FFCP PHASE1:Hg19::chr11:111225158..111225201,+: Difference between revisions
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|id=chr11:111225158..111225201,+
|short_description=p1@CU689419
|description=CAGE_peak_1_at_CU689419_5end
|association_with_transcript=171bp_to_CU689419_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=171bp_to_CU689419_5end | |||
|cluster_id=chr11:111225158..111225201,+ | |||
|coexpression_cluster_id=C442 | |||
|description=CAGE_peak_1_at_CU689419_5end | |||
|id=chr11:111225158..111225201,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.86e-43!24;CL:0000826!1.86e-43!24;CL:0000542!2.24e-25!53;CL:0000051!2.24e-25!53;CL:0000838!8.94e-24!52;CL:0000236!3.53e-20!14;CL:0000817!8.67e-09!3;CL:0002087!1.00e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000945;7.20e-105;24!CL:0000236;3.26e-38;13!CL:0000542;5.23e-29;53!CL:0000785;2.70e-08;1!CL:0000819;2.70e-08;1!CL:0002087;3.08e-08;104!CL:0000946;5.51e-08;1!CL:0000786;5.51e-08;1!CL:0000817;9.10e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.41e-105,24;CL:0000826,7.41e-105,24;CL:0000542,3.76e-50,53;CL:0000051,3.76e-50,53;CL:0000838,2.70e-46,52;CL:0000236,7.01e-44,14;CL:0002087,1.19e-20,115;CL:0000817,1.26e-20,3;CL:0002031,1.32e-17,120;CL:0000738,7.71e-17,136;CL:0000785,1.44e-14,2;CL:0000955,1.44e-14,2;CL:0000818,1.44e-14,2;CL:0000954,1.44e-14,2;CL:0000816,1.44e-14,2;CL:0002032,1.37e-13,161;CL:0000837,1.37e-13,161;CL:0000037,7.49e-13,168;CL:0000988,5.46e-12,177;CL:0000819,2.70e-08,1;CL:0000946,5.70e-08,1;CL:0000786,5.70e-08,1;CL:0000980,5.70e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;5.23e-29;53!CL:0000954;1.40e-14;2!UBERON:0004872;6.84e-09;7!UBERON:0001045;1.18e-07;1 | |||
|ontology_enrichment_disease=DOID:0060058!2.74e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.35e-24;10!DOID:0060073;2.70e-08;1!DOID:8675;2.70e-08;1!DOID:630;2.89e-08;1!DOID:0050177;2.89e-08;1!DOID:0050427;2.89e-08;1!DOID:2355;3.32e-08;1!DOID:4960;6.97e-08;1!DOID:0070004;6.97e-08;1!DOID:12603;1.18e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.93e-24,10;DOID:2531,4.19e-09,51;DOID:0060083,4.19e-09,51;DOID:0060073,2.70e-08,1;DOID:8675,2.70e-08,1;DOID:630,2.89e-08,1;DOID:0050177,2.89e-08,1;DOID:0050427,2.89e-08,1;DOID:2355,3.32e-08,1;DOID:4960,6.97e-08,1;DOID:0070004,6.97e-08,1;DOID:12603,1.11e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.35e-17!115;UBERON:0000178!1.85e-11!15;UBERON:0000179!1.85e-11!15;UBERON:0000463!1.85e-11!15;UBERON:0002106!2.22e-08!3;UBERON:0004854!2.22e-08!3;UBERON:0009034!2.22e-08!3;UBERON:0002095!2.22e-08!3;UBERON:0004782!2.22e-08!3;UBERON:0003281!2.22e-08!3;UBERON:0009664!2.22e-08!3;UBERON:0002296!2.22e-08!3;UBERON:0005602!2.22e-08!3;UBERON:0001179!2.22e-08!3;UBERON:0006293!2.22e-08!3;UBERON:0004177!2.41e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.04e-09;3!UBERON:0002372;9.10e-08;1!UBERON:0001961;9.10e-08;1!UBERON:0001744;9.10e-08;1!UBERON:0001042;9.10e-08;1!UBERON:0001735;9.10e-08;1!UBERON:0000029;1.18e-07;1!UBERON:0001154;1.18e-07;1!UBERON:0001153;1.18e-07;1!UBERON:0009854;1.18e-07;1!UBERON:0002193;1.44e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,9.72e-10,3;UBERON:0004854,9.72e-10,3;UBERON:0009034,9.72e-10,3;UBERON:0002095,9.72e-10,3;UBERON:0004782,9.72e-10,3;UBERON:0003281,9.72e-10,3;UBERON:0009664,9.72e-10,3;UBERON:0002296,9.72e-10,3;UBERON:0005602,9.72e-10,3;UBERON:0001179,9.72e-10,3;UBERON:0006293,9.72e-10,3;UBERON:0002372,9.10e-08,1;UBERON:0001961,9.10e-08,1;UBERON:0001744,9.10e-08,1;UBERON:0001735,9.10e-08,1;UBERON:0000029,1.04e-07,1;UBERON:0001154,1.18e-07,1;UBERON:0001153,1.18e-07,1;UBERON:0001045,1.18e-07,1 | |||
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| ||
|short_description=p1@CU689419 | |||
}} | }} |
Latest revision as of 18:04, 23 July 2015
Short description: | p1@CU689419 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU689419_5end |
Coexpression cluster: | C442_diffuse_xeroderma_lymphoma_Burkitt_plasma_b_lymphangiectasia |
Association with transcript: | 171bp_to_CU689419_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.41e-105 | 24 |
pro-B cell | 7.41e-105 | 24 |
lymphocyte | 3.76e-50 | 53 |
common lymphoid progenitor | 3.76e-50 | 53 |
lymphoid lineage restricted progenitor cell | 2.70e-46 | 52 |
B cell | 7.01e-44 | 14 |
nongranular leukocyte | 1.19e-20 | 115 |
precursor B cell | 1.26e-20 | 3 |
hematopoietic lineage restricted progenitor cell | 1.32e-17 | 120 |
leukocyte | 7.71e-17 | 136 |
mature B cell | 1.44e-14 | 2 |
pre-B-II cell | 1.44e-14 | 2 |
transitional stage B cell | 1.44e-14 | 2 |
small pre-B-II cell | 1.44e-14 | 2 |
immature B cell | 1.44e-14 | 2 |
hematopoietic oligopotent progenitor cell | 1.37e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.37e-13 | 161 |
hematopoietic stem cell | 7.49e-13 | 168 |
hematopoietic cell | 5.46e-12 | 177 |
B-1 B cell | 2.70e-08 | 1 |
antibody secreting cell | 5.70e-08 | 1 |
plasma cell | 5.70e-08 | 1 |
plasmablast | 5.70e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 9.72e-10 | 3 |
gastrointestinal system mesentery | 9.72e-10 | 3 |
stomach region | 9.72e-10 | 3 |
mesentery | 9.72e-10 | 3 |
gastrointestinal system serosa | 9.72e-10 | 3 |
mesentery of stomach | 9.72e-10 | 3 |
gut mesentery | 9.72e-10 | 3 |
dorsal mesentery | 9.72e-10 | 3 |
dorsal mesogastrium | 9.72e-10 | 3 |
peritoneal cavity | 9.72e-10 | 3 |
spleen primordium | 9.72e-10 | 3 |
tonsil | 9.10e-08 | 1 |
mucosa-associated lymphoid tissue | 9.10e-08 | 1 |
lymphoid tissue | 9.10e-08 | 1 |
tonsillar ring | 9.10e-08 | 1 |
lymph node | 1.04e-07 | 1 |
vermiform appendix | 1.18e-07 | 1 |
caecum | 1.18e-07 | 1 |
midgut | 1.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.93e-24 | 10 |
hematologic cancer | 4.19e-09 | 51 |
immune system cancer | 4.19e-09 | 51 |
lymphatic system cancer | 2.70e-08 | 1 |
lymphosarcoma | 2.70e-08 | 1 |
genetic disease | 2.89e-08 | 1 |
monogenic disease | 2.89e-08 | 1 |
xeroderma pigmentosum | 2.89e-08 | 1 |
anemia | 3.32e-08 | 1 |
bone marrow cancer | 6.97e-08 | 1 |
myeloma | 6.97e-08 | 1 |
acute leukemia | 1.11e-07 | 1 |