FFCP PHASE1:Hg19::chr16:58535405..58535409,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=252bp_to_AK126733_5end | |association_with_transcript=252bp_to_AK126733_5end | ||
|cluster_id=chr16:58535405..58535409,+ | |||
|description=CAGE_peak_1_at_AK126733_5end | |description=CAGE_peak_1_at_AK126733_5end | ||
|id=chr16:58535405..58535409,+ | |id=chr16:58535405..58535409,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.54e-10!5;CL:0000039!6.60e-10!7;CL:0000586!6.60e-10!7 | |ontology_enrichment_celltype=CL:0002322!1.54e-10!5;CL:0000039!6.60e-10!7;CL:0000586!6.60e-10!7 | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.61e-08;6!CL:0000404;2.61e-08;6!CL:0000047;7.82e-07;2!CL:0002535;7.82e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.83e-13,8;CL:0000540,1.55e-08,6;CL:0000031,1.55e-08,6;CL:0000404,1.55e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.61e-08;6 | |||
|ontology_enrichment_disease=DOID:3095!8.05e-07!22;DOID:2994!8.05e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3371;2.07e-12;1!DOID:4549;2.07e-12;1!DOID:5861;2.07e-12;1!DOID:6496;2.07e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.46e-12,1;DOID:4549,2.46e-12,1;DOID:5861,2.46e-12,1;DOID:6496,2.46e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.31e-47!57;UBERON:0005068!1.31e-47!57;UBERON:0006241!1.31e-47!57;UBERON:0007135!1.31e-47!57;UBERON:0001017!5.34e-45!82;UBERON:0005743!4.28e-44!86;UBERON:0000073!4.59e-42!94;UBERON:0001016!4.59e-42!94;UBERON:0002616!1.21e-38!59;UBERON:0002780!2.95e-37!41;UBERON:0001890!2.95e-37!41;UBERON:0006240!2.95e-37!41;UBERON:0003080!3.71e-36!42;UBERON:0000955!8.29e-35!69;UBERON:0006238!8.29e-35!69;UBERON:0002020!2.69e-31!34;UBERON:0003528!2.69e-31!34;UBERON:0001869!4.68e-31!32;UBERON:0003075!1.00e-30!86;UBERON:0007284!1.00e-30!86;UBERON:0002619!1.40e-30!22;UBERON:0000956!6.86e-29!25;UBERON:0000203!6.86e-29!25;UBERON:0001893!7.90e-29!34;UBERON:0002346!8.63e-29!90;UBERON:0001950!2.51e-27!20;UBERON:0002791!4.10e-27!33;UBERON:0007023!5.74e-24!115;UBERON:0003056!1.22e-23!61;UBERON:0004121!6.56e-20!169;UBERON:0000924!4.19e-19!173;UBERON:0006601!4.19e-19!173;UBERON:0000033!1.45e-16!123;UBERON:0000153!3.00e-16!129;UBERON:0007811!3.00e-16!129;UBERON:0000025!6.43e-14!194;UBERON:0000200!2.43e-12!6;UBERON:0003076!3.07e-12!15;UBERON:0003057!3.07e-12!15;UBERON:0001871!1.28e-11!7;UBERON:0000349!3.49e-10!5;UBERON:0001894!5.10e-10!7;UBERON:0006222!5.10e-10!7;UBERON:0004111!1.12e-09!241;UBERON:0000483!6.39e-09!309;UBERON:0000119!1.09e-08!312;UBERON:0004733!2.51e-08!12;UBERON:0002028!2.51e-08!12;UBERON:0007277!2.51e-08!12;UBERON:0000473!3.59e-08!8;UBERON:0004732!1.41e-07!13;UBERON:0003135!1.62e-07!11;UBERON:0000477!4.16e-07!286;UBERON:0002680!6.15e-07!9;UBERON:0001895!6.15e-07!9;UBERON:0010092!6.15e-07!9;UBERON:0001872!6.25e-07!5;UBERON:0002021!9.73e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002581;2.07e-12;1!UBERON:0007190;2.07e-12;1!UBERON:0000200;2.61e-08;6!UBERON:0001894;2.29e-07;7!UBERON:0002780;3.59e-07;41!UBERON:0001890;3.59e-07;41!UBERON:0001897;4.68e-07;2!UBERON:0001954;4.68e-07;2!UBERON:0003022;4.68e-07;2!UBERON:0002421;4.68e-07;2!UBERON:0010225;4.68e-07;2!UBERON:0002600;4.68e-07;2!UBERON:0000007;7.82e-07;2!UBERON:0002360;7.82e-07;2!UBERON:0000094;7.82e-07;2!UBERON:0006955;7.82e-07;2!UBERON:0004801;7.82e-07;2!UBERON:0010743;7.82e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007190,2.75e-12,1;UBERON:0002581,4.31e-12,1;UBERON:0001017,4.71e-12,81;UBERON:0001016,9.63e-11,89;UBERON:0002780,3.79e-09,41;UBERON:0001890,3.79e-09,41;UBERON:0003080,3.79e-09,41;UBERON:0006240,3.79e-09,41;UBERON:0000200,3.63e-08,6;UBERON:0001894,2.52e-07,7;UBERON:0006222,2.52e-07,7;UBERON:0001897,4.56e-07,2;UBERON:0010225,4.56e-07,2;UBERON:0001954,4.83e-07,2;UBERON:0003022,4.83e-07,2;UBERON:0002421,4.83e-07,2;UBERON:0002600,4.83e-07,2;UBERON:0000073,5.05e-07,53;UBERON:0002616,5.05e-07,53;UBERON:0000007,9.54e-07,2 | |||
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| ||
|short_description=p1@AK126733 | |short_description=p1@AK126733 | ||
}} | }} |
Latest revision as of 06:09, 17 September 2015
Short description: | p1@AK126733 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK126733_5end |
Coexpression cluster: | NA |
Association with transcript: | 252bp_to_AK126733_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.83e-13 | 8 |
neuron | 1.55e-08 | 6 |
neuroblast | 1.55e-08 | 6 |
electrically signaling cell | 1.55e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
paracentral gyrus | 2.75e-12 | 1 |
postcentral gyrus | 4.31e-12 | 1 |
central nervous system | 4.71e-12 | 81 |
nervous system | 9.63e-11 | 89 |
regional part of forebrain | 3.79e-09 | 41 |
forebrain | 3.79e-09 | 41 |
anterior neural tube | 3.79e-09 | 41 |
future forebrain | 3.79e-09 | 41 |
gyrus | 3.63e-08 | 6 |
diencephalon | 2.52e-07 | 7 |
future diencephalon | 2.52e-07 | 7 |
dorsal plus ventral thalamus | 4.56e-07 | 2 |
thalamic complex | 4.56e-07 | 2 |
Ammon's horn | 4.83e-07 | 2 |
lobe parts of cerebral cortex | 4.83e-07 | 2 |
hippocampal formation | 4.83e-07 | 2 |
limbic lobe | 4.83e-07 | 2 |
regional part of nervous system | 5.05e-07 | 53 |
regional part of brain | 5.05e-07 | 53 |
pituitary gland | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.46e-12 | 1 |
extraosseous chondrosarcoma | 2.46e-12 | 1 |
myxoid chondrosarcoma | 2.46e-12 | 1 |
extraskeletal myxoid chondrosarcoma | 2.46e-12 | 1 |