FFCP PHASE1:Hg19::chr10:73724131..73724206,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:73724131..73724206,+
|short_description=p1@CHST3
|description=CAGE_peak_1_at_CHST3_5end
|association_with_transcript=8bp_to_ENST00000373115_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9469 | |EntrezGene=9469 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1971 | |HGNC=1971 | ||
|TSSclassifier=strong | |||
|UniProt=Q7LGC8 | |UniProt=Q7LGC8 | ||
|association_with_transcript=8bp_to_ENST00000373115_5end | |||
|cluster_id=chr10:73724131..73724206,+ | |||
|description=CAGE_peak_1_at_CHST3_5end | |||
|id=chr10:73724131..73724206,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.29e-18!180;CL:0000057!8.45e-12!75;CL:0000136!2.66e-09!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.36e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.86e-12,76;CL:0000136,1.21e-09,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.05e-25!365;UBERON:0000481!1.21e-18!347;UBERON:0000468!2.36e-15!659;UBERON:0000483!2.98e-15!309;UBERON:0000119!3.34e-15!312;UBERON:0000467!2.37e-13!625;UBERON:0000477!2.63e-13!286;UBERON:0000064!3.03e-13!219;UBERON:0000480!4.48e-13!626;UBERON:0000062!7.89e-13!511;UBERON:0004121!4.79e-12!169;UBERON:0004111!2.50e-11!241;UBERON:0003075!2.64e-11!86;UBERON:0007284!2.64e-11!86;UBERON:0000924!3.85e-11!173;UBERON:0006601!3.85e-11!173;UBERON:0005743!8.99e-11!86;UBERON:0000033!1.62e-10!123;UBERON:0002100!3.37e-10!216;UBERON:0000025!3.61e-10!194;UBERON:0002346!5.05e-10!90;UBERON:0001017!9.83e-10!82;UBERON:0002050!1.30e-09!605;UBERON:0005423!1.30e-09!605;UBERON:0003103!1.85e-09!69;UBERON:0000923!2.11e-09!604;UBERON:0005291!2.11e-09!604;UBERON:0006598!2.11e-09!604;UBERON:0002532!2.11e-09!604;UBERON:0000153!2.23e-09!129;UBERON:0007811!2.23e-09!129;UBERON:0001049!2.27e-09!57;UBERON:0005068!2.27e-09!57;UBERON:0006241!2.27e-09!57;UBERON:0007135!2.27e-09!57;UBERON:0007023!2.82e-09!115;UBERON:0000073!4.61e-09!94;UBERON:0001016!4.61e-09!94;UBERON:0000922!7.56e-09!612;UBERON:0005256!7.68e-09!143;UBERON:0000955!1.10e-08!69;UBERON:0006238!1.10e-08!69;UBERON:0002616!1.48e-08!59;UBERON:0003104!3.41e-08!238;UBERON:0009142!3.41e-08!238;UBERON:0003102!7.64e-08!95;UBERON:0007100!4.08e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.90e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.64e-15,132;UBERON:0000483,2.38e-12,306;UBERON:0000119,3.62e-12,309;UBERON:0003075,1.42e-11,82;UBERON:0007284,1.42e-11,82;UBERON:0010371,2.23e-11,104;UBERON:0004121,2.08e-10,171;UBERON:0000924,2.08e-10,171;UBERON:0006601,2.08e-10,171;UBERON:0002346,4.92e-10,86;UBERON:0001017,1.76e-09,81;UBERON:0007023,3.33e-09,114;UBERON:0001049,4.24e-09,56;UBERON:0005068,4.24e-09,56;UBERON:0006241,4.24e-09,56;UBERON:0007135,4.24e-09,56;UBERON:0003103,6.37e-09,68;UBERON:0004111,2.06e-08,240;UBERON:0000955,2.49e-08,68;UBERON:0006238,2.49e-08,68;UBERON:0003104,3.19e-08,160;UBERON:0009142,3.19e-08,160;UBERON:0000073,6.73e-08,53;UBERON:0002616,6.73e-08,53;UBERON:0001016,1.26e-07,89;UBERON:0000025,1.71e-07,192;UBERON:0011216,2.30e-07,223;UBERON:0007100,2.31e-07,27;UBERON:0003102,3.84e-07,99 | |||
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| ||
|short_description=p1@CHST3 | |||
}} | }} |
Latest revision as of 04:47, 19 September 2015
Short description: | p1@CHST3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHST3_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000373115_5end |
EntrezGene: | CHST3 |
HGNC: | 1971 |
UniProt: | Q7LGC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.86e-12 | 76 |
fat cell | 1.21e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 4.64e-15 | 132 |
epithelium | 2.38e-12 | 306 |
cell layer | 3.62e-12 | 309 |
neural plate | 1.42e-11 | 82 |
presumptive neural plate | 1.42e-11 | 82 |
ecto-epithelium | 2.23e-11 | 104 |
ectoderm-derived structure | 2.08e-10 | 171 |
ectoderm | 2.08e-10 | 171 |
presumptive ectoderm | 2.08e-10 | 171 |
neurectoderm | 4.92e-10 | 86 |
central nervous system | 1.76e-09 | 81 |
adult organism | 3.33e-09 | 114 |
neural tube | 4.24e-09 | 56 |
neural rod | 4.24e-09 | 56 |
future spinal cord | 4.24e-09 | 56 |
neural keel | 4.24e-09 | 56 |
compound organ | 6.37e-09 | 68 |
anatomical conduit | 2.06e-08 | 240 |
brain | 2.49e-08 | 68 |
future brain | 2.49e-08 | 68 |
mesenchyme | 3.19e-08 | 160 |
entire embryonic mesenchyme | 3.19e-08 | 160 |
regional part of nervous system | 6.73e-08 | 53 |
regional part of brain | 6.73e-08 | 53 |
nervous system | 1.26e-07 | 89 |
tube | 1.71e-07 | 192 |
organ system subdivision | 2.30e-07 | 223 |
primary circulatory organ | 2.31e-07 | 27 |
surface structure | 3.84e-07 | 99 |