FFCP PHASE1:Hg19::chr11:1948845..1948856,+: Difference between revisions
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|id=chr11:1948845..1948856,+
|short_description=p@chr11:1948845..1948856,+
|description=CAGE_peak_at_chr11:1948845..1948856,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:1948845..1948856,+ | |||
|coexpression_cluster_id=C3128 | |||
|description=CAGE_peak_at_chr11:1948845..1948856,+ | |||
|id=chr11:1948845..1948856,+ | |||
|ontology_enrichment_celltype=CL:0002537!1.38e-15!5;CL:0000349!7.92e-12!3;CL:0002577!7.92e-12!3;CL:0002541!1.43e-11!3;CL:1001319!1.56e-09!1;CL:1000600!1.56e-09!1;CL:0002251!1.99e-09!21;CL:0002336!4.50e-09!1;CL:0002261!4.50e-09!1;CL:0002170!4.50e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.60e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.60e-14,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.42e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.48e-20;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.48e-20,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!9.87e-28!14;UBERON:0000158!9.87e-28!14;UBERON:0003729!6.64e-26!5;UBERON:0004923!1.17e-21!57;UBERON:0000478!1.20e-20!24;UBERON:0003343!6.56e-19!4;UBERON:0004785!6.56e-19!4;UBERON:0003124!1.32e-18!7;UBERON:0001255!1.91e-17!2;UBERON:0001556!1.91e-17!2;UBERON:0000344!1.15e-16!12;UBERON:0000476!1.43e-11!3;UBERON:0000920!1.43e-11!3;UBERON:0000305!2.76e-11!7;UBERON:0004871!6.17e-10!8;UBERON:0004645!1.56e-09!1;UBERON:0001256!1.56e-09!1;UBERON:0001259!1.56e-09!1;UBERON:0001987!4.33e-09!4;UBERON:0004340!4.33e-09!4;UBERON:0000974!7.08e-08!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;7.35e-18;4!UBERON:0004785;7.35e-18;4!UBERON:0000974;2.19e-12;6!UBERON:0000305;8.99e-11;7!UBERON:0005631;6.13e-08;10!UBERON:0000158;6.13e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,7.35e-18,4;UBERON:0004785,7.35e-18,4;UBERON:0000305,8.99e-11,7;UBERON:0004871,1.35e-09,8;UBERON:0000974,5.73e-08,10 | |||
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|short_description=p@chr11:1948845..1948856,+ | |||
}} | }} |
Latest revision as of 20:49, 23 July 2015
Short description: | p@chr11:1948845..1948856, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1948845..1948856, + |
Coexpression cluster: | C3128_oral_amniotic_chorionic_squamous_Placental_Mesenchymal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.60e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 7.35e-18 | 4 |
respiratory system mucosa | 7.35e-18 | 4 |
amnion | 8.99e-11 | 7 |
somatic layer of lateral plate mesoderm | 1.35e-09 | 8 |
neck | 5.73e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.48e-20 | 14 |