FFCP PHASE1:Hg19::chr11:60048089..60048100,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51338 | |EntrezGene=51338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13371 | |HGNC=13371 | ||
|TSSclassifier=strong | |||
|UniProt=F8W866 | |UniProt=F8W866 | ||
|association_with_transcript=-28bp_to_ENST00000343968,ENST00000355131_5end | |association_with_transcript=-28bp_to_ENST00000343968,ENST00000355131_5end | ||
|cluster_id=chr11:60048089..60048100,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_3_at_MS4A4A_5end | |description=CAGE_peak_3_at_MS4A4A_5end | ||
|id=chr11:60048089..60048100,+ | |id=chr11:60048089..60048100,+ | ||
|ontology_enrichment_celltype=CL:0002194!2.07e-21!63;CL:0000576!2.07e-21!63;CL:0000040!2.07e-21!63;CL:0000559!2.07e-21!63;CL:0002009!2.24e-20!65;CL:0000839!4.07e-19!70;CL:0000557!1.13e-18!71;CL:0000766!1.18e-17!76;CL:0002057!4.07e-15!42;CL:0000860!1.45e-13!45;CL:0000763!2.60e-08!112;CL:0000049!2.60e-08!112;CL:0002087!3.54e-07!119 | |ontology_enrichment_celltype=CL:0002194!2.07e-21!63;CL:0000576!2.07e-21!63;CL:0000040!2.07e-21!63;CL:0000559!2.07e-21!63;CL:0002009!2.24e-20!65;CL:0000839!4.07e-19!70;CL:0000557!1.13e-18!71;CL:0000766!1.18e-17!76;CL:0002057!4.07e-15!42;CL:0000860!1.45e-13!45;CL:0000763!2.60e-08!112;CL:0000049!2.60e-08!112;CL:0002087!3.54e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000235;2.28e-12;6!CL:0002619;8.26e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.35e-12,6;CL:0002619,8.31e-10,3;CL:0002194,8.70e-09,59;CL:0000576,8.70e-09,59;CL:0000040,8.70e-09,59;CL:0000559,8.70e-09,59;CL:0002009,2.27e-08,61;CL:0000839,1.92e-07,66;CL:0000557,2.82e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.75e-13;7!UBERON:0006603;4.92e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.56e-71!115;UBERON:0001049!1.57e-21!57;UBERON:0005068!1.57e-21!57;UBERON:0006241!1.57e-21!57;UBERON:0007135!1.57e-21!57;UBERON:0000062!1.19e-19!511;UBERON:0002616!8.16e-18!59;UBERON:0003080!1.26e-17!42;UBERON:0002780!1.55e-16!41;UBERON:0001890!1.55e-16!41;UBERON:0006240!1.55e-16!41;UBERON:0003075!2.00e-16!86;UBERON:0007284!2.00e-16!86;UBERON:0002371!4.40e-16!80;UBERON:0002390!4.42e-16!102;UBERON:0003061!4.42e-16!102;UBERON:0002193!3.92e-15!112;UBERON:0002346!3.96e-15!90;UBERON:0002405!1.15e-14!115;UBERON:0000955!2.54e-14!69;UBERON:0006238!2.54e-14!69;UBERON:0001474!4.03e-14!86;UBERON:0001017!5.10e-14!82;UBERON:0005743!7.59e-14!86;UBERON:0000468!1.11e-12!659;UBERON:0000467!3.16e-12!625;UBERON:0000480!3.82e-12!626;UBERON:0000073!1.83e-11!94;UBERON:0001016!1.83e-11!94;UBERON:0000922!5.23e-11!612;UBERON:0002020!5.82e-11!34;UBERON:0003528!5.82e-11!34;UBERON:0004765!5.89e-11!101;UBERON:0001434!5.89e-11!101;UBERON:0001893!1.20e-10!34;UBERON:0003056!1.33e-10!61;UBERON:0002050!1.71e-10!605;UBERON:0005423!1.71e-10!605;UBERON:0002791!4.19e-10!33;UBERON:0000923!5.36e-10!604;UBERON:0005291!5.36e-10!604;UBERON:0006598!5.36e-10!604;UBERON:0002532!5.36e-10!604;UBERON:0002298!8.81e-10!8;UBERON:0001869!3.51e-09!32;UBERON:0001894!7.05e-09!7;UBERON:0006222!7.05e-09!7;UBERON:0000153!2.54e-08!129;UBERON:0007811!2.54e-08!129;UBERON:0001950!3.57e-08!20;UBERON:0002308!1.41e-07!9;UBERON:0000125!1.41e-07!9;UBERON:0003081!3.26e-07!216;UBERON:0002619!3.63e-07!22;UBERON:0000479!4.21e-07!787;UBERON:0000033!7.68e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!1.56e-71!115;UBERON:0001049!1.57e-21!57;UBERON:0005068!1.57e-21!57;UBERON:0006241!1.57e-21!57;UBERON:0007135!1.57e-21!57;UBERON:0000062!1.19e-19!511;UBERON:0002616!8.16e-18!59;UBERON:0003080!1.26e-17!42;UBERON:0002780!1.55e-16!41;UBERON:0001890!1.55e-16!41;UBERON:0006240!1.55e-16!41;UBERON:0003075!2.00e-16!86;UBERON:0007284!2.00e-16!86;UBERON:0002371!4.40e-16!80;UBERON:0002390!4.42e-16!102;UBERON:0003061!4.42e-16!102;UBERON:0002193!3.92e-15!112;UBERON:0002346!3.96e-15!90;UBERON:0002405!1.15e-14!115;UBERON:0000955!2.54e-14!69;UBERON:0006238!2.54e-14!69;UBERON:0001474!4.03e-14!86;UBERON:0001017!5.10e-14!82;UBERON:0005743!7.59e-14!86;UBERON:0000468!1.11e-12!659;UBERON:0000467!3.16e-12!625;UBERON:0000480!3.82e-12!626;UBERON:0000073!1.83e-11!94;UBERON:0001016!1.83e-11!94;UBERON:0000922!5.23e-11!612;UBERON:0002020!5.82e-11!34;UBERON:0003528!5.82e-11!34;UBERON:0004765!5.89e-11!101;UBERON:0001434!5.89e-11!101;UBERON:0001893!1.20e-10!34;UBERON:0003056!1.33e-10!61;UBERON:0002050!1.71e-10!605;UBERON:0005423!1.71e-10!605;UBERON:0002791!4.19e-10!33;UBERON:0000923!5.36e-10!604;UBERON:0005291!5.36e-10!604;UBERON:0006598!5.36e-10!604;UBERON:0002532!5.36e-10!604;UBERON:0002298!8.81e-10!8;UBERON:0001869!3.51e-09!32;UBERON:0001894!7.05e-09!7;UBERON:0006222!7.05e-09!7;UBERON:0000153!2.54e-08!129;UBERON:0007811!2.54e-08!129;UBERON:0001950!3.57e-08!20;UBERON:0002308!1.41e-07!9;UBERON:0000125!1.41e-07!9;UBERON:0003081!3.26e-07!216;UBERON:0002619!3.63e-07!22;UBERON:0000479!4.21e-07!787;UBERON:0000033!7.68e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.23e-11;114!UBERON:0004151;1.65e-08;3!UBERON:0003978;2.42e-08;3!UBERON:0000946;2.42e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.37e-41,114;UBERON:0004151,1.66e-08,3;UBERON:0003978,4.36e-08,3;UBERON:0009751,4.36e-08,3;UBERON:0000946,4.36e-08,3;UBERON:0002523,4.36e-08,3;UBERON:0005983,4.36e-08,3;UBERON:0002165,4.36e-08,3;UBERON:0002062,4.36e-08,3;UBERON:0007280,4.36e-08,3;UBERON:0002405,2.19e-07,93 | |||
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|short_description=p3@MS4A4A | |short_description=p3@MS4A4A | ||
}} | }} |
Latest revision as of 13:24, 18 September 2015
Short description: | p3@MS4A4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MS4A4A_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | -28bp_to_ENST00000343968, ENST00000355131_5end |
EntrezGene: | MS4A4A |
HGNC: | 13371 |
UniProt: | F8W866 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.35e-12 | 6 |
adult endothelial progenitor cell | 8.31e-10 | 3 |
monopoietic cell | 8.70e-09 | 59 |
monocyte | 8.70e-09 | 59 |
monoblast | 8.70e-09 | 59 |
promonocyte | 8.70e-09 | 59 |
macrophage dendritic cell progenitor | 2.27e-08 | 61 |
myeloid lineage restricted progenitor cell | 1.92e-07 | 66 |
granulocyte monocyte progenitor cell | 2.82e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.37e-41 | 114 |
cardiac chamber | 1.66e-08 | 3 |
valve | 4.36e-08 | 3 |
cardiac mesenchyme | 4.36e-08 | 3 |
cardial valve | 4.36e-08 | 3 |
tunica intima | 4.36e-08 | 3 |
heart layer | 4.36e-08 | 3 |
endocardium | 4.36e-08 | 3 |
endocardial cushion | 4.36e-08 | 3 |
presumptive endocardium | 4.36e-08 | 3 |
immune system | 2.19e-07 | 93 |