FFCP PHASE1:Hg19::chr17:41394202..41394213,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:41394202..41394213,+ | |||
|description=CAGE_peak_at_chr17:41394202..41394213,+ | |description=CAGE_peak_at_chr17:41394202..41394213,+ | ||
|id=chr17:41394202..41394213,+ | |id=chr17:41394202..41394213,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;1.07e-13;2!CL:0002535;1.07e-13;2!CL:0002563;1.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.07e-13,2;CL:0002253,1.55e-13,2;CL:0002563,2.04e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.17e-30!235;DOID:14566!6.96e-29!239;DOID:305!1.11e-22!106;DOID:0050687!9.04e-20!143;DOID:0050686!6.54e-17!137;DOID:1749!1.58e-15!14;DOID:299!4.17e-10!25;DOID:2531!2.04e-08!51;DOID:0060083!2.04e-08!51;DOID:7!7.68e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.41e-16;14!DOID:4556;1.41e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.41e-16,14;DOID:4556,1.54e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0000344!3.67e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.07e-13;2!UBERON:0004801;1.07e-13;2!UBERON:0001052;1.69e-07;4!UBERON:0001242;1.69e-07;4!UBERON:0001262;1.69e-07;4!UBERON:0004786;1.69e-07;4!UBERON:0004808;1.69e-07;4!UBERON:0001277;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.07e-13,2;UBERON:0004801,1.07e-13,2;UBERON:0001052,2.04e-07,4;UBERON:0001242,2.04e-07,4;UBERON:0001262,2.04e-07,4;UBERON:0004786,2.04e-07,4;UBERON:0004808,2.04e-07,4;UBERON:0001277,2.04e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.774672005803016,0.426507697462265,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.47296445977717,0,0,0,0,0,0,0.306083892370903,0,1.91801137739712,0,0.199463657621632,0,0,0,0.622822248995575,0.251248665256743,0,0,0,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.929015875628594,0.28853842595289,0.213425530045242,1.11598390910176,0,0,0.423347165447766,0,0,0,0,0,0.677167111206413,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0.33307196799782,0,0.37428108081644,0,0,0.334330152832435,0,0,0,0,0,0,0.333926115068718,0,0.211125408127993,0,0,0,0.306806047506464,0.492339221844278,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0.139423744278603,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0.75901493089674,4.76809736941136,0.210998064528027,0,0.424059214301822,1.08194319871046,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,1.30588809870604,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0.686379991447858,0.14405479798815,0.248505071130865,0,0.407712618220842,0,1.52997326454483,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,1.15149118391667,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852548188666271,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0.691743174681154,0,0.606596470166591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0.106691729694141,0,0,0,0,0,0,0,0.786329709279482,0,0,0.425149840203366,0,0,0,0.47317047000752,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.550285795565037,0.462102664601353,0.381382095467167,0,0.795664888465099,0,0.20170506870352,0,0,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0.827356886187777,0.222462803784138,0,0,0.560544326627578,0,0.215927591218621,0,0,0.158013611732727,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0.671132590786754,0.588901401691458,0.487671699929078,0,0,0,0,0,0.795803100645473,0.237840181555137,0.5647304101948,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0.535661815816973,1.41157948686277,0.481448200135009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0.407016343054873,0.213454691755431,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr17:41394202..41394213,+ | |short_description=p@chr17:41394202..41394213,+ | ||
}} | }} |
Latest revision as of 17:13, 25 July 2015
Short description: | p@chr17:41394202..41394213, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:41394202..41394213, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.07e-13 | 2 |
epithelial cell of large intestine | 1.55e-13 | 2 |
intestinal epithelial cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.07e-13 | 2 |
cervix epithelium | 1.07e-13 | 2 |
rectum | 2.04e-07 | 4 |
intestinal mucosa | 2.04e-07 | 4 |
wall of intestine | 2.04e-07 | 4 |
gastrointestinal system mucosa | 2.04e-07 | 4 |
gastrointestinal system epithelium | 2.04e-07 | 4 |
intestinal epithelium | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.41e-16 | 14 |
lung large cell carcinoma | 1.54e-09 | 3 |