FFCP PHASE1:Hg19::chr19:10983098..10983110,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:10983098..10983110,+ | |||
|description=CAGE_peak_at_chr19:10983098..10983110,+ | |description=CAGE_peak_at_chr19:10983098..10983110,+ | ||
|id=chr19:10983098..10983110,+ | |id=chr19:10983098..10983110,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.51e-13!180;CL:0000680!1.22e-10!57;CL:0000056!1.22e-10!57;CL:0000355!1.22e-10!57;CL:0000187!1.83e-10!54;CL:0000183!5.26e-10!59;CL:0000393!1.13e-09!60;CL:0000211!1.13e-09!60;CL:0000192!9.22e-08!42;CL:0000514!9.22e-08!42;CL:0002551!5.17e-07!6 | |ontology_enrichment_celltype=CL:0000055!7.51e-13!180;CL:0000680!1.22e-10!57;CL:0000056!1.22e-10!57;CL:0000355!1.22e-10!57;CL:0000187!1.83e-10!54;CL:0000183!5.26e-10!59;CL:0000393!1.13e-09!60;CL:0000211!1.13e-09!60;CL:0000192!9.22e-08!42;CL:0000514!9.22e-08!42;CL:0002551!5.17e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002367;1.42e-36;2!CL:0002600;1.72e-10;2!CL:0002592;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002367,9.84e-37,2;CL:0002600,1.72e-10,2;CL:0002592,2.63e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.30e-19;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;2.72e-10;2!DOID:962;2.72e-10;2!DOID:1192;2.79e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,2.72e-10,2;DOID:962,2.72e-10,2;DOID:1192,2.79e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004290!2.94e-12!70;UBERON:0000914!8.17e-12!83;UBERON:0002329!8.17e-12!83;UBERON:0003077!8.17e-12!83;UBERON:0003059!8.17e-12!83;UBERON:0007282!8.17e-12!83;UBERON:0009618!8.17e-12!83;UBERON:0007285!8.17e-12!83;UBERON:0000486!3.87e-11!82;UBERON:0001134!1.66e-09!61;UBERON:0002036!1.66e-09!61;UBERON:0003082!1.66e-09!61;UBERON:0002385!5.36e-09!63;UBERON:0001015!5.36e-09!63;UBERON:0000383!5.36e-09!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0005969;1.42e-36;2!UBERON:0003956;1.42e-36;2!UBERON:0002203;6.50e-13;6!UBERON:0001768;6.50e-13;6!UBERON:0002200;6.50e-13;6!UBERON:0003714;2.72e-10;2!UBERON:0002331;2.82e-08;10!UBERON:0006876;1.84e-07;11!UBERON:0000478;1.97e-07;24!UBERON:0003498;2.79e-07;3!UBERON:0005985;2.79e-07;3!UBERON:0001621;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,9.84e-37,2;UBERON:0003956,9.84e-37,2;UBERON:0002203,5.76e-13,6;UBERON:0001768,5.76e-13,6;UBERON:0002200,5.76e-13,6;UBERON:0003714,2.72e-10,2;UBERON:0002331,2.82e-08,10;UBERON:0000358,2.82e-08,10;UBERON:0000307,2.82e-08,10;UBERON:0000091,2.82e-08,10;UBERON:0000087,2.82e-08,10;UBERON:0007010,2.82e-08,10;UBERON:0007806,2.82e-08,10;UBERON:0008780,2.82e-08,10;UBERON:0005728,2.82e-08,10;UBERON:0006876,1.73e-07,11;UBERON:0000478,2.06e-07,24;UBERON:0001621,2.63e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0,0,0,0.382067028739756,0.410502947249729,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0.298897361103602,0.23486899728753,0.323745888736263,0,0,0,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0.113432183160021,0.358779271377724,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0,0.323292113637624,0,0,0.169560592310488,0,0.272746120590835,0,0,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0.601892199455438,0,0,0,0,0.347534457872331,0.195801157462741,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0.307007349452259,0,0,0.145016693914229,0.340906509664404,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.767693373934002,0,0.636406495851874,0,0,0,0.117812402345686,0.606547444719948,1.58510321173008,0,0.48763373908959,0,0,0.409499734223957,0.282810863907425,0,1.65409603063837,0,0,2.31510213706675,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0.709522128141196,0,0,1.89736586882858,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.320472213382419,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0,0.615424027305347,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07564790076435,0.86494757262552,0.626531697032732,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.347119476670262,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,1.017074150619,0,0,0.326587360109409,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,1.11728983594649,0.318004350653419,3.5487785250564,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0.581207126840626,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0.473314686579554,0,0,0,0.743990036333503,0,0.432626562123789,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0.813792356631477,0,0,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0,0,0,0.382067028739756,0.410502947249729,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0.298897361103602,0.23486899728753,0.323745888736263,0,0,0,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0.113432183160021,0.358779271377724,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0,0.323292113637624,0,0,0.169560592310488,0,0.272746120590835,0,0,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0.601892199455438,0,0,0,0,0.347534457872331,0.195801157462741,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0.307007349452259,0,0,0.145016693914229,0.340906509664404,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.767693373934002,0,0.636406495851874,0,0,0,0.117812402345686,0.606547444719948,1.58510321173008,0,0.48763373908959,0,0,0.409499734223957,0.282810863907425,0,1.65409603063837,0,0,2.31510213706675,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0.709522128141196,0,0,1.89736586882858,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.320472213382419,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0,0.615424027305347,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07564790076435,0.86494757262552,0.626531697032732,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.347119476670262,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,1.017074150619,0,0,0.326587360109409,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,1.11728983594649,0.318004350653419,3.5487785250564,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0.581207126840626,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0.473314686579554,0,0,0,0.743990036333503,0,0.432626562123789,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0.813792356631477,0,0,0.961705476909699 | ||
|short_description=p@chr19:10983098..10983110,+ | |short_description=p@chr19:10983098..10983110,+ | ||
}} | }} |
Latest revision as of 03:17, 26 July 2015
Short description: | p@chr19:10983098..10983110, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:10983098..10983110, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trabecular meshwork cell | 9.84e-37 | 2 |
smooth muscle cell of trachea | 1.72e-10 | 2 |
smooth muscle cell of the coronary artery | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 9.84e-37 | 2 |
aqueous drainage system | 9.84e-37 | 2 |
vasculature of eye | 5.76e-13 | 6 |
uvea | 5.76e-13 | 6 |
vasculature of head | 5.76e-13 | 6 |
neural tissue | 2.72e-10 | 2 |
umbilical cord | 2.82e-08 | 10 |
blastocyst | 2.82e-08 | 10 |
blastula | 2.82e-08 | 10 |
bilaminar disc | 2.82e-08 | 10 |
inner cell mass | 2.82e-08 | 10 |
cleaving embryo | 2.82e-08 | 10 |
connecting stalk | 2.82e-08 | 10 |
inner cell mass derived epiblast | 2.82e-08 | 10 |
extraembryonic mesoderm | 2.82e-08 | 10 |
vasculature of organ | 1.73e-07 | 11 |
extraembryonic structure | 2.06e-07 | 24 |
coronary artery | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 2.72e-10 | 2 |
neurofibroma | 2.72e-10 | 2 |
peripheral nervous system neoplasm | 2.79e-07 | 3 |