FFCP PHASE1:Hg19::chr12:19556960..19556982,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=121536 | |EntrezGene=121536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24051 | |HGNC=24051 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZR7 | |UniProt=F5GZR7 | ||
|association_with_transcript=0bp_to_ENST00000538425_5end | |association_with_transcript=0bp_to_ENST00000538425_5end | ||
|cluster_id=chr12:19556960..19556982,+ | |||
|coexpression_cluster_id=C267 | |||
|description=CAGE_peak_10_at_AEBP2_5end | |description=CAGE_peak_10_at_AEBP2_5end | ||
|id=chr12:19556960..19556982,+ | |id=chr12:19556960..19556982,+ | ||
|ontology_enrichment_celltype=CL:0000039!4.83e-49!7;CL:0000586!4.83e-49!7;CL:0002541!1.55e-21!3;CL:0000313!3.33e-08!1 | |ontology_enrichment_celltype=CL:0000039!4.83e-49!7;CL:0000586!4.83e-49!7;CL:0002541!1.55e-21!3;CL:0000313!3.33e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.23e-66;7!CL:0000586;2.23e-66;7!CL:0002541;9.20e-29;3!CL:0000313;1.33e-10;1!CL:0000349;4.18e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.46e-66,7;CL:0000586,2.46e-66,7;CL:0002541,9.20e-29,3;CL:0000313,1.33e-10,1;CL:0000349,4.18e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.49e-33;10!UBERON:0005564;1.49e-33;10!UBERON:0003124;3.08e-11;1 | |||
|ontology_enrichment_disease=DOID:3095!8.25e-25!22;DOID:2994!8.25e-25!22;DOID:1799!9.79e-09!1;DOID:10165!9.79e-09!1;DOID:1798!9.79e-09!1;DOID:2152!3.33e-08!1 | |ontology_enrichment_disease=DOID:3095!8.25e-25!22;DOID:2994!8.25e-25!22;DOID:1799!9.79e-09!1;DOID:10165!9.79e-09!1;DOID:1798!9.79e-09!1;DOID:2152!3.33e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.02e-34;22!DOID:2994;4.02e-34;22!DOID:1799;2.53e-11;1!DOID:10165;2.53e-11;1!DOID:1798;2.53e-11;1!DOID:2152;1.33e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.18e-34,22;DOID:2994,4.18e-34,22;DOID:1799,2.53e-11,1;DOID:10165,2.53e-11,1;DOID:1798,2.53e-11,1;DOID:2152,1.33e-10,1;DOID:0050687,3.07e-09,143;DOID:305,1.49e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000473!6.01e-31!8;UBERON:0003135!2.15e-22!11;UBERON:0000476!1.55e-21!3;UBERON:0000920!1.55e-21!3;UBERON:0003124!2.33e-16!7;UBERON:0000991!1.88e-15!21;UBERON:0009196!1.88e-15!21;UBERON:0009117!1.88e-15!21;UBERON:0005564!1.88e-15!21;UBERON:0004176!1.03e-14!22;UBERON:0005631!2.25e-12!14;UBERON:0000158!2.25e-12!14;UBERON:0003101!5.94e-11!22;UBERON:0000079!5.94e-11!22;UBERON:0002323!1.24e-08!46;UBERON:0003133!3.23e-08!48;UBERON:0004911!3.33e-08!1;UBERON:0004458!4.90e-08!49;UBERON:0000478!3.98e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.49e-29;8!UBERON:0003124;9.20e-29;3!UBERON:0000920;9.20e-29;3!UBERON:0003135;1.70e-21;11!UBERON:0000991;8.22e-16;21!UBERON:0005631;3.25e-15;10!UBERON:0000158;3.25e-15;10!UBERON:0003101;1.04e-10;22!UBERON:0000079;1.04e-10;22!UBERON:0004911;1.33e-10;1!UBERON:0000478;9.42e-10;24!UBERON:0002323;1.25e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.54e-29,8;UBERON:0000920,9.20e-29,3;UBERON:0003124,5.52e-22,7;UBERON:0003135,1.73e-21,11;UBERON:0005631,8.66e-17,14;UBERON:0000158,8.66e-17,14;UBERON:0000991,8.33e-16,21;UBERON:0009196,8.33e-16,21;UBERON:0009117,8.33e-16,21;UBERON:0005564,8.33e-16,21;UBERON:0004176,4.53e-15,22;UBERON:0003101,1.05e-10,22;UBERON:0000079,1.05e-10,22;UBERON:0004911,1.33e-10,1;UBERON:0000478,9.42e-10,24;UBERON:0002323,1.92e-09,46;UBERON:0003133,5.24e-09,48;UBERON:0004458,8.07e-09,49;UBERON:0003886,6.18e-08,54;UBERON:0005156,3.42e-07,59;UBERON:0000990,3.42e-07,59;UBERON:0002553,6.11e-07,61 | |||
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|short_description=p10@AEBP2 | |short_description=p10@AEBP2 | ||
}} | }} |
Latest revision as of 18:03, 17 September 2015
Short description: | p10@AEBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_AEBP2_5end |
Coexpression cluster: | C267_pancreatic_placenta_choriocarcinoma_testicular_teratocarcinoma_chorionic_clear |
Association with transcript: | 0bp_to_ENST00000538425_5end |
EntrezGene: | AEBP2 |
HGNC: | 24051 |
UniProt: | F5GZR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.46e-66 | 7 |
germ cell | 2.46e-66 | 7 |
chorionic membrane mesenchymal stem cell | 9.20e-29 | 3 |
serous secreting cell | 1.33e-10 | 1 |
extraembryonic cell | 4.18e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
testis | 1.54e-29 | 8 |
egg chorion | 9.20e-29 | 3 |
chorion | 5.52e-22 | 7 |
male reproductive organ | 1.73e-21 | 11 |
extraembryonic membrane | 8.66e-17 | 14 |
membranous layer | 8.66e-17 | 14 |
gonad | 8.33e-16 | 21 |
indifferent external genitalia | 8.33e-16 | 21 |
indifferent gonad | 8.33e-16 | 21 |
gonad primordium | 8.33e-16 | 21 |
external genitalia | 4.53e-15 | 22 |
male organism | 1.05e-10 | 22 |
male reproductive system | 1.05e-10 | 22 |
epithelium of female gonad | 1.33e-10 | 1 |
extraembryonic structure | 9.42e-10 | 24 |
body cavity | 1.92e-09 | 46 |
reproductive organ | 5.24e-09 | 48 |
body cavity or lining | 8.07e-09 | 49 |
body cavity precursor | 6.18e-08 | 54 |
reproductive structure | 3.42e-07 | 59 |
reproductive system | 3.42e-07 | 59 |
anatomical cavity | 6.11e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.18e-34 | 22 |
germ cell cancer | 4.18e-34 | 22 |
islet cell tumor | 2.53e-11 | 1 |
endocrine pancreas cancer | 2.53e-11 | 1 |
pancreatic endocrine carcinoma | 2.53e-11 | 1 |
ovary epithelial cancer | 1.33e-10 | 1 |
cell type cancer | 3.07e-09 | 143 |
carcinoma | 1.49e-07 | 106 |