FFCP PHASE1:Hg19::chr12:105380525..105380559,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:105380525..105380559,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_at_chr12:105380525..105380559,- | |description=CAGE_peak_at_chr12:105380525..105380559,- | ||
|id=chr12:105380525..105380559,- | |id=chr12:105380525..105380559,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000784;2.33e-118;3!CL:0000451;3.85e-33;10!CL:0000306;3.79e-11;4!CL:0002222;3.79e-11;4!CL:0002224;3.79e-11;4!CL:0000840;5.54e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.33e-118,3;CL:0000451,3.85e-33,10;CL:0000306,3.79e-11,4;CL:0002222,3.79e-11,4;CL:0002224,3.79e-11,4;CL:0000840,5.54e-08,5;CL:0001029,5.54e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;3.79e-11;4!UBERON:0005389;3.79e-11;4!UBERON:0000484;3.79e-11;4!UBERON:0000965;3.79e-11;4!UBERON:0001803;3.79e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,3.79e-11,4;UBERON:0005389,3.79e-11,4;UBERON:0000484,3.79e-11,4;UBERON:0002546,3.79e-11,4;UBERON:0000965,3.79e-11,4;UBERON:0001803,3.79e-11,4;UBERON:0003073,3.79e-11,4;UBERON:0005426,3.79e-11,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0.602694528023977,0,0,0.246242116153576,0,0.313454721478088,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0,0.649094787309367,0.696518949197069,0.664789802594326,8.10868122638163,6.86393892936153,4.45749001595478,0,0,0.694281003215189,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0.339121184620975,0,0,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0.213455115606889,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0.120859449591622,0,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,0,0.539617372749944,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844501632511974,0,0,0.251932747854276,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0.432777279484182,0,0,0,0.296521128680622,0,0,0,0,0,0,0.586993856796269,0,0,0,0.30607276163049,0.063186579628488,3.15679180770434,0.311064574191741,0,0,0.941798755221676,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0.19351266257817,0.292357268344742,0.328461828212837,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0,0.160753148465019,0.412618309791701,0,0.449947783103001,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,1.19730191562487,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0.336749488765919,0,0,0,0.260994291965212,0.226705925512272,0,0.244736704506468,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0.107824811396682,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0,0.762764190934334,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.147856086217045,0,0,0.206686796501184,0,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0.701818390386317,0.198950775161368,0.118920090777569,0,0,0,0,0,0.940634592723046,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0.18378979906969,0.250707539292375,0.227336094654718,0,0,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0.224263725161227,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0.602694528023977,0,0,0.246242116153576,0,0.313454721478088,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0,0.649094787309367,0.696518949197069,0.664789802594326,8.10868122638163,6.86393892936153,4.45749001595478,0,0,0.694281003215189,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0.339121184620975,0,0,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0.213455115606889,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0.120859449591622,0,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,0,0.539617372749944,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844501632511974,0,0,0.251932747854276,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0.432777279484182,0,0,0,0.296521128680622,0,0,0,0,0,0,0.586993856796269,0,0,0,0.30607276163049,0.063186579628488,3.15679180770434,0.311064574191741,0,0,0.941798755221676,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0.19351266257817,0.292357268344742,0.328461828212837,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0,0.160753148465019,0.412618309791701,0,0.449947783103001,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,1.19730191562487,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0.336749488765919,0,0,0,0.260994291965212,0.226705925512272,0,0.244736704506468,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0.107824811396682,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0,0.762764190934334,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.147856086217045,0,0,0.206686796501184,0,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0.701818390386317,0.198950775161368,0.118920090777569,0,0,0,0,0,0.940634592723046,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0.18378979906969,0.250707539292375,0.227336094654718,0,0,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0.224263725161227,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:105380525..105380559,- | |short_description=p@chr12:105380525..105380559,- | ||
}} | }} |
Latest revision as of 04:21, 24 July 2015
Short description: | p@chr12:105380525..105380559, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:105380525..105380559, - |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.33e-118 | 3 |
dendritic cell | 3.85e-33 | 10 |
crystallin accumulating cell | 3.79e-11 | 4 |
vertebrate lens cell | 3.79e-11 | 4 |
lens epithelial cell | 3.79e-11 | 4 |
immature conventional dendritic cell | 5.54e-08 | 5 |
common dendritic progenitor | 5.54e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 3.79e-11 | 4 |
transparent eye structure | 3.79e-11 | 4 |
simple cuboidal epithelium | 3.79e-11 | 4 |
cranial placode | 3.79e-11 | 4 |
lens of camera-type eye | 3.79e-11 | 4 |
epithelium of lens | 3.79e-11 | 4 |
lens placode | 3.79e-11 | 4 |
lens vesicle | 3.79e-11 | 4 |