FFCP PHASE1:Hg19::chr12:106691707..106691726,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:106691707..106691726,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr12:106691707..106691726,+ | |description=CAGE_peak_at_chr12:106691707..106691726,+ | ||
|id=chr12:106691707..106691726,+ | |id=chr12:106691707..106691726,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.58e-11!5 | |ontology_enrichment_celltype=CL:0002322!1.58e-11!5 | ||
|ontology_enrichment_celltype_v019=CL:0000167;6.98e-21;1!CL:0000164;6.98e-21;1!CL:0000502;6.98e-21;1!CL:0000172;6.98e-21;1!CL:0000173;6.98e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,5.16e-21,1;CL:0000164,5.16e-21,1;CL:0000502,5.16e-21,1;CL:0000172,5.16e-21,1;CL:0000173,5.16e-21,1;CL:0002351,5.16e-21,1 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.30e-21;1!CL:0002351;6.98e-21;1!UBERON:0008814;2.73e-11;2!UBERON:0010056;2.73e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;6.98e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,5.16e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0001042!4.72e-09!10;UBERON:0009145!4.72e-09!10;UBERON:0006562!3.39e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.39e-27;3!UBERON:0001033;1.39e-27;3!UBERON:0002372;2.82e-21;1!UBERON:0001961;2.82e-21;1!UBERON:0001744;2.82e-21;1!UBERON:0001042;2.82e-21;1!UBERON:0001735;2.82e-21;1!UBERON:0005795;6.98e-21;1!UBERON:0000341;1.82e-11;2!UBERON:0006562;2.47e-11;2!UBERON:0001043;5.18e-08;3!UBERON:0000165;4.63e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.39e-27,3;UBERON:0001033,1.39e-27,3;UBERON:0010056,1.39e-27,3;UBERON:0002372,2.82e-21,1;UBERON:0001961,2.82e-21,1;UBERON:0001744,2.82e-21,1;UBERON:0001735,2.82e-21,1;UBERON:0001042,1.21e-18,10;UBERON:0009145,1.21e-18,10;UBERON:0006562,5.12e-17,11;UBERON:0000341,1.82e-11,2;UBERON:0001557,3.92e-10,19;UBERON:0000166,7.82e-09,22;UBERON:0005795,1.20e-08,22;UBERON:0001043,5.18e-08,3;UBERON:0009143,5.18e-08,3;UBERON:0000165,7.77e-07,29;UBERON:0000930,7.77e-07,29 | |||
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| ||
|short_description=p@chr12:106691707..106691726,+ | |short_description=p@chr12:106691707..106691726,+ | ||
}} | }} |
Latest revision as of 04:28, 24 July 2015
Short description: | p@chr12:106691707..106691726, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:106691707..106691726, + |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 5.16e-21 | 1 |
enteroendocrine cell | 5.16e-21 | 1 |
type D enteroendocrine cell | 5.16e-21 | 1 |
somatostatin secreting cell | 5.16e-21 | 1 |
pancreatic D cell | 5.16e-21 | 1 |
progenitor cell of endocrine pancreas | 5.16e-21 | 1 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.39e-27 | 3 |
gustatory system | 1.39e-27 | 3 |
future tongue | 1.39e-27 | 3 |
tonsil | 2.82e-21 | 1 |
mucosa-associated lymphoid tissue | 2.82e-21 | 1 |
lymphoid tissue | 2.82e-21 | 1 |
tonsillar ring | 2.82e-21 | 1 |
chordate pharynx | 1.21e-18 | 10 |
pharyngeal region of foregut | 1.21e-18 | 10 |
pharynx | 5.12e-17 | 11 |
throat | 1.82e-11 | 2 |
upper respiratory tract | 3.92e-10 | 19 |
oral opening | 7.82e-09 | 22 |
embryonic uterus | 1.20e-08 | 22 |
esophagus | 5.18e-08 | 3 |
esophageal region | 5.18e-08 | 3 |
mouth | 7.77e-07 | 29 |
stomodeum | 7.77e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 5.16e-21 | 1 |