision as of 20:59, 23 July 2015
Short description: | p@chr11:2151877..2151902, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2151877..2151902, + |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.73e-24 | 19 |
placental epithelial cell | 2.42e-12 | 3 |
hepatocyte | 3.14e-11 | 12 |
amniotic epithelial cell | 2.14e-09 | 2 |
central nervous system pericyte | 2.63e-09 | 2 |
amnion mesenchymal stem cell | 2.13e-08 | 5 |
chorionic membrane mesenchymal stem cell | 8.13e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.60e-33 | 14 |
membranous layer | 1.60e-33 | 14 |
extraembryonic structure | 3.79e-26 | 24 |
chorion | 3.53e-20 | 7 |
placenta | 1.44e-15 | 4 |
allantois | 1.44e-15 | 4 |
amnion | 3.44e-15 | 7 |
somatic layer of lateral plate mesoderm | 3.00e-13 | 8 |
organ component layer | 1.41e-07 | 66 |
liver | 7.33e-07 | 19 |
digestive gland | 7.33e-07 | 19 |
liver bud | 7.33e-07 | 19 |
egg chorion | 8.13e-07 | 3 |