FFCP PHASE1:Hg19::chr11:102401469..102401488,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:102401469..102401488,-
|short_description=p1@MMP7
|description=CAGE_peak_1_at_MMP7_5end
|association_with_transcript=0bp_to_ENST00000260227,ENST0000053120...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4316 | |EntrezGene=4316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7174 | |HGNC=7174 | ||
|TSSclassifier=strong | |||
|UniProt=P09237 | |UniProt=P09237 | ||
|association_with_transcript=0bp_to_ENST00000260227,ENST00000531200,ENST00000533366,NM_002423,uc001phb.2,uc009yxd.2,uc010rus.1_5end | |||
|cluster_id=chr11:102401469..102401488,- | |||
|coexpression_cluster_id=C367 | |||
|description=CAGE_peak_1_at_MMP7_5end | |||
|id=chr11:102401469..102401488,- | |||
|ontology_enrichment_celltype=CL:1000497!8.13e-13!18;CL:0002518!8.13e-13!18;CL:1000449!2.54e-11!16;CL:1000507!1.25e-09!12;CL:1000494!1.25e-09!12;CL:0002681!5.55e-09!13;CL:0002584!5.55e-09!13;CL:0000066!4.06e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:1000497;5.64e-16;17!CL:0002518;5.64e-16;17!CL:1000449;7.49e-14;15!CL:1000507;8.85e-13;10!CL:1000494;8.85e-13;10!CL:0002681;1.50e-10;12!CL:0002584;1.50e-10;12!CL:0000235;2.00e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,7.32e-16,17;CL:0002518,7.32e-16,17;CL:1000449,9.51e-14,15;CL:1000507,9.24e-13,10;CL:1000494,9.24e-13,10;CL:0002681,1.85e-10,12;CL:0002584,1.85e-10,12;CL:0000235,2.00e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000058!7.19e-14!26;UBERON:0001008!6.54e-13!45;UBERON:0006554!1.66e-12!44;UBERON:0000466!1.72e-12!126;UBERON:0000080!1.77e-12!18;UBERON:0002120!1.77e-12!18;UBERON:0004875!1.77e-12!18;UBERON:0005721!1.77e-12!18;UBERON:0005754!1.77e-12!18;UBERON:0007297!1.77e-12!18;UBERON:0006555!4.70e-12!17;UBERON:0005103!4.70e-12!17;UBERON:0000083!4.70e-12!17;UBERON:0009201!4.70e-12!17;UBERON:0004819!4.70e-12!17;UBERON:0006553!4.70e-12!17;UBERON:0003074!4.70e-12!17;UBERON:0003060!4.70e-12!17;UBERON:0004876!5.86e-12!20;UBERON:0002113!6.32e-12!27;UBERON:0003918!6.32e-12!27;UBERON:0005095!6.32e-12!27;UBERON:0007687!6.32e-12!27;UBERON:0003887!1.90e-11!21;UBERON:0002553!2.46e-11!70;UBERON:0004211!2.54e-11!16;UBERON:0001285!2.54e-11!16;UBERON:0007684!2.54e-11!16;UBERON:0003220!2.54e-11!16;UBERON:0004208!2.54e-11!16;UBERON:0000489!4.87e-11!32;UBERON:0000464!2.13e-10!104;UBERON:0003064!3.74e-10!37;UBERON:0005172!8.51e-10!55;UBERON:0005173!8.51e-10!55;UBERON:0009773!1.25e-09!12;UBERON:0001231!1.25e-09!12;UBERON:0004810!1.25e-09!12;UBERON:0002417!1.36e-09!61;UBERON:0000916!1.36e-09!61;UBERON:0001225!5.55e-09!13;UBERON:0008987!5.55e-09!13;UBERON:0003886!7.68e-09!63;UBERON:0000062!8.47e-09!511;UBERON:0000077!3.95e-08!130;UBERON:0004921!4.68e-08!129;UBERON:0004185!4.68e-08!129;UBERON:0005177!5.89e-08!107;UBERON:0000468!7.24e-08!659;UBERON:0000926!1.46e-07!448;UBERON:0004120!1.46e-07!448;UBERON:0006603!1.46e-07!448;UBERON:0000467!1.60e-07!625;UBERON:0009569!1.86e-07!113;UBERON:0000480!2.06e-07!626;UBERON:0000922!2.54e-07!612;UBERON:0003104!2.79e-07!238;UBERON:0009142!2.79e-07!238;UBERON:0004119!5.02e-07!169;UBERON:0000925!5.02e-07!169;UBERON:0006595!5.02e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.95e-14;30!UBERON:0001008;1.95e-14;30!UBERON:0006555;7.49e-14;15!UBERON:0004819;7.49e-14;15!UBERON:0001285;7.49e-14;15!UBERON:0007684;7.49e-14;15!UBERON:0002113;3.67e-13;24!UBERON:0011143;3.67e-13;24!UBERON:0004211;8.85e-13;10!UBERON:0009773;8.85e-13;10!UBERON:0001231;8.85e-13;10!UBERON:0004810;8.85e-13;10!UBERON:0000489;1.02e-12;29!UBERON:0001225;1.50e-10;12!UBERON:0008987;1.50e-10;12!UBERON:0001851;8.13e-08;15!UBERON:0000353;8.13e-08;15!UBERON:0001044;2.74e-07;6!UBERON:0003293;2.74e-07;6!UBERON:0003294;2.74e-07;6!UBERON:0010047;2.74e-07;6!UBERON:0003408;2.74e-07;6!UBERON:0000167;2.74e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006555,8.74e-15,16;UBERON:0004819,8.74e-15,16;UBERON:0002113,1.18e-14,26;UBERON:0003918,1.18e-14,26;UBERON:0011143,1.18e-14,26;UBERON:0005095,1.18e-14,26;UBERON:0007687,1.18e-14,26;UBERON:0000489,3.64e-14,31;UBERON:0004211,9.51e-14,15;UBERON:0009773,9.51e-14,15;UBERON:0001231,9.51e-14,15;UBERON:0001285,9.51e-14,15;UBERON:0007684,9.51e-14,15;UBERON:0004208,9.51e-14,15;UBERON:0001008,4.32e-13,48;UBERON:0004810,9.24e-13,10;UBERON:0006554,1.44e-12,47;UBERON:0005177,8.60e-11,101;UBERON:0001225,1.85e-10,12;UBERON:0008987,1.85e-10,12;UBERON:0005172,8.47e-09,54;UBERON:0005173,8.47e-09,54;UBERON:0002417,1.48e-08,60;UBERON:0000916,1.48e-08,60;UBERON:0001851,9.53e-08,15;UBERON:0000353,9.53e-08,15;UBERON:0009569,1.12e-07,112;UBERON:0000058,1.83e-07,19;UBERON:0001044,2.66e-07,6;UBERON:0003293,2.66e-07,6;UBERON:0003294,2.66e-07,6;UBERON:0010047,2.66e-07,6;UBERON:0000167,2.66e-07,6;UBERON:0002553,2.75e-07,61 | |||
|phase1_expression=0.54503513781167,0.428201047781966,2.53717927372748,4.00293193412522,0.446961094427288,60.1913581629254,5.06599756336621,0,0,5.16041266653169,2.09340350391728,0,0,0,0,43.0288093729136,0,0,0,0.492484232307152,0.204000691244253,1.56727360739044,2.28988789704845,2.6006140763848,7.78364365487777,59.2203894546622,57.6346137938619,57.4588703589858,0,0,0,0,0,0,0,0,0,0,0,0,1.34349284543955,1.6194683300949,0.515151135268373,0,0.377875943688809,0,0,0.822335776043652,2.16794459626573,0,0.256160706529101,0.709446689665756,0.344745680736619,1.29096936716765,5.41705946377367,0,0.818718450173537,1.12361742222542,0,0.641858054152187,1.27867425159808,0,0,0,4.06292934080018,11.3477044938228,18.6846674698673,0.502497330513487,1.0429658368404,0.65156653411535,10.2917915447673,8.47038562771399,20.2535927962166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,1.45990461090791,0.472674085820339,0.443458794925128,1.22968699970376,26.3267941750402,0,0,0.97364218096405,1.0447784237956,35.499775458537,0,0,0,0,0,1.38856200643038,0,0,0,0,0,0,0.66944122552934,0,0,0,0,7.29127753093584,0,0.44905874525234,0.225222960966644,6.13266549863533,0,0.916008719652036,0,0,0.436094052142534,0,0,0.132409180813219,0,19.861429403108,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0,0,0.355009592516614,0.201504196455281,0,0.386521706326594,1.36373060295417,0.286804595389004,0.487894824518382,0,0.116193942869518,3.42081481550722,0,0,1.56449532329816,0,0,4.17931135228781,0,0.118306800039844,0.168584690078102,0,0,0.435758888184812,0.237270619111097,0.269662616320329,0.392442930250692,0,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,1.18157981336281,0,8.24022538238861,0,9.10927368891592,0,0,0,0,0,1.44331342025273,38.1411032368003,0.117408694235822,0.433099343283221,0,0.570762456703795,0,0,211.254191222987,749.749665506118,1779.85816840752,0,0.503946384596579,3.40260233381728,0.895585227028483,0,0,0,0,5.39053100406007,7.35011762426503,5.80715193761348,0.063497894292169,0,0,5.13217338068116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.602878754119172,0.871533458600294,0.599837947092342,46.2170366436524,7.5338563714819,50.6001454759276,0,0,0,1.15825045334063,3.28762116080613,3.58121926479791,0,0,0,0,9.90969034467607,7.8083912314573,14.6924874427762,8.37581326671744,23.603733811167,0,0,0,0,0,0,0,0,0,0,2.10662269809403,0,1.03473071292505,0,0,0,0.979005787313703,0.343143423810856,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,77.1773945513953,0,0,0,0,0,0.846016147141356,26.2663476097303,0.368323955743585,0,0,0.262248829918848,115.05590129139,140.78403622687,10.1965469992991,257.205035389739,808.947683834999,1.13733384070897,0.850468526382578,2.59099099322567,9.25363516141736,6.23176806350862,106.358232057229,149.867248550483,77.2900688303714,24.1784735099953,0,0,0,0,0,6.80070676874967,0,0,0,0,0,0,0,0,0,0.322260734604821,0.145016693914229,0.93749290157711,0,0.826424576804891,0,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,2.00374841438788,0.744316738719335,1.58189712359363,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,2.478587984798,0,0,0,0,0,1.26664581178598,0,0,0,0,7.37332503089366,0,6.21349085126742,0,1.68471475667626,1.33029046061003,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.6177416559565,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0.935702702041099,21.6832105322403,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,3.86797481743607,0,0.409074730008619,281.98728931131,0,94.7212421092825,17.0070115941829,0,7.99011585659162,0,0,0,0.0927680981618513,0,0,0,99.3249418345667,0.796554137998498,10.9329069625889,0,0,0,0,0,0,0,0,0,0,0,0,17.1599076463467,0.113942055847001,0,0,0,6.69902435437031,116.328943620365,12.7928346244472,0,0,0,0,0,0,0,0,2.74297483886435,1014.98160113358,0.848118428603645,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,4.69595085437015,0,5.12959723704208,9.67925728389311,0.30607276163049,2.78020950365347,0.450970258243478,0,0,0,0,0,517.704764228193,0,0,8.62333097246523,6.09414446062818,34.4211536436799,0,0,0.0730893170861856,0,4.46149475846729,0,11.0730562982461,0.137041924646751,0,0,0,193.102597985945,270.44494433476,2.59752492456769,0.576361668616424,0.114536596165916,0,0,0,0,0,0,0.203996435272644,0,0,0,1.27746588066972,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,16.0436794869041,0,0,0,0,0,0,1.349843349309,0,0,0.335434687599266,374.248303963892,43.1176714469684,0,0,1.15149118391667,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,2.78449243988357,1.32506888912221,0.129282956361551,0,56.11648282606,1.40963004463334,14.8434503469096,71.2135502101487,14.912605992499,1.9846640872478,0,0.121792598380896,5.10673006216145,1.08803560673895,2.0055191521816,4.28883807468846,0.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|phase1_expression=0.54503513781167,0.428201047781966,2.53717927372748,4.00293193412522,0.446961094427288,60.1913581629254,5.06599756336621,0,0,5.16041266653169,2.09340350391728,0,0,0,0,43.0288093729136,0,0,0,0.492484232307152,0.204000691244253,1.56727360739044,2.28988789704845,2.6006140763848,7.78364365487777,59.2203894546622,57.6346137938619,57.4588703589858,0,0,0,0,0,0,0,0,0,0,0,0,1.34349284543955,1.6194683300949,0.515151135268373,0,0.377875943688809,0,0,0.822335776043652,2.16794459626573,0,0.256160706529101,0.709446689665756,0.344745680736619,1.29096936716765,5.41705946377367,0,0.818718450173537,1.12361742222542,0,0.641858054152187,1.27867425159808,0,0,0,4.06292934080018,11.3477044938228,18.6846674698673,0.502497330513487,1.0429658368404,0.65156653411535,10.2917915447673,8.47038562771399,20.2535927962166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,1.45990461090791,0.472674085820339,0.443458794925128,1.22968699970376,26.3267941750402,0,0,0.97364218096405,1.0447784237956,35.499775458537,0,0,0,0,0,1.38856200643038,0,0,0,0,0,0,0.66944122552934,0,0,0,0,7.29127753093584,0,0.44905874525234,0.225222960966644,6.13266549863533,0,0.916008719652036,0,0,0.436094052142534,0,0,0.132409180813219,0,19.861429403108,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0,0,0.355009592516614,0.201504196455281,0,0.386521706326594,1.36373060295417,0.286804595389004,0.487894824518382,0,0.116193942869518,3.42081481550722,0,0,1.56449532329816,0,0,4.17931135228781,0,0.118306800039844,0.168584690078102,0,0,0.435758888184812,0.237270619111097,0.269662616320329,0.392442930250692,0,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,1.18157981336281,0,8.24022538238861,0,9.10927368891592,0,0,0,0,0,1.44331342025273,38.1411032368003,0.117408694235822,0.433099343283221,0,0.570762456703795,0,0,211.254191222987,749.749665506118,1779.85816840752,0,0.503946384596579,3.40260233381728,0.895585227028483,0,0,0,0,5.39053100406007,7.35011762426503,5.80715193761348,0.063497894292169,0,0,5.13217338068116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.602878754119172,0.871533458600294,0.599837947092342,46.2170366436524,7.5338563714819,50.6001454759276,0,0,0,1.15825045334063,3.28762116080613,3.58121926479791,0,0,0,0,9.90969034467607,7.8083912314573,14.6924874427762,8.37581326671744,23.603733811167,0,0,0,0,0,0,0,0,0,0,2.10662269809403,0,1.03473071292505,0,0,0,0.979005787313703,0.343143423810856,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,77.1773945513953,0,0,0,0,0,0.846016147141356,26.2663476097303,0.368323955743585,0,0,0.262248829918848,115.05590129139,140.78403622687,10.1965469992991,257.205035389739,808.947683834999,1.13733384070897,0.850468526382578,2.59099099322567,9.25363516141736,6.23176806350862,106.358232057229,149.867248550483,77.2900688303714,24.1784735099953,0,0,0,0,0,6.80070676874967,0,0,0,0,0,0,0,0,0,0.322260734604821,0.145016693914229,0.93749290157711,0,0.826424576804891,0,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,2.00374841438788,0.744316738719335,1.58189712359363,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,2.478587984798,0,0,0,0,0,1.26664581178598,0,0,0,0,7.37332503089366,0,6.21349085126742,0,1.68471475667626,1.33029046061003,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.6177416559565,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0.935702702041099,21.6832105322403,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,3.86797481743607,0,0.409074730008619,281.98728931131,0,94.7212421092825,17.0070115941829,0,7.99011585659162,0,0,0,0.0927680981618513,0,0,0,99.3249418345667,0.796554137998498,10.9329069625889,0,0,0,0,0,0,0,0,0,0,0,0,17.1599076463467,0.113942055847001,0,0,0,6.69902435437031,116.328943620365,12.7928346244472,0,0,0,0,0,0,0,0,2.74297483886435,1014.98160113358,0.848118428603645,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,4.69595085437015,0,5.12959723704208,9.67925728389311,0.30607276163049,2.78020950365347,0.450970258243478,0,0,0,0,0,517.704764228193,0,0,8.62333097246523,6.09414446062818,34.4211536436799,0,0,0.0730893170861856,0,4.46149475846729,0,11.0730562982461,0.137041924646751,0,0,0,193.102597985945,270.44494433476,2.59752492456769,0.576361668616424,0.114536596165916,0,0,0,0,0,0,0.203996435272644,0,0,0,1.27746588066972,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,16.0436794869041,0,0,0,0,0,0,1.349843349309,0,0,0.335434687599266,374.248303963892,43.1176714469684,0,0,1.15149118391667,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,2.78449243988357,1.32506888912221,0.129282956361551,0,56.11648282606,1.40963004463334,14.8434503469096,71.2135502101487,14.912605992499,1.9846640872478,0,0.121792598380896,5.10673006216145,1.08803560673895,2.0055191521816,4.28883807468846,0.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| ||
|short_description=p1@MMP7 | |||
}} | }} |
Latest revision as of 17:45, 24 September 2015
Short description: | p1@MMP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MMP7_5end |
Coexpression cluster: | C367_papillotubular_Macrophage_clear_pharyngeal_Renal_endometrial_tubular |
Association with transcript: | 0bp_to_ENST00000260227, ENST00000531200, ENST00000533366, NM_002423, uc001phb.2, uc009yxd.2, uc010rus.1_5end |
EntrezGene: | MMP7 |
HGNC: | 7174 |
UniProt: | P09237 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 7.32e-16 | 17 |
kidney epithelial cell | 7.32e-16 | 17 |
epithelial cell of nephron | 9.51e-14 | 15 |
kidney tubule cell | 9.24e-13 | 10 |
nephron tubule epithelial cell | 9.24e-13 | 10 |
kidney cortical cell | 1.85e-10 | 12 |
renal cortical epithelial cell | 1.85e-10 | 12 |
macrophage | 2.00e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
excretory tube | 8.74e-15 | 16 |
kidney epithelium | 8.74e-15 | 16 |
kidney | 1.18e-14 | 26 |
kidney mesenchyme | 1.18e-14 | 26 |
upper urinary tract | 1.18e-14 | 26 |
kidney rudiment | 1.18e-14 | 26 |
kidney field | 1.18e-14 | 26 |
cavitated compound organ | 3.64e-14 | 31 |
nephron epithelium | 9.51e-14 | 15 |
renal tubule | 9.51e-14 | 15 |
nephron tubule | 9.51e-14 | 15 |
nephron | 9.51e-14 | 15 |
uriniferous tubule | 9.51e-14 | 15 |
nephrogenic mesenchyme | 9.51e-14 | 15 |
renal system | 4.32e-13 | 48 |
nephron tubule epithelium | 9.24e-13 | 10 |
urinary system structure | 1.44e-12 | 47 |
trunk region element | 8.60e-11 | 101 |
cortex of kidney | 1.85e-10 | 12 |
renal parenchyma | 1.85e-10 | 12 |
abdomen element | 8.47e-09 | 54 |
abdominal segment element | 8.47e-09 | 54 |
abdominal segment of trunk | 1.48e-08 | 60 |
abdomen | 1.48e-08 | 60 |
cortex | 9.53e-08 | 15 |
parenchyma | 9.53e-08 | 15 |
subdivision of trunk | 1.12e-07 | 112 |
duct | 1.83e-07 | 19 |
saliva-secreting gland | 2.66e-07 | 6 |
gland of oral region | 2.66e-07 | 6 |
gland of foregut | 2.66e-07 | 6 |
oral gland | 2.66e-07 | 6 |
oral cavity | 2.66e-07 | 6 |
anatomical cavity | 2.75e-07 | 61 |