FFCP PHASE1:Hg19::chr12:8975964..8975974,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144568 | |EntrezGene=144568 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23336 | |HGNC=23336 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-134bp_to_ENST00000537546_5end | |association_with_transcript=-134bp_to_ENST00000537546_5end | ||
|cluster_id=chr12:8975964..8975974,+ | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_8_at_A2ML1_5end | |description=CAGE_peak_8_at_A2ML1_5end | ||
|id=chr12:8975964..8975974,+ | |id=chr12:8975964..8975974,+ | ||
|ontology_enrichment_celltype=CL:0000039!6.69e-18!7;CL:0000586!6.69e-18!7 | |ontology_enrichment_celltype=CL:0000039!6.69e-18!7;CL:0000586!6.69e-18!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.65e-15;7!CL:0000586;1.65e-15;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.65e-15,7;CL:0000586,1.65e-15,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.00e-40;10!UBERON:0005564;2.00e-40;10 | |||
|ontology_enrichment_disease=DOID:3095!1.24e-07!22;DOID:2994!1.24e-07!22 | |ontology_enrichment_disease=DOID:3095!1.24e-07!22;DOID:2994!1.24e-07!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.29e-31!57;UBERON:0005068!1.29e-31!57;UBERON:0006241!1.29e-31!57;UBERON:0007135!1.29e-31!57;UBERON:0002780!1.72e-25!41;UBERON:0001890!1.72e-25!41;UBERON:0006240!1.72e-25!41;UBERON:0003080!8.16e-25!42;UBERON:0000473!2.58e-22!8;UBERON:0002616!1.52e-21!59;UBERON:0002346!1.90e-20!90;UBERON:0001017!2.50e-20!82;UBERON:0001893!4.78e-20!34;UBERON:0003075!1.84e-19!86;UBERON:0007284!1.84e-19!86;UBERON:0005743!3.47e-19!86;UBERON:0007023!1.30e-18!115;UBERON:0002791!1.26e-17!33;UBERON:0000955!1.42e-17!69;UBERON:0006238!1.42e-17!69;UBERON:0000073!5.83e-17!94;UBERON:0001016!5.83e-17!94;UBERON:0003056!4.11e-16!61;UBERON:0003135!4.61e-16!11;UBERON:0002240!6.63e-16!3;UBERON:0001869!6.20e-15!32;UBERON:0002020!3.80e-14!34;UBERON:0003528!3.80e-14!34;UBERON:0000153!1.54e-12!129;UBERON:0007811!1.54e-12!129;UBERON:0000033!5.36e-12!123;UBERON:0002619!9.82e-12!22;UBERON:0000924!3.04e-10!173;UBERON:0006601!3.04e-10!173;UBERON:0000956!3.05e-10!25;UBERON:0000203!3.05e-10!25;UBERON:0001950!6.78e-10!20;UBERON:0005174!9.98e-10!5;UBERON:0001137!9.98e-10!5;UBERON:0004121!1.64e-09!169;UBERON:0002021!4.19e-09!5;UBERON:0000991!4.19e-08!21;UBERON:0009196!4.19e-08!21;UBERON:0009117!4.19e-08!21;UBERON:0005564!4.19e-08!21;UBERON:0003076!5.94e-08!15;UBERON:0003057!5.94e-08!15;UBERON:0004176!1.05e-07!22;UBERON:0003101!1.05e-07!22;UBERON:0000079!1.05e-07!22;UBERON:0001894!5.35e-07!7;UBERON:0006222!5.35e-07!7;UBERON:0000025!5.99e-07!194;UBERON:0009663!7.11e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.99e-50;8!UBERON:0003135;6.80e-37;11!UBERON:0000991;4.86e-20;21!UBERON:0003101;3.41e-19;22!UBERON:0000079;3.41e-19;22!UBERON:0003133;1.52e-08;44!UBERON:0002553;1.91e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.99e-50,8;UBERON:0003135,6.80e-37,11;UBERON:0000991,4.86e-20,21;UBERON:0009196,4.86e-20,21;UBERON:0009117,4.86e-20,21;UBERON:0005564,4.86e-20,21;UBERON:0004176,3.41e-19,22;UBERON:0003101,3.41e-19,22;UBERON:0000079,3.41e-19,22;UBERON:0002323,7.07e-10,46;UBERON:0003133,1.62e-09,48;UBERON:0004458,2.38e-09,49;UBERON:0003886,1.34e-08,54;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59;UBERON:0002553,9.44e-08,61 | |||
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|short_description=p8@A2ML1 | |short_description=p8@A2ML1 | ||
}} | }} |
Latest revision as of 07:15, 25 September 2015
Short description: | p8@A2ML1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_A2ML1_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -134bp_to_ENST00000537546_5end |
EntrezGene: | A2ML1 |
HGNC: | 23336 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.65e-15 | 7 |
germ cell | 1.65e-15 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 3.99e-50 | 8 |
male reproductive organ | 6.80e-37 | 11 |
gonad | 4.86e-20 | 21 |
indifferent external genitalia | 4.86e-20 | 21 |
indifferent gonad | 4.86e-20 | 21 |
gonad primordium | 4.86e-20 | 21 |
external genitalia | 3.41e-19 | 22 |
male organism | 3.41e-19 | 22 |
male reproductive system | 3.41e-19 | 22 |
body cavity | 7.07e-10 | 46 |
reproductive organ | 1.62e-09 | 48 |
body cavity or lining | 2.38e-09 | 49 |
body cavity precursor | 1.34e-08 | 54 |
reproductive structure | 5.66e-08 | 59 |
reproductive system | 5.66e-08 | 59 |
anatomical cavity | 9.44e-08 | 61 |