FFCP PHASE1:Hg19::chr17:78261736..78261799,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57674 | |EntrezGene=57674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14539 | |HGNC=14539 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000559070_5end | |association_with_transcript=0bp_to_ENST00000559070_5end | ||
|cluster_id=chr17:78261736..78261799,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_2_at_RNF213_5end | |description=CAGE_peak_2_at_RNF213_5end | ||
|id=chr17:78261736..78261799,+ | |id=chr17:78261736..78261799,+ | ||
|ontology_enrichment_celltype=CL:0000766!5.36e-08!76;CL:0000839!1.55e-07!70;CL:0000738!3.03e-07!140;CL:0000557!3.10e-07!71;CL:0002031!3.26e-07!124;CL:0002087!5.35e-07!119;CL:0002194!7.69e-07!63;CL:0000576!7.69e-07!63;CL:0000040!7.69e-07!63;CL:0000559!7.69e-07!63 | |ontology_enrichment_celltype=CL:0000766!5.36e-08!76;CL:0000839!1.55e-07!70;CL:0000738!3.03e-07!140;CL:0000557!3.10e-07!71;CL:0002031!3.26e-07!124;CL:0002087!5.35e-07!119;CL:0002194!7.69e-07!63;CL:0000576!7.69e-07!63;CL:0000040!7.69e-07!63;CL:0000559!7.69e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000235;3.85e-19;6!CL:0002619;1.33e-10;3!CL:0000473;3.74e-07;39!CL:0000234;3.74e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.13e-19,6;CL:0002619,1.35e-10,3;CL:0002194,2.99e-10,59;CL:0000576,2.99e-10,59;CL:0000040,2.99e-10,59;CL:0000559,2.99e-10,59;CL:0002009,8.75e-10,61;CL:0000766,7.79e-09,72;CL:0000839,9.55e-09,66;CL:0000557,1.47e-08,67;CL:0000473,1.67e-07,48;CL:0000234,1.67e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.84e-26!115;UBERON:0001049!1.71e-08!57;UBERON:0005068!1.71e-08!57;UBERON:0006241!1.71e-08!57;UBERON:0007135!1.71e-08!57;UBERON:0002390!5.43e-08!102;UBERON:0003061!5.43e-08!102;UBERON:0002193!3.79e-07!112;UBERON:0003080!4.48e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.77e-07;6!UBERON:0005162;8.90e-07;2!UBERON:0000122;8.90e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.75e-15,114;UBERON:0002405,1.50e-09,93;UBERON:0002193,2.26e-08,108;UBERON:0002371,4.37e-08,76;UBERON:0002390,8.03e-08,98;UBERON:0003061,8.03e-08,98;UBERON:0002298,2.73e-07,6;UBERON:0001474,3.38e-07,82;UBERON:0005162,8.46e-07,2;UBERON:0000122,8.46e-07,2 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0,0.651032612147555,25.9741950118312,64.7787332037959,54.0908692031792,0,0.377875943688809,0.242584061187816,0.464858073811369,0,0,1.43846196161075,1.7931249457037,0.709446689665756,0,0.645484683583826,0,0.376484679085209,0,0.449446968890169,0.306083892370903,0.320929027076094,0.639337125799041,0.989553900560148,1.59570926097305,3.40979800426155,0.290209238628584,0.56738522469114,0,1.25624332628372,1.0429658368404,0.434377689410233,0.605399502633369,0,0,0,0.212604299965044,0,0.22465726229299,0,0.16072558669708,0,0.19891667719909,0.547992461293902,0,0,0.889509253863555,0,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0.393419540227666,0.393010762749165,0.822405995998037,0.83593247695339,0.32592226663359,0,0,0.445641827540694,0.294605907474837,0.221533894583621,0,1.79327847615945,0.780356085359269,0,0.276350017785848,0.289803085735052,0.444859689486181,0,1.04535523804977,0.906474741580529,0,0.34362744548263,0,1.27426165729639,0.651083453856419,0,0.150575119077773,0.255973222308837,0,0.473554504088034,0,0.80642697289893,0.802320587350522,0.868946423296794,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0.174129737299267,1.59549552622638,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.549605231791222,0,0,0,0,0,0,0.286836620748814,0.354668382198357,1.12135520028461,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.600952235626387,0,0,0,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,16.742756413943,3.27605971194933,12.1877553076757,0,0,0,0,0,0,0.985326475791887,0.616339038092582,0.621984346622316,0.288239906833923,0.25248486685276,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0,0,0.845302752556,0,1.04007436911366,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,27.9734695474738,31.642196760224,21.0833939483032,0.239624855491583,0,0,0,0.205476322550383,0,0.560425719967636,0.394061520403854,0.431255149719035,0.641715181398742,0,0,0,0.167516265334349,0,0.749007023947182,2.99161459204025,0,0.12269149171914,0,0.271265023699736,0.415941723061614,0.178428988797162,0,0.468565659970853,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0.862856803274467,0.320182673410333,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,1.03041011647722,0,0,0,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,1.29694662238543,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0,0.324621940274555,0.842391534340376,0,0,0,0.169291777801603,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0.33307196799782,0,0.37428108081644,13.771768851558,0.121360521749513,0.557216921387392,0.568272293612826,0.23874448473769,0.593929361665277,0,0,1.40669416410513,0,0.659215496907038,0.211125408127993,0.996239941255349,1.10513566212459,0,0,0.123084805461069,0,0,0.179021174675609,0,0.887790650732402,0,0,2.90799823828566,0.74214478529481,1.99613798001194,0.520855522170466,0.262379999988587,2.17499872630438,0,0.254253650292766,0.472775363535873,0,0,0,0,0.361789315876224,0,0.442317039724898,0,0.219385397153973,0,0,0.461701551022782,0,0,0,0,0,0.549585560411174,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0.37950746544837,0,0.210998064528027,0,0,0,0,0.884575645033392,0,0.889563386041866,0.370691816839509,0.104421949505455,2.02203398942031,1.60515529459758,1.1713222286267,0,0.19566461893209,0.485560759068186,0,0,1.53036380815245,2.21153028699708,0.150323419414493,0,0,0.330991955875499,0,0,0.569219092059585,0.138674673013139,0,0.293977192243133,0,1.39781334593624,0,0,0,0,0.193978032976839,0,0,0.137041924646751,0.19871461170299,0.759729551470544,0.195551382734803,0.0801588202515337,1.06726497369676,0,0,0.114536596165916,0,0,0.124252535565433,0.471388069233591,0,0.209205692624666,0.203996435272644,0,0.600420288709789,0.684526894459965,0,0.429765441419957,0.262887354279314,1.11712960508902,0.687481272035051,0,0.199679000498991,0,1.56220020209311,0.3359173624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| ||
|short_description=p2@RNF213 | |short_description=p2@RNF213 | ||
}} | }} |
Latest revision as of 03:54, 18 September 2015
Short description: | p2@RNF213 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNF213_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000559070_5end |
EntrezGene: | RNF213 |
HGNC: | 14539 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.13e-19 | 6 |
adult endothelial progenitor cell | 1.35e-10 | 3 |
monopoietic cell | 2.99e-10 | 59 |
monocyte | 2.99e-10 | 59 |
monoblast | 2.99e-10 | 59 |
promonocyte | 2.99e-10 | 59 |
macrophage dendritic cell progenitor | 8.75e-10 | 61 |
myeloid leukocyte | 7.79e-09 | 72 |
myeloid lineage restricted progenitor cell | 9.55e-09 | 66 |
granulocyte monocyte progenitor cell | 1.47e-08 | 67 |
defensive cell | 1.67e-07 | 48 |
phagocyte | 1.67e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.75e-15 | 114 |
immune system | 1.50e-09 | 93 |
hemolymphoid system | 2.26e-08 | 108 |
bone marrow | 4.37e-08 | 76 |
hematopoietic system | 8.03e-08 | 98 |
blood island | 8.03e-08 | 98 |
brainstem | 2.73e-07 | 6 |
bone element | 3.38e-07 | 82 |
multi cell component structure | 8.46e-07 | 2 |
neuron projection bundle | 8.46e-07 | 2 |