FFCP PHASE1:Hg19::chr12:56624590..56624611,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283375 | |EntrezGene=283375 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20502 | |HGNC=20502 | ||
|TSSclassifier=strong | |||
|UniProt=C9JVC6 | |UniProt=C9JVC6 | ||
|association_with_transcript=44bp_to_ENST00000437277_5end | |association_with_transcript=44bp_to_ENST00000437277_5end | ||
|cluster_id=chr12:56624590..56624611,+ | |||
|coexpression_cluster_id=C27 | |||
|description=CAGE_peak_5_at_SLC39A5_5end | |description=CAGE_peak_5_at_SLC39A5_5end | ||
|id=chr12:56624590..56624611,+ | |id=chr12:56624590..56624611,+ | ||
|ontology_enrichment_celltype=CL:0000181!6.92e-19!12;CL:0000417!6.92e-19!12;CL:0000668!6.92e-19!12;CL:0000414!6.92e-19!12;CL:0000412!6.92e-19!12;CL:0000182!6.92e-19!12;CL:0000313!9.10e-08!1;CL:0000223!1.78e-07!59;CL:0002563!1.93e-07!4 | |ontology_enrichment_celltype=CL:0000181!6.92e-19!12;CL:0000417!6.92e-19!12;CL:0000668!6.92e-19!12;CL:0000414!6.92e-19!12;CL:0000412!6.92e-19!12;CL:0000182!6.92e-19!12;CL:0000313!9.10e-08!1;CL:0000223!1.78e-07!59;CL:0002563!1.93e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002535;6.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,6.42e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.53e-16;1 | |||
|ontology_enrichment_disease=DOID:2152!9.10e-08!1 | |ontology_enrichment_disease=DOID:2152!9.10e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.67e-22!27;UBERON:0001155!4.33e-18!9;UBERON:0005409!7.57e-17!35;UBERON:0000059!9.01e-15!11;UBERON:0009854!5.91e-13!23;UBERON:0009497!6.53e-12!25;UBERON:0000015!6.53e-12!25;UBERON:0002423!6.53e-12!25;UBERON:0006235!6.53e-12!25;UBERON:0004161!6.53e-12!25;UBERON:0002107!9.59e-12!19;UBERON:0006925!9.59e-12!19;UBERON:0008836!9.59e-12!19;UBERON:0009856!2.30e-11!26;UBERON:0004921!3.34e-11!129;UBERON:0004185!3.34e-11!129;UBERON:0003929!2.50e-10!54;UBERON:0008835!4.52e-10!22;UBERON:0003894!4.52e-10!22;UBERON:0001007!4.74e-10!155;UBERON:0001555!4.74e-10!155;UBERON:0007026!4.74e-10!155;UBERON:0004119!6.32e-09!169;UBERON:0000925!6.32e-09!169;UBERON:0006595!6.32e-09!169;UBERON:0007499!8.47e-09!25;UBERON:0005057!1.94e-08!26;UBERON:0005172!4.34e-08!55;UBERON:0005173!4.34e-08!55;UBERON:0001154!6.97e-08!1;UBERON:0001153!6.97e-08!1;UBERON:0001301!7.97e-08!1;UBERON:0004911!9.10e-08!1;UBERON:0002108!1.71e-07!14;UBERON:0001242!1.93e-07!4;UBERON:0001262!1.93e-07!4;UBERON:0004786!1.93e-07!4;UBERON:0004808!1.93e-07!4;UBERON:0001277!1.93e-07!4;UBERON:0002417!3.72e-07!61;UBERON:0000916!3.72e-07!61;UBERON:0002365!5.45e-07!31;UBERON:0002330!5.45e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.49e-30;17!UBERON:0002108;2.19e-28;4!UBERON:0005409;1.01e-23;22!UBERON:0004921;1.68e-14;33!UBERON:0006955;6.17e-09;2!UBERON:0004801;6.17e-09;2!UBERON:0001155;1.05e-07;9!UBERON:0001007;3.67e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.66e-30,17;UBERON:0002108,1.59e-28,4;UBERON:0005409,4.29e-21,25;UBERON:0004921,1.30e-09,118;UBERON:0001007,1.53e-09,145;UBERON:0001555,1.53e-09,145;UBERON:0007026,1.53e-09,145;UBERON:0006955,6.42e-09,2;UBERON:0004801,6.42e-09,2;UBERON:0004119,1.47e-08,160;UBERON:0000925,1.47e-08,160;UBERON:0006595,1.47e-08,160;UBERON:0001155,9.85e-08,9;UBERON:0003929,4.86e-07,54 | |||
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|short_description=p5@SLC39A5 | |short_description=p5@SLC39A5 | ||
}} | }} |
Latest revision as of 10:30, 19 September 2015
Short description: | p5@SLC39A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC39A5_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | 44bp_to_ENST00000437277_5end |
EntrezGene: | SLC39A5 |
HGNC: | 20502 |
UniProt: | C9JVC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.66e-30 | 17 |
small intestine | 1.59e-28 | 4 |
gastrointestinal system | 4.29e-21 | 25 |
subdivision of digestive tract | 1.30e-09 | 118 |
digestive system | 1.53e-09 | 145 |
digestive tract | 1.53e-09 | 145 |
primitive gut | 1.53e-09 | 145 |
uterine epithelium | 6.42e-09 | 2 |
cervix epithelium | 6.42e-09 | 2 |
endoderm-derived structure | 1.47e-08 | 160 |
endoderm | 1.47e-08 | 160 |
presumptive endoderm | 1.47e-08 | 160 |
colon | 9.85e-08 | 9 |
gut epithelium | 4.86e-07 | 54 |