FFCP PHASE1:Hg19::chr10:95351747..95351759,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:95351747..95351759,+
|short_description=p2@CU676593
|description=CAGE_peak_2_at_CU676593_5end
|association_with_transcript=-73bp_to_CU676593_5end
|Entrez...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-73bp_to_CU676593_5end | |||
|cluster_id=chr10:95351747..95351759,+ | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_2_at_CU676593_5end | |||
|id=chr10:95351747..95351759,+ | |||
|ontology_enrichment_celltype=CL:0000181!8.17e-16!12;CL:0000417!8.17e-16!12;CL:0000668!8.17e-16!12;CL:0000414!8.17e-16!12;CL:0000412!8.17e-16!12;CL:0000182!8.17e-16!12;CL:0000135!6.43e-08!3;CL:0000386!6.43e-08!3;CL:0000388!6.43e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.92e-29;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.79e-29,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.93e-19;11!UBERON:0009497;5.29e-16;13!UBERON:0001041;2.69e-07;30!UBERON:0003104;2.69e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.05e-17!19;UBERON:0006925!3.05e-17!19;UBERON:0008836!3.05e-17!19;UBERON:0008835!1.03e-14!22;UBERON:0003894!1.03e-14!22;UBERON:0009854!5.11e-14!23;UBERON:0007499!8.58e-13!25;UBERON:0009497!8.58e-13!25;UBERON:0000015!8.58e-13!25;UBERON:0002423!8.58e-13!25;UBERON:0006235!8.58e-13!25;UBERON:0004161!8.58e-13!25;UBERON:0005057!2.99e-12!26;UBERON:0009856!2.99e-12!26;UBERON:0003929!9.91e-12!54;UBERON:0002365!4.57e-10!31;UBERON:0002330!4.57e-10!31;UBERON:0002368!9.07e-09!35;UBERON:0000043!6.43e-08!3;UBERON:0002530!3.06e-07!59;UBERON:0005911!6.42e-07!82;UBERON:0002426!9.67e-07!1;UBERON:0003831!9.67e-07!1;UBERON:0003898!9.67e-07!1;UBERON:0004830!9.67e-07!1;UBERON:0001774!9.67e-07!1;UBERON:0003830!9.67e-07!1;UBERON:0005175!9.67e-07!1;UBERON:0003897!9.67e-07!1;UBERON:0001103!9.67e-07!1;UBERON:0010084!9.67e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.80e-41;19!UBERON:0006925;1.80e-41;19!UBERON:0002423;1.40e-31;25!UBERON:0002365;1.46e-25;31!UBERON:0002330;1.46e-25;31!UBERON:0002368;3.69e-21;33!UBERON:0000949;4.67e-16;43!UBERON:0005172;2.80e-10;52!UBERON:0005173;2.80e-10;52!UBERON:0002417;4.20e-09;58!UBERON:0000916;4.20e-09;58!UBERON:0002530;1.18e-08;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.68e-41,19;UBERON:0006925,1.68e-41,19;UBERON:0008836,1.68e-41,19;UBERON:0008835,7.03e-36,22;UBERON:0003894,7.03e-36,22;UBERON:0009854,2.49e-34,23;UBERON:0007499,1.33e-31,25;UBERON:0009497,1.33e-31,25;UBERON:0000015,1.33e-31,25;UBERON:0002423,1.33e-31,25;UBERON:0006235,1.33e-31,25;UBERON:0004161,1.33e-31,25;UBERON:0009856,2.14e-30,26;UBERON:0002365,1.59e-25,31;UBERON:0002330,1.59e-25,31;UBERON:0002368,1.26e-22,35;UBERON:0000949,1.26e-17,45;UBERON:0003929,1.06e-14,54;UBERON:0005172,1.06e-14,54;UBERON:0005173,1.06e-14,54;UBERON:0002530,1.85e-13,59;UBERON:0002417,3.10e-13,60;UBERON:0000916,3.10e-13,60;UBERON:0005911,1.11e-09,82;UBERON:0001041,4.02e-09,87;UBERON:0005177,7.57e-08,101;UBERON:0009569,4.57e-07,112;UBERON:0003914,9.28e-07,117 | |||
|phase1_expression=0,0.856402095563933,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,3.9313088667105,1.77236972004421,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91555844261345,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,5.74277184738353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10296455230113,0.494495150286999,0.539228350833479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83622371137672,9.27548222385549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.856402095563933,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,3.9313088667105,1.77236972004421,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91555844261345,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,5.74277184738353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10296455230113,0.494495150286999,0.539228350833479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83622371137672,9.27548222385549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@CU676593 | |||
}} | }} |
Latest revision as of 16:53, 23 July 2015
Short description: | p2@CU676593 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CU676593_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | -73bp_to_CU676593_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.79e-29 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.68e-41 | 19 |
digestive gland | 1.68e-41 | 19 |
liver bud | 1.68e-41 | 19 |
hepatic diverticulum | 7.03e-36 | 22 |
liver primordium | 7.03e-36 | 22 |
digestive tract diverticulum | 2.49e-34 | 23 |
epithelial sac | 1.33e-31 | 25 |
epithelium of foregut-midgut junction | 1.33e-31 | 25 |
anatomical boundary | 1.33e-31 | 25 |
hepatobiliary system | 1.33e-31 | 25 |
foregut-midgut junction | 1.33e-31 | 25 |
septum transversum | 1.33e-31 | 25 |
sac | 2.14e-30 | 26 |
exocrine gland | 1.59e-25 | 31 |
exocrine system | 1.59e-25 | 31 |
endocrine gland | 1.26e-22 | 35 |
endocrine system | 1.26e-17 | 45 |
gut epithelium | 1.06e-14 | 54 |
abdomen element | 1.06e-14 | 54 |
abdominal segment element | 1.06e-14 | 54 |
gland | 1.85e-13 | 59 |
abdominal segment of trunk | 3.10e-13 | 60 |
abdomen | 3.10e-13 | 60 |
endo-epithelium | 1.11e-09 | 82 |
foregut | 4.02e-09 | 87 |
trunk region element | 7.57e-08 | 101 |
subdivision of trunk | 4.57e-07 | 112 |
epithelial tube | 9.28e-07 | 117 |