FFCP PHASE1:Hg19::chr12:92028700..92028705,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:92028700..92028705,+ | |||
|description=CAGE_peak_at_chr12:92028700..92028705,+ | |description=CAGE_peak_at_chr12:92028700..92028705,+ | ||
|id=chr12:92028700..92028705,+ | |id=chr12:92028700..92028705,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.41e-09;3!CL:0000167;2.70e-08;1!CL:0000164;2.70e-08;1!CL:0000502;2.70e-08;1!CL:0000172;2.70e-08;1!CL:0000173;2.70e-08;1!CL:0000946;1.59e-07;1!CL:0000786;1.59e-07;1!CL:0000163;3.18e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.57e-09,3;CL:0000167,2.70e-08,1;CL:0000164,2.70e-08,1;CL:0000502,2.70e-08,1;CL:0000172,2.70e-08,1;CL:0000173,2.70e-08,1;CL:0002351,2.70e-08,1;CL:0000946,1.99e-07,1;CL:0000786,1.99e-07,1;CL:0000980,1.99e-07,1;CL:0000163,3.15e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002351;2.70e-08;1!UBERON:0003124;1.04e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;1.02e-13;8!DOID:4430;2.70e-08;1!DOID:0050619;2.89e-08;1!DOID:1357;2.89e-08;1!DOID:1799;6.74e-08;1!DOID:10165;6.74e-08;1!DOID:1798;6.74e-08;1!DOID:0060085;1.04e-07;1!DOID:3165;1.04e-07;1!DOID:0060121;1.04e-07;1!DOID:2438;1.04e-07;1!DOID:4418;1.04e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.00e-13,8;DOID:4430,2.70e-08,1;DOID:0050619,2.89e-08,1;DOID:1357,2.89e-08,1;DOID:1799,6.52e-08,1;DOID:10165,6.52e-08,1;DOID:1798,6.52e-08,1;DOID:0060085,9.10e-08,1;DOID:3165,9.10e-08,1;DOID:0060121,9.10e-08,1;DOID:2438,9.10e-08,1;DOID:4418,9.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.55e-10!115;UBERON:0003124!8.74e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.63e-14;2!UBERON:0002757;2.63e-14;2!UBERON:0010134;2.63e-14;2!UBERON:0005408;2.63e-14;2!UBERON:0001899;2.63e-14;2!UBERON:0003124;1.41e-09;3!UBERON:0000920;1.41e-09;3!UBERON:0001764;2.89e-08;1!UBERON:0001825;2.89e-08;1!UBERON:0001282;1.04e-07;1!UBERON:0009842;1.04e-07;1!UBERON:0003704;1.04e-07;1!UBERON:0001171;1.04e-07;1!UBERON:0001172;1.04e-07;1!UBERON:0000473;1.08e-07;8!UBERON:0003296;1.40e-07;4!UBERON:0010133;1.40e-07;4!UBERON:0002784;1.40e-07;4!UBERON:0001987;3.28e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,8.76e-15,7;UBERON:0001905,2.63e-14,2;UBERON:0002757,2.63e-14,2;UBERON:0010134,2.63e-14,2;UBERON:0005408,2.63e-14,2;UBERON:0001899,2.63e-14,2;UBERON:0005631,3.16e-11,14;UBERON:0000158,3.16e-11,14;UBERON:0000920,1.57e-09,3;UBERON:0001764,2.89e-08,1;UBERON:0001825,2.89e-08,1;UBERON:0000473,1.02e-07,8;UBERON:0001282,1.18e-07,1;UBERON:0009842,1.18e-07,1;UBERON:0003704,1.18e-07,1;UBERON:0001171,1.18e-07,1;UBERON:0001172,1.18e-07,1;UBERON:0003296,1.40e-07,4;UBERON:0010133,1.40e-07,4;UBERON:0002784,1.40e-07,4;UBERON:0001987,3.03e-07,4;UBERON:0004340,3.03e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0.821127996921047,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94130590316755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0.247528499761764,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,1.33732061132974,0,2.62618933211459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,0.0769502585037971,2.16489906109302,0,0,0.108647371922008,16.5880603060598,0.274792780205587,1.06606955203727,0,0,0.166211681900156,23.4619487041868,8.4306889756628,12.4187974362124,21.8216792632813,0.158936578980379,0,0.163232808159148,0,0,0.995261931078505,0,0,0.593042257361244,0,0,0.134802265961354,0,0,0,0.586993856796269,0,0.789168805698781,0,0,0,36.6789143371362,0.103688191397247,0,0,0,0,0.853828638089378,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,2.78200456384186,0.0633107959558787,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0,0,0,7.70685364401983,0,0,0,0.5013797880454,0,0,38.9494158700581,0,0,0,0,0.332787154610557,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.09003287710674,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0.531459361253452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39241355481392,0.0752103283492573,0,0,4.7143205006656,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,22.499477106888,3.69912094440706,0,0,2.57236873471653,1.03710588800201,0,0,0,0.236387681767936,0,0.313972371402056,0,0,0,0.431855182437243,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0.111855431797792,0,0,0,0,0,0,0,0,19.859655159854,0,0,0,0,0,0,0.245148321753905,49.0207217971382,0.392616934229891,0.297046400327086,0.4226557275834,0,0.0939839179798536,0,0,0,4.2347384605883,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0.126166424835079,0,5.95482954753754,0,0,0,1.50424523575425,3.56159881625725,2.67964130156179,0,0.103432995861895,0,0,0.258355639344024,0.0620747142958579,0,0,0,0,0,0.202056159043763,0.215166616178029,0,0,0,0,0,0,0.366724332548599,0,0,0,0 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| ||
|short_description=p@chr12:92028700..92028705,+ | |short_description=p@chr12:92028700..92028705,+ | ||
}} | }} |
Latest revision as of 13:30, 24 July 2015
Short description: | p@chr12:92028700..92028705, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:92028700..92028705, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.57e-09 | 3 |
peptide hormone secreting cell | 2.70e-08 | 1 |
enteroendocrine cell | 2.70e-08 | 1 |
type D enteroendocrine cell | 2.70e-08 | 1 |
somatostatin secreting cell | 2.70e-08 | 1 |
pancreatic D cell | 2.70e-08 | 1 |
progenitor cell of endocrine pancreas | 2.70e-08 | 1 |
antibody secreting cell | 1.99e-07 | 1 |
plasma cell | 1.99e-07 | 1 |
plasmablast | 1.99e-07 | 1 |
endocrine cell | 3.15e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
chorion | 8.76e-15 | 7 |
pineal body | 2.63e-14 | 2 |
regional part of epithalamus | 2.63e-14 | 2 |
secretory circumventricular organ | 2.63e-14 | 2 |
circumventricular organ | 2.63e-14 | 2 |
epithalamus | 2.63e-14 | 2 |
extraembryonic membrane | 3.16e-11 | 14 |
membranous layer | 3.16e-11 | 14 |
egg chorion | 1.57e-09 | 3 |
maxillary sinus | 2.89e-08 | 1 |
paranasal sinus | 2.89e-08 | 1 |
testis | 1.02e-07 | 8 |
intralobular bile duct | 1.18e-07 | 1 |
acinus | 1.18e-07 | 1 |
intrahepatic bile duct | 1.18e-07 | 1 |
portal lobule | 1.18e-07 | 1 |
hepatic acinus | 1.18e-07 | 1 |
gland of diencephalon | 1.40e-07 | 4 |
neuroendocrine gland | 1.40e-07 | 4 |
regional part of diencephalon | 1.40e-07 | 4 |
placenta | 3.03e-07 | 4 |
allantois | 3.03e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.00e-13 | 8 |
somatostatinoma | 2.70e-08 | 1 |
paranasal sinus cancer | 2.89e-08 | 1 |
maxillary sinus cancer | 2.89e-08 | 1 |
islet cell tumor | 6.52e-08 | 1 |
endocrine pancreas cancer | 6.52e-08 | 1 |
pancreatic endocrine carcinoma | 6.52e-08 | 1 |
organ system benign neoplasm | 9.10e-08 | 1 |
skin benign neoplasm | 9.10e-08 | 1 |
integumentary system benign neoplasm | 9.10e-08 | 1 |
dermis tumor | 9.10e-08 | 1 |
cutaneous fibrous histiocytoma | 9.10e-08 | 1 |