FFCP PHASE1:Hg19::chr11:47206915..47206940,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29763 | |EntrezGene=29763 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8572 | |HGNC=8572 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJ75 | |UniProt=E9PJ75 | ||
|association_with_transcript=29bp_to_ENST00000525725_5end | |association_with_transcript=29bp_to_ENST00000525725_5end | ||
|cluster_id=chr11:47206915..47206940,- | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_3_at_PACSIN3_5end | |description=CAGE_peak_3_at_PACSIN3_5end | ||
|id=chr11:47206915..47206940,- | |id=chr11:47206915..47206940,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.98e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.27e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.95e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.63e-22!115;UBERON:0000153!1.74e-16!129;UBERON:0007811!1.74e-16!129;UBERON:0000033!3.72e-16!123;UBERON:0004121!3.85e-15!169;UBERON:0001049!1.26e-14!57;UBERON:0005068!1.26e-14!57;UBERON:0006241!1.26e-14!57;UBERON:0007135!1.26e-14!57;UBERON:0000924!4.01e-14!173;UBERON:0006601!4.01e-14!173;UBERON:0005743!1.87e-13!86;UBERON:0000481!2.50e-13!347;UBERON:0000475!1.07e-12!365;UBERON:0001017!1.16e-12!82;UBERON:0003075!2.06e-12!86;UBERON:0007284!2.06e-12!86;UBERON:0000073!5.11e-12!94;UBERON:0001016!5.11e-12!94;UBERON:0000955!1.17e-11!69;UBERON:0006238!1.17e-11!69;UBERON:0002616!1.87e-11!59;UBERON:0000062!4.32e-11!511;UBERON:0002346!4.39e-11!90;UBERON:0000468!4.56e-11!659;UBERON:0001893!1.36e-10!34;UBERON:0003080!1.60e-10!42;UBERON:0002020!2.18e-10!34;UBERON:0003528!2.18e-10!34;UBERON:0002780!4.67e-10!41;UBERON:0001890!4.67e-10!41;UBERON:0006240!4.67e-10!41;UBERON:0002791!5.34e-10!33;UBERON:0000922!2.45e-09!612;UBERON:0001869!3.11e-09!32;UBERON:0004111!8.40e-09!241;UBERON:0000064!1.53e-08!219;UBERON:0003056!2.54e-08!61;UBERON:0000467!9.75e-08!625;UBERON:0000477!1.03e-07!286;UBERON:0000480!1.25e-07!626;UBERON:0000923!2.50e-07!604;UBERON:0005291!2.50e-07!604;UBERON:0006598!2.50e-07!604;UBERON:0002532!2.50e-07!604;UBERON:0000483!2.80e-07!309;UBERON:0002050!3.17e-07!605;UBERON:0005423!3.17e-07!605;UBERON:0000119!6.30e-07!312;UBERON:0000161!8.90e-07!35;UBERON:0000165!9.17e-07!28;UBERON:0000930!9.17e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;6.95e-09;24!UBERON:0004151;1.03e-08;3!UBERON:0000341;8.20e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.92e-15,114;UBERON:0000478,7.75e-09,24;UBERON:0004151,1.11e-08,3;UBERON:0003075,2.74e-08,82;UBERON:0007284,2.74e-08,82;UBERON:0010314,7.06e-08,132;UBERON:0001049,7.74e-08,56;UBERON:0005068,7.74e-08,56;UBERON:0006241,7.74e-08,56;UBERON:0007135,7.74e-08,56;UBERON:0002346,1.13e-07,86;UBERON:0004121,2.66e-07,171;UBERON:0000924,2.66e-07,171;UBERON:0006601,2.66e-07,171;UBERON:0010371,5.43e-07,104;UBERON:0003103,8.49e-07,68;UBERON:0000341,8.62e-07,2;UBERON:0011216,9.93e-07,223 | |||
|phase1_expression=0,0,0,0,0.893922188854576,0,0,0,0,0.982935746006035,6.97801167972428,0.436882744260345,2.37390280405608,1.60896258848061,0.662794751455832,0,0,0,0,0,0.204000691244253,0,0.572471974262113,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,1.44846518960824,0,0.973269740605272,0.0945348171640679,0,0,0.261958150995425,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0.25326102332916,0.264818361626438,0,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.737005903870608,0.619954687054593,0,0.247266929278557,0,0,0.336672227908132,0.625592599359821,0.277064115484183,1.75591048352335,0,0,0,0.179389635688862,0.427114777637135,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0,0.508681776931463,0.193260853163297,0.545492241181669,1.14721838155602,0.487894824518382,0.795178609928912,1.16193942869518,0.518305275076852,1.00928340350251,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,2.95172252503473,0.171567810298526,0.658501712451753,0,0.100528972411631,0.648119116109707,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,3.7983512377401,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,1.19812427745791,3.44585807502342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,2.00068208423871,0,0.415941723061614,0.356857977594324,0.157702415033935,0.234282829985426,0.902838299183157,0,1.03473071292505,0,0.737476674166813,0.260650843404249,0.979005787313703,0,0,0,0,0,3.32870879020994,2.41912234663744,0,0,0,0,0.511707249066704,0.804269605718038,0,0,0,0.0821271560138091,0,0,0.362578348774867,1.00253235151642,0.460404944679482,0.114814448164607,0,0.131124414959424,0,0.462092022626489,0.784349769176855,0,0.211103257785751,0,0,0,0,0.812839312631559,0,0,0,0.223874754722178,0,0,0.512900250232778,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0,0,0.644521469209642,0.870100163485371,0,0,0.165284915360978,0.384380134730212,0.255225424989168,0.10115778085555,0,0.94443704049192,0.6970372701606,0,0.532306030317022,0,0,0.715624433709956,0.372158369359667,0,0,1.02359116524534,0,0,0,0,0.54907405947211,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0.66343897524122,0,1.73632660280006,0,0,0,0,0.143411352204052,0.294747123039363,0,0,0.211107635297664,0,0.379473173765715,0,0.192444225451024,1.34060455107157,0,0.0941438007767792,0,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0.747768497892312,1.92495971052672,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,2.3874448473769,0,1.22864280839693,0,0.281338832821026,0,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0.269605053441981,0,0,0.789147245095469,0,0,1.93866549219044,1.48428957058962,0,1.04171104434093,0.0874599999961957,0.724999575434793,0.1137934482855,0,0.236387681767936,0,0,0,0.885741385813839,0.844175070377856,0,0.221158519862449,0.591095237907095,0.438770794307945,0,0,0.0769502585037971,0,0,0.179515288819544,0,0.957003479195758,0.366390373607449,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0.176915129006678,0,0,0,0,2.76344645220776,14.4463976513782,1.40558667435203,0,0.19566461893209,0,0,0,0.30607276163049,0.31593289814244,0,0.103688191397247,0,0.330991955875499,0,0,0,0.138674673013139,0.173559738335131,0.293977192243133,0,0.17472666824203,0,0.0967563312890851,0.292357268344742,0.0821154570532092,0.969890164884194,0,1.58186518546373,0,0,1.01297273529406,0.586654148204409,0.160317640503067,0.426905989478705,0,0,0,0.171594997861965,0,0.49701014226173,0.471388069233591,0,0,0.101998217636322,0.577901179803038,0,1.64286454670392,0,0,0,0.558564802544508,4.12488763221031,2.15361907373044,1.19807400299395,1.71690419254628,2.67805748930247,3.89664140423012,0.720599767084807,0,2.20592910460226,1.40106959247983,2.35912403489647,0,0,0,0.544813624446302,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0.364497339948148,0,0,0,0,0,0,2.85878130549347,3.31045985182716,0.25426853765475,1.08599920350743,0.864221491201268,1.95952416065645,0,0,0.681552087141687,0,0.58620893471233,1.32506888912221,0.646414781807753,1.45455861916959,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,1.001527445652,0.573409195690071,1.22021956690538,1.4903136705932,0.276697269872462,0.37494122388632,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0.151230923763239,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0.168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| ||
|short_description=p3@PACSIN3 | |short_description=p3@PACSIN3 | ||
}} | }} |
Latest revision as of 04:00, 18 September 2015
Short description: | p3@PACSIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PACSIN3_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 29bp_to_ENST00000525725_5end |
EntrezGene: | PACSIN3 |
HGNC: | 8572 |
UniProt: | E9PJ75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.27e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.92e-15 | 114 |
extraembryonic structure | 7.75e-09 | 24 |
cardiac chamber | 1.11e-08 | 3 |
neural plate | 2.74e-08 | 82 |
presumptive neural plate | 2.74e-08 | 82 |
structure with developmental contribution from neural crest | 7.06e-08 | 132 |
neural tube | 7.74e-08 | 56 |
neural rod | 7.74e-08 | 56 |
future spinal cord | 7.74e-08 | 56 |
neural keel | 7.74e-08 | 56 |
neurectoderm | 1.13e-07 | 86 |
ectoderm-derived structure | 2.66e-07 | 171 |
ectoderm | 2.66e-07 | 171 |
presumptive ectoderm | 2.66e-07 | 171 |
ecto-epithelium | 5.43e-07 | 104 |
compound organ | 8.49e-07 | 68 |
throat | 8.62e-07 | 2 |
organ system subdivision | 9.93e-07 | 223 |