FFCP PHASE1:Hg19::chr10:131762558..131762569,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:131762558..131762569,-
|short_description=p5@EBF3
|description=CAGE_peak_5_at_EBF3_5end
|association_with_transcript=-20bp_to_ENST00000471715_5end
|Entre...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=253738 | |EntrezGene=253738 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19087 | |HGNC=19087 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000471715_5end | |||
|cluster_id=chr10:131762558..131762569,- | |||
|description=CAGE_peak_5_at_EBF3_5end | |||
|id=chr10:131762558..131762569,- | |||
|ontology_enrichment_celltype=CL:0000055!4.44e-08!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.17e-08;1!UBERON:0004874;3.32e-08;1 | |||
|ontology_enrichment_disease=DOID:171!1.88e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;7.79e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.99e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007100!6.19e-10!27;UBERON:0000948!4.89e-08!24;UBERON:0005498!4.89e-08!24;UBERON:0004140!4.89e-08!24;UBERON:0009881!4.89e-08!24;UBERON:0004141!4.89e-08!24;UBERON:0003084!4.89e-08!24;UBERON:0007005!4.89e-08!24;UBERON:0004139!4.89e-08!24;UBERON:0004291!4.89e-08!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;3.32e-08;1!UBERON:0000989;3.32e-08;1!UBERON:0007195;3.32e-08;1!UBERON:0008811;3.32e-08;1!UBERON:0002426;3.32e-08;1!UBERON:0003831;3.32e-08;1!UBERON:0003898;3.32e-08;1!UBERON:0004830;3.32e-08;1!UBERON:0003830;3.32e-08;1!UBERON:0005175;3.32e-08;1!UBERON:0001774;3.32e-08;1!UBERON:0001103;3.32e-08;1!UBERON:0002346;8.51e-08;4!UBERON:0000923;8.51e-08;4!UBERON:0010316;8.51e-08;4!UBERON:0005291;8.51e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.52e-08,1;UBERON:0002426,2.17e-08,1;UBERON:0003831,2.17e-08,1;UBERON:0003898,2.17e-08,1;UBERON:0004830,2.17e-08,1;UBERON:0003830,2.17e-08,1;UBERON:0005175,2.17e-08,1;UBERON:0001774,2.17e-08,1;UBERON:0001103,2.17e-08,1;UBERON:0010084,2.17e-08,1;UBERON:0000989,2.33e-08,1;UBERON:0008811,2.33e-08,1;UBERON:0006258,2.33e-08,1;UBERON:0005876,2.33e-08,1;UBERON:0004874,2.33e-08,1;UBERON:0007195,4.11e-08,1 | |||
|phase1_expression=0.363356758541113,0,0,2.00146596706261,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,1.00267582127178,0.579386075843295,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0.775250277507987,0,1.00416183829401,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0.860509862246441,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.538842688278752,0.163461903113459,0.302714855289863,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,2.37600571456411,0.741800787835671,0,0,0,0.500474079487857,0,0,0.30648779579902,0.751190294532984,0.567160915800105,0,0,0.211931901159562,0.600182192168805,0.309157587715317,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0.276149695926898,0.161646056818812,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.537182889719687,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.920771839728375,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0,0.739144404124282,0,0.464841513839837,0.120859449591622,0,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,1.16004861950546,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0.290033387828457,0.426133137080504,0.445160178233687,0,0,0,0,0,0.31481234683064,0,0,0,1.73986598415015,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0,0.808729926293264,0,0.421258456238981,0,0.731140468893853,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.844430541190656,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14117339516596,0.313359791546046,0,0.677167111206413,0.481764225311099,1.61439765752838,0,0,0.307240764308458,0.447352215784832,0.333698283423817,0.586164286206121,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0.311039587661807,0,0,0,0.295930216910801,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0.689486746482929,0,1.04174996959975,0,0,0,0,0,0,0,0.139423744278603,1.15425387755696,0,0,0.179515288819544,0,0,0,0,0,1.09886179476517,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.442287822516696,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0,0.505492637027904,0.751617097072463,0.518440956986236,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0.343972064943233,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0,0,0.144090417154106,0.458146384663663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.916641696046735,0,0.199679000498991,0.858452096273142,0.446342914883745,0.53746777989381,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0.258565912723101,0,0,0,0,0,0,1.9846640872478,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0,0.18628920882415,0.138348634936231,0,0,1.7127920012698,0,0,1.01444720027578,0.298509605773748,0.233713309847224,0,0,0.50313580350515,0,0.228840068396924,0.151230923763239,0.621748802331122,0.73927574994817,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0.400027764663154,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640150378164845,0,0,0.184105950251841,0,0,0.639471856518258,2.47997066212368,0.471797825567689,0.655257829152084,0.33946505990805,1.06287460050841,1.73510069962603,0.558644917973244,0.636008701306837,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0.994581110581374,0.150420656698515,0,0,0.261906694481422,0,0,0,0,0,0,0,0,1.48863353516788,0.527613733078862,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.285906176706625,0.94808167039636,0,1.39086617842064,0.801711364730253,0,0,0,0,0.354996002191696,0.0852134047591577,0,0.22910686854405,0,0,0.894843454382338,0,0,0,0.307988420568741,2.3196288626764,0.485710993059139,0.233939463462106,0.397901550322736,0,0,0.329821550236287,0,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,2.52434499509095,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0.250707539292375,0.378893491091197,0.535928260312357,0,0,0.213233981900981,1.42838658878244,0,0.372448285775147,0,0.190941474834495,0.606351566874658,0.653150243690884,0,0.202056159043763,0.143444410785353,0.665320713092027,0,0,0,0.0898252021065869,2.34640942403454,0.977931553462932,0.406896178315738,0.665756774185513,0,0 | |phase1_expression=0.363356758541113,0,0,2.00146596706261,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,1.00267582127178,0.579386075843295,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0.775250277507987,0,1.00416183829401,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0.860509862246441,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.538842688278752,0.163461903113459,0.302714855289863,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,2.37600571456411,0.741800787835671,0,0,0,0.500474079487857,0,0,0.30648779579902,0.751190294532984,0.567160915800105,0,0,0.211931901159562,0.600182192168805,0.309157587715317,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0.276149695926898,0.161646056818812,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.537182889719687,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.920771839728375,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0,0.739144404124282,0,0.464841513839837,0.120859449591622,0,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,1.16004861950546,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0.290033387828457,0.426133137080504,0.445160178233687,0,0,0,0,0,0.31481234683064,0,0,0,1.73986598415015,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0,0.808729926293264,0,0.421258456238981,0,0.731140468893853,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.844430541190656,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14117339516596,0.313359791546046,0,0.677167111206413,0.481764225311099,1.61439765752838,0,0,0.307240764308458,0.447352215784832,0.333698283423817,0.586164286206121,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0.311039587661807,0,0,0,0.295930216910801,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0.689486746482929,0,1.04174996959975,0,0,0,0,0,0,0,0.139423744278603,1.15425387755696,0,0,0.179515288819544,0,0,0,0,0,1.09886179476517,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.442287822516696,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0,0.505492637027904,0.751617097072463,0.518440956986236,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0.343972064943233,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0,0,0.144090417154106,0.458146384663663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.916641696046735,0,0.199679000498991,0.858452096273142,0.446342914883745,0.53746777989381,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0.258565912723101,0,0,0,0,0,0,1.9846640872478,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0,0.18628920882415,0.138348634936231,0,0,1.7127920012698,0,0,1.01444720027578,0.298509605773748,0.233713309847224,0,0,0.50313580350515,0,0.228840068396924,0.151230923763239,0.621748802331122,0.73927574994817,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0.400027764663154,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640150378164845,0,0,0.184105950251841,0,0,0.639471856518258,2.47997066212368,0.471797825567689,0.655257829152084,0.33946505990805,1.06287460050841,1.73510069962603,0.558644917973244,0.636008701306837,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0.994581110581374,0.150420656698515,0,0,0.261906694481422,0,0,0,0,0,0,0,0,1.48863353516788,0.527613733078862,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.285906176706625,0.94808167039636,0,1.39086617842064,0.801711364730253,0,0,0,0,0.354996002191696,0.0852134047591577,0,0.22910686854405,0,0,0.894843454382338,0,0,0,0.307988420568741,2.3196288626764,0.485710993059139,0.233939463462106,0.397901550322736,0,0,0.329821550236287,0,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,2.52434499509095,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0.250707539292375,0.378893491091197,0.535928260312357,0,0,0.213233981900981,1.42838658878244,0,0.372448285775147,0,0.190941474834495,0.606351566874658,0.653150243690884,0,0.202056159043763,0.143444410785353,0.665320713092027,0,0,0,0.0898252021065869,2.34640942403454,0.977931553462932,0.406896178315738,0.665756774185513,0,0 | ||
|short_description=p5@EBF3 | |||
}} | }} |
Latest revision as of 03:03, 17 September 2015
Short description: | p5@EBF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EBF3_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000471715_5end |
EntrezGene: | EBF3 |
HGNC: | 19087 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 1.52e-08 | 1 |
chest muscle | 2.17e-08 | 1 |
respiratory system muscle | 2.17e-08 | 1 |
skeletal muscle of trunk | 2.17e-08 | 1 |
respiratory system skeletal muscle | 2.17e-08 | 1 |
thoracic segment muscle | 2.17e-08 | 1 |
chest organ | 2.17e-08 | 1 |
muscle of trunk | 2.17e-08 | 1 |
diaphragm | 2.17e-08 | 1 |
future diaphragm | 2.17e-08 | 1 |
penis | 2.33e-08 | 1 |
intromittent organ | 2.33e-08 | 1 |
lateral plate mesenchyme | 2.33e-08 | 1 |
undifferentiated genital tubercle | 2.33e-08 | 1 |
somatopleure | 2.33e-08 | 1 |
stroma of bone marrow | 4.11e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.99e-07 | 10 |