FFCP PHASE1:Hg19::chr10:19337718..19337744,+: Difference between revisions
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|id=chr10:19337718..19337744,+
|short_description=p@chr10:19337718..19337744,+
|description=CAGE_peak_at_chr10:19337718..19337744,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:19337718..19337744,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr10:19337718..19337744,+ | |||
|id=chr10:19337718..19337744,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.83e-11!4;CL:0002322!1.04e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002563;2.74e-16;4!CL:0002253;6.94e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.64e-16,4;CL:0002253,6.94e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.30e-34!27;UBERON:0005409!3.08e-32!35;UBERON:0000059!3.35e-32!11;UBERON:0001155!1.52e-27!9;UBERON:0004907!1.57e-18!5;UBERON:0004921!4.49e-15!129;UBERON:0004185!4.49e-15!129;UBERON:0001007!3.58e-12!155;UBERON:0001555!3.58e-12!155;UBERON:0007026!3.58e-12!155;UBERON:0001242!3.83e-11!4;UBERON:0001262!3.83e-11!4;UBERON:0004786!3.83e-11!4;UBERON:0004808!3.83e-11!4;UBERON:0001277!3.83e-11!4;UBERON:0001154!4.01e-11!1;UBERON:0001153!4.01e-11!1;UBERON:0001052!4.92e-11!4;UBERON:0004119!5.64e-11!169;UBERON:0000925!5.64e-11!169;UBERON:0006595!5.64e-11!169;UBERON:0003350!4.32e-09!5;UBERON:0001046!1.12e-08!19;UBERON:0002108!9.34e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;9.25e-54;17!UBERON:0005409;6.40e-53;22!UBERON:0004921;1.20e-31;33!UBERON:0002108;1.14e-28;4!UBERON:0000059;2.16e-22;11!UBERON:0001242;2.74e-16;4!UBERON:0001262;2.74e-16;4!UBERON:0004786;2.74e-16;4!UBERON:0004808;2.74e-16;4!UBERON:0001277;2.74e-16;4!UBERON:0001052;3.87e-16;4!UBERON:0001155;7.96e-16;9!UBERON:0004907;4.13e-13;5!UBERON:0001555;6.68e-13;54!UBERON:0000485;1.02e-09;7!UBERON:0003929;1.02e-09;7!UBERON:0001007;4.71e-09;81!UBERON:0003350;1.29e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.58e-54,17;UBERON:0005409,9.11e-47,25;UBERON:0002108,1.20e-28,4;UBERON:0000059,2.22e-22,11;UBERON:0001242,2.64e-16,4;UBERON:0001262,2.64e-16,4;UBERON:0004786,2.64e-16,4;UBERON:0004808,2.64e-16,4;UBERON:0001277,2.64e-16,4;UBERON:0001052,3.87e-16,4;UBERON:0001155,8.16e-16,9;UBERON:0004921,1.46e-14,118;UBERON:0004907,4.13e-13,5;UBERON:0001007,1.12e-11,145;UBERON:0001555,1.12e-11,145;UBERON:0007026,1.12e-11,145;UBERON:0004119,1.73e-10,160;UBERON:0000925,1.73e-10,160;UBERON:0006595,1.73e-10,160;UBERON:0003350,1.26e-08,8;UBERON:0011216,1.30e-08,223;UBERON:0001046,7.81e-08,19;UBERON:0000485,9.20e-08,9 | |||
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|short_description=p@chr10:19337718..19337744,+ | |||
}} | }} |
Latest revision as of 12:26, 23 July 2015
Short description: | p@chr10:19337718..19337744, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:19337718..19337744, + |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.64e-16 | 4 |
epithelial cell of large intestine | 6.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.58e-54 | 17 |
gastrointestinal system | 9.11e-47 | 25 |
small intestine | 1.20e-28 | 4 |
large intestine | 2.22e-22 | 11 |
intestinal mucosa | 2.64e-16 | 4 |
wall of intestine | 2.64e-16 | 4 |
gastrointestinal system mucosa | 2.64e-16 | 4 |
gastrointestinal system epithelium | 2.64e-16 | 4 |
intestinal epithelium | 2.64e-16 | 4 |
rectum | 3.87e-16 | 4 |
colon | 8.16e-16 | 9 |
subdivision of digestive tract | 1.46e-14 | 118 |
lower digestive tract | 4.13e-13 | 5 |
digestive system | 1.12e-11 | 145 |
digestive tract | 1.12e-11 | 145 |
primitive gut | 1.12e-11 | 145 |
endoderm-derived structure | 1.73e-10 | 160 |
endoderm | 1.73e-10 | 160 |
presumptive endoderm | 1.73e-10 | 160 |
epithelium of mucosa | 1.26e-08 | 8 |
organ system subdivision | 1.30e-08 | 223 |
hindgut | 7.81e-08 | 19 |
simple columnar epithelium | 9.20e-08 | 9 |