FFCP PHASE1:Hg19::chr11:2016960..2016996,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:2016960..2016996,-
|short_description=p20@H19
|description=CAGE_peak_20_at_H19_5end
|association_with_transcript=-157bp_to_BC010185_5end
|EntrezGene=2831...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283120 | |EntrezGene=283120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-157bp_to_BC010185_5end | |||
|cluster_id=chr11:2016960..2016996,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_20_at_H19_5end | |||
|id=chr11:2016960..2016996,- | |||
|ontology_enrichment_celltype=CL:0000188!3.42e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.51e-18;19!CL:0002577;6.13e-08;3!CL:0002541;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.43e-18,19;CL:0002577,6.15e-08,3;CL:0002541,7.70e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.47e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.47e-12!14;UBERON:0000158!1.47e-12!14;UBERON:0001557!3.73e-12!19;UBERON:0000478!4.71e-12!24;UBERON:0003104!1.25e-11!238;UBERON:0009142!1.25e-11!238;UBERON:0001737!8.16e-11!9;UBERON:0004119!1.75e-10!169;UBERON:0000925!1.75e-10!169;UBERON:0006595!1.75e-10!169;UBERON:0004921!9.21e-10!129;UBERON:0004185!9.21e-10!129;UBERON:0000077!1.15e-09!130;UBERON:0003124!1.72e-09!7;UBERON:0000481!2.73e-09!347;UBERON:0001007!7.20e-09!155;UBERON:0001555!7.20e-09!155;UBERON:0007026!7.20e-09!155;UBERON:0001041!7.53e-09!98;UBERON:0004923!1.37e-07!57;UBERON:0003103!8.48e-07!69;UBERON:0000468!9.30e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.26e-18;24!UBERON:0001737;2.43e-18;9!UBERON:0001557;2.43e-18;9!UBERON:0005631;1.51e-14;10!UBERON:0000158;1.51e-14;10!UBERON:0001134;4.60e-11;16!UBERON:0002036;4.60e-11;16!UBERON:0001987;8.24e-10;4!UBERON:0000305;1.01e-08;7!UBERON:0000922;2.62e-08;49!UBERON:0003124;7.02e-08;3!UBERON:0000920;7.02e-08;3!UBERON:0001723;1.20e-07;3!UBERON:0001033;1.20e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.96e-22,14;UBERON:0000158,1.96e-22,14;UBERON:0000478,1.22e-18,24;UBERON:0001737,2.18e-18,9;UBERON:0003124,5.57e-16,7;UBERON:0001557,3.08e-14,19;UBERON:0001987,8.00e-10,4;UBERON:0004340,8.00e-10,4;UBERON:0004119,1.75e-09,160;UBERON:0000925,1.75e-09,160;UBERON:0006595,1.75e-09,160;UBERON:0004921,2.09e-09,118;UBERON:0001041,2.72e-09,87;UBERON:0000305,1.01e-08,7;UBERON:0000920,7.70e-08,3;UBERON:0000072,7.88e-08,47;UBERON:0001723,1.12e-07,3;UBERON:0001033,1.12e-07,3;UBERON:0010056,1.12e-07,3;UBERON:0004871,1.48e-07,8;UBERON:0001007,1.71e-07,145;UBERON:0001555,1.71e-07,145;UBERON:0007026,1.71e-07,145;UBERON:0000065,3.48e-07,54 | |||
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| ||
|short_description=p20@H19 | |||
}} | }} |
Latest revision as of 06:17, 17 September 2015
Short description: | p20@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -157bp_to_BC010185_5end |
EntrezGene: | H19 |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.43e-18 | 19 |
placental epithelial cell | 6.15e-08 | 3 |
chorionic membrane mesenchymal stem cell | 7.70e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.96e-22 | 14 |
membranous layer | 1.96e-22 | 14 |
extraembryonic structure | 1.22e-18 | 24 |
larynx | 2.18e-18 | 9 |
chorion | 5.57e-16 | 7 |
upper respiratory tract | 3.08e-14 | 19 |
placenta | 8.00e-10 | 4 |
allantois | 8.00e-10 | 4 |
endoderm-derived structure | 1.75e-09 | 160 |
endoderm | 1.75e-09 | 160 |
presumptive endoderm | 1.75e-09 | 160 |
subdivision of digestive tract | 2.09e-09 | 118 |
foregut | 2.72e-09 | 87 |
amnion | 1.01e-08 | 7 |
egg chorion | 7.70e-08 | 3 |
segment of respiratory tract | 7.88e-08 | 47 |
tongue | 1.12e-07 | 3 |
gustatory system | 1.12e-07 | 3 |
future tongue | 1.12e-07 | 3 |
somatic layer of lateral plate mesoderm | 1.48e-07 | 8 |
digestive system | 1.71e-07 | 145 |
digestive tract | 1.71e-07 | 145 |
primitive gut | 1.71e-07 | 145 |
respiratory tract | 3.48e-07 | 54 |