FFCP PHASE1:Hg19::chr19:30433372..30433456,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8725 | |EntrezGene=8725 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13236 | |HGNC=13236 | ||
|TSSclassifier=strong | |||
|UniProt=F8W9T0,O94763,Q6NX55 | |UniProt=F8W9T0,O94763,Q6NX55 | ||
|association_with_transcript=0bp_to_ENST00000312051,ENST00000542441,NM_134447,uc002nsr.2,uc002nss.2_5end | |association_with_transcript=0bp_to_ENST00000312051,ENST00000542441,NM_134447,uc002nsr.2,uc002nss.2_5end | ||
|cluster_id=chr19:30433372..30433456,+ | |||
|description=CAGE_peak_2_at_URI1_5end | |description=CAGE_peak_2_at_URI1_5end | ||
|id=chr19:30433372..30433456,+ | |id=chr19:30433372..30433456,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.37e-25!239;DOID:162!3.22e-25!235;DOID:0050686!2.30e-17!137;DOID:0050687!1.91e-11!143;DOID:8692!3.06e-11!31;DOID:1240!2.19e-08!39;DOID:2531!7.23e-08!51;DOID:0060083!7.23e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.58e-11;31!DOID:1240;6.74e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.49e-25,239;DOID:162,3.39e-25,235;DOID:0050686,2.44e-17,137;DOID:0050687,1.89e-11,143;DOID:8692,3.03e-11,31;DOID:1240,2.17e-08,39;DOID:2531,7.75e-08,51;DOID:0060083,7.75e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.24e-07!57;UBERON:0005068!2.24e-07!57;UBERON:0006241!2.24e-07!57;UBERON:0007135!2.24e-07!57;UBERON:0000955!3.00e-07!69;UBERON:0006238!3.00e-07!69;UBERON:0000033!9.33e-07!123 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.03e-07,56;UBERON:0005068,1.03e-07,56;UBERON:0006241,1.03e-07,56;UBERON:0007135,1.03e-07,56;UBERON:0000073,1.37e-07,53;UBERON:0002616,1.37e-07,53;UBERON:0000955,1.53e-07,68;UBERON:0006238,1.53e-07,68;UBERON:0010314,3.30e-07,132;UBERON:0001016,8.11e-07,89 | |||
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| ||
|short_description=p2@URI1 | |short_description=p2@URI1 | ||
}} | }} |
Latest revision as of 04:01, 17 September 2015
Short description: | p2@URI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_URI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000312051, ENST00000542441, NM_134447, uc002nsr.2, uc002nss.2_5end |
EntrezGene: | URI1 |
HGNC: | 13236 |
UniProt: | F8W9T0O94763Q6NX55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.03e-07 | 56 |
neural rod | 1.03e-07 | 56 |
future spinal cord | 1.03e-07 | 56 |
neural keel | 1.03e-07 | 56 |
regional part of nervous system | 1.37e-07 | 53 |
regional part of brain | 1.37e-07 | 53 |
brain | 1.53e-07 | 68 |
future brain | 1.53e-07 | 68 |
structure with developmental contribution from neural crest | 3.30e-07 | 132 |
nervous system | 8.11e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.49e-25 | 239 |
cancer | 3.39e-25 | 235 |
organ system cancer | 2.44e-17 | 137 |
cell type cancer | 1.89e-11 | 143 |
myeloid leukemia | 3.03e-11 | 31 |
leukemia | 2.17e-08 | 39 |
hematologic cancer | 7.75e-08 | 51 |
immune system cancer | 7.75e-08 | 51 |