FFCP PHASE1:Hg19::chr17:38633109..38633113,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38633109..38633113,- | |||
|coexpression_cluster_id=C3630 | |||
|description=CAGE_peak_at_chr17:38633109..38633113,- | |description=CAGE_peak_at_chr17:38633109..38633113,- | ||
|id=chr17:38633109..38633113,- | |id=chr17:38633109..38633113,- | ||
|ontology_enrichment_celltype=CL:0002076!9.06e-35!43;CL:0000223!3.58e-29!59;CL:0000066!1.65e-26!254;CL:0002251!1.84e-19!21;CL:0002368!5.01e-18!13;CL:0002202!1.16e-09!9;CL:0002632!1.16e-09!9;CL:0000622!3.26e-09!5;CL:0002159!3.36e-09!13;CL:0002541!2.92e-08!3;CL:0002621!3.23e-08!3;CL:0000154!1.19e-07!6;CL:0002150!5.42e-07!3;CL:0000861!5.42e-07!3;CL:0000317!8.78e-07!2;CL:1000448!8.78e-07!2;CL:0002308!8.78e-07!2;CL:0002140!8.78e-07!2;CL:0002327!9.20e-07!4 | |ontology_enrichment_celltype=CL:0002076!9.06e-35!43;CL:0000223!3.58e-29!59;CL:0000066!1.65e-26!254;CL:0002251!1.84e-19!21;CL:0002368!5.01e-18!13;CL:0002202!1.16e-09!9;CL:0002632!1.16e-09!9;CL:0000622!3.26e-09!5;CL:0002159!3.36e-09!13;CL:0002541!2.92e-08!3;CL:0002621!3.23e-08!3;CL:0000154!1.19e-07!6;CL:0002150!5.42e-07!3;CL:0000861!5.42e-07!3;CL:0000317!8.78e-07!2;CL:1000448!8.78e-07!2;CL:0002308!8.78e-07!2;CL:0002140!8.78e-07!2;CL:0002327!9.20e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.81e-20;13!CL:0002159;1.37e-19;14!CL:0002327;6.79e-18;4!CL:0000317;3.16e-17;2!CL:1000448;3.16e-17;2!CL:0002308;3.16e-17;2!CL:0002140;3.16e-17;2!CL:0000575;4.07e-16;2!CL:0000622;4.31e-15;5!CL:0000362;2.58e-14;9!CL:0002202;1.12e-13;9!CL:0002632;1.12e-13;9!CL:0000154;1.15e-12;6!CL:0000240;2.14e-12;6!CL:0000311;2.14e-12;6!CL:0000079;2.14e-12;6!CL:0000237;2.14e-12;6!CL:0002076;2.74e-11;42!CL:0002328;4.65e-11;3!CL:0000307;4.65e-11;3!CL:0002336;1.74e-09;1!CL:0002261;1.74e-09;1!CL:0002170;1.74e-09;1!CL:0002252;2.70e-09;1!CL:0000244;1.07e-08;4!CL:0000731;1.07e-08;4!CL:0000150;1.32e-08;9!CL:0002077;2.09e-07;34!CL:0002537;3.57e-07;5!CL:0000312;4.03e-07;5!CL:0000349;9.95e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.31e-20,13;CL:0002159,1.70e-19,14;CL:0002327,7.01e-18,4;CL:0000317,3.30e-17,2;CL:1000448,3.30e-17,2;CL:0002308,3.30e-17,2;CL:0002140,3.30e-17,2;CL:0002076,1.41e-16,42;CL:0000575,9.48e-16,2;CL:0000622,4.75e-15,5;CL:0000362,2.21e-14,9;CL:0002202,1.62e-13,9;CL:0002632,1.62e-13,9;CL:0000154,1.24e-12,6;CL:0000240,1.77e-12,6;CL:0000311,1.77e-12,6;CL:0000079,1.77e-12,6;CL:0000237,1.77e-12,6;CL:0000036,1.77e-12,6;CL:0000357,1.77e-12,6;CL:0000114,1.77e-12,6;CL:0000066,3.16e-12,253;CL:0000223,1.45e-11,58;CL:0000068,6.01e-11,3;CL:0000069,6.01e-11,3;CL:0000307,6.01e-11,3;CL:0000377,6.01e-11,3;CL:0002328,6.32e-11,3;CL:0002336,1.74e-09,1;CL:0002261,1.74e-09,1;CL:0002170,1.74e-09,1;CL:0002252,2.40e-09,1;CL:0000244,9.20e-09,4;CL:0000731,9.20e-09,4;CL:0000150,1.40e-08,9;CL:0002077,9.62e-08,34;CL:0000312,3.46e-07,5;CL:0002537,3.80e-07,5;CL:0000349,9.37e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000357;2.14e-12;6!CL:0000114;2.14e-12;6!CL:0000377;4.65e-11;3!CL:0000223;7.35e-09;58 | |||
|ontology_enrichment_disease=DOID:305!1.99e-10!106;DOID:1749!1.83e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:3111;6.46e-09;1!DOID:3603;6.46e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,3.58e-09,1;DOID:3603,3.58e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.49e-17!169;UBERON:0000925!7.49e-17!169;UBERON:0006595!7.49e-17!169;UBERON:0005631!1.50e-16!14;UBERON:0000158!1.50e-16!14;UBERON:0001004!1.85e-14!72;UBERON:0003124!1.80e-12!7;UBERON:0003729!8.76e-12!5;UBERON:0001007!2.48e-09!155;UBERON:0001555!2.48e-09!155;UBERON:0007026!2.48e-09!155;UBERON:0003343!2.94e-09!4;UBERON:0004785!2.94e-09!4;UBERON:0000065!4.25e-09!53;UBERON:0000478!1.03e-08!24;UBERON:0000476!2.92e-08!3;UBERON:0000920!2.92e-08!3;UBERON:0001949!3.23e-08!3;UBERON:0000077!8.41e-08!130;UBERON:0007196!8.79e-08!14;UBERON:0001558!8.79e-08!14;UBERON:0000166!9.53e-08!21;UBERON:0004923!2.62e-07!57;UBERON:0000161!2.87e-07!35;UBERON:0001041!6.12e-07!98;UBERON:0000165!7.76e-07!28;UBERON:0000930!7.76e-07!28;UBERON:0002419!8.78e-07!2;UBERON:0007771!8.78e-07!2;UBERON:0003297!8.78e-07!2;UBERON:0001821!8.78e-07!2;UBERON:0003487!8.78e-07!2;UBERON:0001820!8.78e-07!2;UBERON:0005089!8.78e-07!2;UBERON:0005088!8.78e-07!2;UBERON:0001911!9.20e-07!4;UBERON:0005333!9.20e-07!4;UBERON:0008425!9.20e-07!4;UBERON:0005311!9.20e-07!4;UBERON:0000344!9.89e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;6.79e-18;4!UBERON:0002419;3.16e-17;2!UBERON:0007771;3.16e-17;2!UBERON:0003297;3.16e-17;2!UBERON:0001821;3.16e-17;2!UBERON:0003487;3.16e-17;2!UBERON:0001820;3.16e-17;2!UBERON:0005631;1.14e-12;10!UBERON:0000158;1.14e-12;10!UBERON:0004815;4.65e-11;3!UBERON:0002031;4.65e-11;3!UBERON:0000305;1.12e-10;7!UBERON:0001003;1.20e-08;15!UBERON:0007376;1.20e-08;15!UBERON:0000964;1.63e-08;4!UBERON:0010409;1.63e-08;4!UBERON:0002365;1.92e-08;31!UBERON:0002330;1.92e-08;31!UBERON:0007196;2.83e-08;15!UBERON:0001558;2.83e-08;15!UBERON:0000365;4.03e-07;5!UBERON:0002185;5.64e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,7.01e-18,4;UBERON:0005333,7.01e-18,4;UBERON:0008425,7.01e-18,4;UBERON:0005311,7.01e-18,4;UBERON:0002419,3.30e-17,2;UBERON:0007771,3.30e-17,2;UBERON:0003297,3.30e-17,2;UBERON:0001821,3.30e-17,2;UBERON:0003487,3.30e-17,2;UBERON:0001820,3.30e-17,2;UBERON:0005089,3.30e-17,2;UBERON:0005088,3.30e-17,2;UBERON:0005085,2.10e-11,31;UBERON:0004815,6.32e-11,3;UBERON:0002031,6.32e-11,3;UBERON:0000305,1.22e-10,7;UBERON:0004871,2.26e-09,8;UBERON:0000076,3.27e-09,8;UBERON:0005157,3.47e-09,47;UBERON:0005631,3.95e-09,14;UBERON:0000158,3.95e-09,14;UBERON:0001003,1.10e-08,15;UBERON:0007376,1.10e-08,15;UBERON:0007383,1.10e-08,15;UBERON:0002365,1.24e-08,31;UBERON:0002330,1.24e-08,31;UBERON:0000964,2.48e-08,4;UBERON:0010409,2.48e-08,4;UBERON:0004348,2.48e-08,4;UBERON:0005427,2.48e-08,4;UBERON:0007196,3.51e-08,15;UBERON:0001558,3.51e-08,15;UBERON:0000365,3.57e-07,5;UBERON:0005153,6.61e-07,37;UBERON:0002185,6.76e-07,5 | |||
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| ||
|short_description=p@chr17:38633109..38633113,- | |short_description=p@chr17:38633109..38633113,- | ||
}} | }} |
Latest revision as of 16:30, 25 July 2015
Short description: | p@chr17:38633109..38633113, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38633109..38633113, - |
Coexpression cluster: | C3630_Sebocyte_Mammary_Keratinocyte_Urothelial_Tracheal_Corneal_Esophageal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland | 7.01e-18 | 4 |
mammary bud | 7.01e-18 | 4 |
mammary ridge | 7.01e-18 | 4 |
mammary placode | 7.01e-18 | 4 |
skin gland | 3.30e-17 | 2 |
epidermis gland | 3.30e-17 | 2 |
gland of integumental system | 3.30e-17 | 2 |
sebaceous gland | 3.30e-17 | 2 |
skin sebaceous gland | 3.30e-17 | 2 |
sweat gland | 3.30e-17 | 2 |
sweat gland placode | 3.30e-17 | 2 |
sebaceous gland placode | 3.30e-17 | 2 |
ectodermal placode | 2.10e-11 | 31 |
lower respiratory tract epithelium | 6.32e-11 | 3 |
epithelium of bronchus | 6.32e-11 | 3 |
amnion | 1.22e-10 | 7 |
somatic layer of lateral plate mesoderm | 2.26e-09 | 8 |
external ectoderm | 3.27e-09 | 8 |
epithelial fold | 3.47e-09 | 47 |
extraembryonic membrane | 3.95e-09 | 14 |
membranous layer | 3.95e-09 | 14 |
skin epidermis | 1.10e-08 | 15 |
outer epithelium | 1.10e-08 | 15 |
enveloping layer of ectoderm | 1.10e-08 | 15 |
exocrine gland | 1.24e-08 | 31 |
exocrine system | 1.24e-08 | 31 |
cornea | 2.48e-08 | 4 |
eye surface | 2.48e-08 | 4 |
optic eminence | 2.48e-08 | 4 |
corneal primordium | 2.48e-08 | 4 |
tracheobronchial tree | 3.51e-08 | 15 |
lower respiratory tract | 3.51e-08 | 15 |
urothelium | 3.57e-07 | 5 |
epithelial bud | 6.61e-07 | 37 |
bronchus | 6.76e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 3.58e-09 | 1 |
mucinous cystadenocarcinoma | 3.58e-09 | 1 |