FFCP PHASE1:Hg19::chr17:80477643..80477678,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3607 | |EntrezGene=3607 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6036 | |HGNC=6036 | ||
|TSSclassifier=strong | |||
|UniProt=Q01167 | |UniProt=Q01167 | ||
|association_with_transcript=49bp_to_ENST00000335241,NM_004514,uc002kfm.1,uc002kfn.2,uc010diu.2_5end | |association_with_transcript=49bp_to_ENST00000335241,NM_004514,uc002kfm.1,uc002kfn.2,uc010diu.2_5end | ||
|cluster_id=chr17:80477643..80477678,+ | |||
|description=CAGE_peak_2_at_FOXK2_5end | |description=CAGE_peak_2_at_FOXK2_5end | ||
|id=chr17:80477643..80477678,+ | |id=chr17:80477643..80477678,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.27e-18!254;CL:0000220!2.05e-07!246;CL:0002321!3.27e-07!248;CL:0000223!5.56e-07!59 | |ontology_enrichment_celltype=CL:0000066!4.27e-18!254;CL:0000220!2.05e-07!246;CL:0002321!3.27e-07!248;CL:0000223!5.56e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.71e-18,253;CL:0002321,2.57e-07,250;CL:0000223,3.69e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.05e-08!235;DOID:14566!3.78e-08!239;DOID:305!9.54e-08!106;DOID:0050687!2.17e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.08e-08,235;DOID:14566,3.83e-08,239;DOID:305,9.68e-08,106;DOID:0050687,2.19e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004121!5.46e-12!169;UBERON:0000064!7.61e-12!219;UBERON:0000924!3.53e-11!173;UBERON:0006601!3.53e-11!173;UBERON:0004111!2.00e-09!241;UBERON:0000477!2.15e-09!286;UBERON:0000119!5.66e-09!312;UBERON:0000033!7.15e-09!123;UBERON:0001004!8.20e-09!72;UBERON:0000153!1.13e-08!129;UBERON:0007811!1.13e-08!129;UBERON:0000955!1.16e-08!69;UBERON:0006238!1.16e-08!69;UBERON:0000073!1.17e-08!94;UBERON:0001016!1.17e-08!94;UBERON:0000481!1.42e-08!347;UBERON:0000483!1.48e-08!309;UBERON:0000475!3.02e-08!365;UBERON:0001017!7.60e-08!82;UBERON:0001049!1.14e-07!57;UBERON:0005068!1.14e-07!57;UBERON:0006241!1.14e-07!57;UBERON:0007135!1.14e-07!57;UBERON:0005743!1.17e-07!86;UBERON:0000063!1.49e-07!97;UBERON:0000072!3.23e-07!46;UBERON:0001041!3.39e-07!98;UBERON:0000065!4.63e-07!53;UBERON:0003075!7.06e-07!86;UBERON:0007284!7.06e-07!86;UBERON:0000025!8.66e-07!194;UBERON:0008947!9.72e-07!38;UBERON:0003258!9.72e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;8.24e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,3.51e-13,223;UBERON:0004121,3.31e-11,171;UBERON:0000924,3.31e-11,171;UBERON:0006601,3.31e-11,171;UBERON:0010371,4.32e-10,104;UBERON:0004111,3.15e-09,240;UBERON:0000119,1.23e-08,309;UBERON:0001016,1.30e-08,89;UBERON:0000955,2.10e-08,68;UBERON:0006238,2.10e-08,68;UBERON:0001004,2.72e-08,74;UBERON:0000483,3.15e-08,306;UBERON:0001041,7.89e-08,87;UBERON:0001017,1.32e-07,81;UBERON:0000073,1.67e-07,53;UBERON:0002616,1.67e-07,53;UBERON:0001049,2.07e-07,56;UBERON:0005068,2.07e-07,56;UBERON:0006241,2.07e-07,56;UBERON:0007135,2.07e-07,56;UBERON:0004921,5.76e-07,118;UBERON:0000072,6.54e-07,47;UBERON:0000065,8.71e-07,54;UBERON:0008947,9.72e-07,38;UBERON:0003258,9.72e-07,38;UBERON:0000025,9.88e-07,192 | |||
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| ||
|short_description=p2@FOXK2 | |short_description=p2@FOXK2 | ||
}} | }} |
Latest revision as of 12:59, 18 September 2015
Short description: | p2@FOXK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_ENST00000335241, NM_004514, uc002kfm.1, uc002kfn.2, uc010diu.2_5end |
EntrezGene: | FOXK2 |
HGNC: | 6036 |
UniProt: | Q01167 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.71e-18 | 253 |
embryonic cell | 2.57e-07 | 250 |
endodermal cell | 3.69e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 3.51e-13 | 223 |
ectoderm-derived structure | 3.31e-11 | 171 |
ectoderm | 3.31e-11 | 171 |
presumptive ectoderm | 3.31e-11 | 171 |
ecto-epithelium | 4.32e-10 | 104 |
anatomical conduit | 3.15e-09 | 240 |
cell layer | 1.23e-08 | 309 |
nervous system | 1.30e-08 | 89 |
brain | 2.10e-08 | 68 |
future brain | 2.10e-08 | 68 |
respiratory system | 2.72e-08 | 74 |
epithelium | 3.15e-08 | 306 |
foregut | 7.89e-08 | 87 |
central nervous system | 1.32e-07 | 81 |
regional part of nervous system | 1.67e-07 | 53 |
regional part of brain | 1.67e-07 | 53 |
neural tube | 2.07e-07 | 56 |
neural rod | 2.07e-07 | 56 |
future spinal cord | 2.07e-07 | 56 |
neural keel | 2.07e-07 | 56 |
subdivision of digestive tract | 5.76e-07 | 118 |
segment of respiratory tract | 6.54e-07 | 47 |
respiratory tract | 8.71e-07 | 54 |
respiratory primordium | 9.72e-07 | 38 |
endoderm of foregut | 9.72e-07 | 38 |
tube | 9.88e-07 | 192 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.08e-08 | 235 |
disease of cellular proliferation | 3.83e-08 | 239 |
carcinoma | 9.68e-08 | 106 |
cell type cancer | 2.19e-07 | 143 |